RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 VAMP1P23763 118 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 CNTFRP26992 372 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 LGALS7P47929 136 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 ARHGDIBP52566 201 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 F2RL1P55085 397 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 RPS16P62249 146 aaKnown RBP7.99□□□□□ -1.13
COL8A1-206ENST00000474648 LY6EQ16553 131 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 C4orf46Q504U0 113 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 DHRS7BQ6IAN0 325 aaPredicted RBP7.99□□□□□ -1.13
COL8A1-206ENST00000474648 LRTM2Q8N967 370 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 NPBQ8NG41 125 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 OR4C13Q8NGP0 309 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 OR4S2Q8NH73 311 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 OSR1Q8TAX0 266 aaPredicted RBP7.99□□□□□ -1.13
COL8A1-206ENST00000474648 ZNF431Q8TF32 576 aaPredicted RBP7.99□□□□□ -1.13
COL8A1-206ENST00000474648 CASTOR1Q8WTX7 329 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 MITD1Q8WV92 249 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 SSMEM1Q8WWF3 244 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 ESM1Q9NQ30 184 aa7.99□□□□□ -1.13
COL8A1-206ENST00000474648 A0A0A6YYJ9 748 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 C7orf66A4D0T2 115 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 PRAF2O60831 178 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 DUS4LO95620 317 aaKnown RBP7.98□□□□□ -1.13
COL8A1-206ENST00000474648 DHFRP00374 187 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 IGKV1-5P01602 117 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 HLA-AP01891 365 aaKnown RBP7.98□□□□□ -1.13
COL8A1-206ENST00000474648 P0C879 139 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 RPA2P15927 270 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 TMEM11P17152 192 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 SCGB2A2Q13296 93 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 HES1Q14469 280 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 PSG5Q15238 335 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 POU2AF1Q16633 256 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 MRGPRG-AS1Q2M3A8 158 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 C11orf88Q6PI97 169 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 Q6ZNX1 250 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 TMEM219Q86XT9 240 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 VKORC1L1Q8N0U8 176 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 TMEM86BQ8N661 226 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 OR5R1Q8NH85 324 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 SEC22AQ96IW7 307 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 RBM14Q96PK6 669 aaKnown RBP7.98□□□□□ -1.13
COL8A1-206ENST00000474648 ZFHX3Q15911 3703 aa7.98□□□□□ -1.13
COL8A1-206ENST00000474648 A0A0B4J2A0 478 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 SNRPGP15A8MWD9 76 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 CLDN34H7C241 214 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 SHOXO15266 292 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 CHST1O43916 411 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 OR2F2O95006 317 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 NDUFA3O95167 84 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 KRASP01116 189 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 AMY1AP04745 511 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 ANXA3P12429 323 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 NQO2P16083 231 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 G6PCP35575 357 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 TNP2Q05952 138 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 TATDN3Q17R31 274 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 TMEM268Q5VZI3 342 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 LIN54Q6MZP7 749 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 LYZL2Q7Z4W2 148 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 ZNF695Q8IW36 515 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 PUSL1Q8N0Z8 303 aaKnown RBP7.97□□□□□ -1.13
COL8A1-206ENST00000474648 CADM3Q8N126 398 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 LGI3Q8N145 548 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 Q8N9W7 124 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 RBPMSQ93062 196 aaKnown RBP7.97□□□□□ -1.13
COL8A1-206ENST00000474648 IL22RA2Q969J5 263 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 R3HDM4Q96D70 268 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 TSNAXQ99598 290 aaKnown RBP7.97□□□□□ -1.13
COL8A1-206ENST00000474648 CHIAQ9BZP6 476 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 TNFRSF19Q9NS68 423 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 COMMD9Q9P000 198 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 SHPKQ9UHJ6 478 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 ALG5Q9Y673 324 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 POMT1Q9Y6A1 747 aa7.97□□□□□ -1.13
COL8A1-206ENST00000474648 TRAV3A0A0B4J244 114 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 A0A0G2JRQ6 117 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 DNAJC9-AS1A6NH13 148 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 DBX1A6NMT0 343 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 FCN1O00602 326 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 RRHO14718 337 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 NBR2O15453 112 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 HRASP01112 189 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 SAA1P0DJI8 122 aaPredicted RBP7.96□□□□□ -1.14
COL8A1-206ENST00000474648 HILS1P60008 231 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 UBE2KP61086 200 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 SRPXP78539 464 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 CBX3Q13185 183 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 C2orf68Q2NKX9 166 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 RBMS3Q6XE24 437 aaKnown RBP7.96□□□□□ -1.14
COL8A1-206ENST00000474648 Q6ZRM9 215 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 SSX9Q7RTT3 188 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 C12orf45Q8N5I9 185 aaPredicted RBP7.96□□□□□ -1.14
COL8A1-206ENST00000474648 FAM71E2Q8N5Q1 922 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 SLC35G3Q8N808 338 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 TEX45Q8NA69 505 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 OR8H1Q8NGG4 311 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 ZNF418Q8TF45 676 aaPredicted RBP7.96□□□□□ -1.14
COL8A1-206ENST00000474648 GPR146Q96CH1 333 aa7.96□□□□□ -1.14
COL8A1-206ENST00000474648 RHOVQ96L33 236 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms