RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 TUSC5Q8IXB3 177 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 C11orf53Q8IXP5 236 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 ZNF645Q8N7E2 425 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 OR1K1Q8NGR3 316 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 OR1P1Q8NH06 330 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 OR52E5Q8NH55 327 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 SCGB1C1Q8TD33 95 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 PACRGQ96M98 296 aaPredicted RBP5.71□□□□□ -1.5
UBR4-212ENST00000475973 JSRP1Q96MG2 331 aaPredicted RBP5.71□□□□□ -1.5
UBR4-212ENST00000475973 VKORC1Q9BQB6 163 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 TMEM147Q9BVK8 224 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 MAP1LC3BQ9GZQ8 125 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 RBKSQ9H477 322 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 NCOR1P1Q9H4R4 102 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 TUBG2Q9NRH3 451 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 OR6C3Q9NZP0 311 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 WDR83OSQ9Y284 106 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 ZNF835Q9Y2P0 537 aa5.71□□□□□ -1.5
UBR4-212ENST00000475973 USP9XQ93008 2570 aaPredicted RBP5.71□□□□□ -1.5
UBR4-212ENST00000475973 DOPEY1Q5JWR5 2465 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 NBASA2RRP1 2371 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 A0A1B0GV50 99 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 ANKRD30BLA7E2S9 258 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 IFNL4K9M1U5 179 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 ITGB1BP1O14713 200 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 PROP1O75360 226 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 RHBDL1O75783 438 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 NXPH2O95156 264 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 HRASP01112 189 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 CD55P08174 381 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 METTL15P1P0C7V9 234 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 RAC2P15153 192 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 GDF1P27539 372 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 DDTP30046 118 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 PSMB3P49720 205 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 COL10A1Q03692 680 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 IZUMO4Q1ZYL8 232 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 C9orf152Q5JTZ5 239 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 LCN15Q6UWW0 184 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 MRPL52Q86TS9 123 aaKnown RBP5.7□□□□□ -1.5
UBR4-212ENST00000475973 FAM90A1Q86YD7 464 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 SCCPDHQ8NBX0 429 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 FAM57AQ8TBR7 257 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 BTF3L4Q96K17 158 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 LURAP1Q96LR2 239 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 ZNF488Q96MN9 340 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 HIST1H2AAQ96QV6 131 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 PARLQ9H300 379 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 UFSP2Q9NUQ7 469 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 POLDIP2Q9Y2S7 368 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 UNC79Q9P2D8 2635 aa5.7□□□□□ -1.5
UBR4-212ENST00000475973 TRAV9-1A0A075B6T8 112 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 ODAMA1E959 279 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 C15orf62A8K5M9 175 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 FAM166BA8MTA8 275 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 H3BP45 60 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 C15orf65H3BRN8 121 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 RBFOX2O43251 390 aaKnown RBP eCLIP5.69□□□□□ -1.54e-7■□□□□ 10.5
UBR4-212ENST00000475973 TNFSF12O43508 249 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 YPEL1O60688 119 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 SMPD2O60906 423 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 THBDP07204 575 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 IL6RP08887 468 aaPredicted RBP5.69□□□□□ -1.5
UBR4-212ENST00000475973 FGF7P21781 194 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 CD1BP29016 333 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 CFHR2P36980 270 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 TAS2R60P59551 318 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 RAB4BP61018 213 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 SELENOTP62341 195 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 HTD2P86397 168 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 DEFA6Q01524 100 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 ACOT6Q3I5F7 207 aaPredicted RBP5.69□□□□□ -1.5
UBR4-212ENST00000475973 FBXW9Q5XUX1 488 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 NCR3LG1Q68D85 454 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 C16orf82Q7Z2V1 217 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 DOLPP1Q86YN1 238 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 ZNF664Q8N3J9 261 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 C17orf78Q8N4C9 275 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 TMEM251Q8N6I4 163 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 OR51H1Q8NH63 302 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 RND1Q92730 232 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 RDH5Q92781 318 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 LHX4Q969G2 390 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 C11orf52Q96A22 123 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 APH1AQ96BI3 265 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 NEIL1Q96FI4 390 aaPredicted RBP5.69□□□□□ -1.5
UBR4-212ENST00000475973 WDYHV1Q96HA8 205 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 CIB3Q96Q77 187 aaPredicted RBP5.69□□□□□ -1.5
UBR4-212ENST00000475973 YPEL2Q96QA6 119 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 PFDN5Q99471 154 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 SMIM7Q9BQ49 75 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 NDUFAF3Q9BU61 184 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 RTL8AQ9BWD3 113 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 TTTY12Q9BZ98 90 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.69□□□□□ -1.5
UBR4-212ENST00000475973 SLC39A9Q9NUM3 307 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 B4GALT7Q9UBV7 327 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 LAMP3Q9UQV4 416 aa5.69□□□□□ -1.5
UBR4-212ENST00000475973 LSM4Q9Y4Z0 139 aaKnown RBP5.69□□□□□ -1.5
UBR4-212ENST00000475973 LY96Q9Y6Y9 160 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms