RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ZC4H2Q9NQZ6 224 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 YAE1D1Q9NRH1 226 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 TMEM140Q9NV12 185 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 C1RLQ9NZP8 487 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 CACNG5Q9UF02 275 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 LSM5Q9Y4Y9 91 aaKnown RBP8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 CENPEQ02224 2701 aa8.31□□□□□ -1.08
PRPF38A-202ENST00000474048 CELSR2Q9HCU4 2923 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 A0A1W2PPI3 338 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 FAM90A9PA6NNJ1 464 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 LY6LH3BQJ8 138 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 ST8SIA3O43173 380 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 CD5LO43866 347 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 PROP1O75360 226 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 SPDEFO95238 335 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 IFNA17P01571 189 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 IGKV1D-33P01593 117 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 IGKV1-33P01594 117 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 TMEM11P17152 192 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 NKX2-1P43699 371 aaPredicted RBP8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 H2BFSP57053 126 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 LINC00205P59089 165 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 DIAPH2-AS1Q14236 149 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 MMDQ15546 238 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 OR4A5Q8NH83 315 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 RNF5Q99942 180 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 FKBP11Q9NYL4 201 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 PITPNC1Q9UKF7 332 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 PRNDQ9UKY0 176 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 FBN2P35556 2912 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 POLQO75417 2590 aa8.3□□□□□ -1.08
PRPF38A-202ENST00000474048 FXYD6-FXYD2A0A087WZ82 144 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 NCBP2LA6PVI3 153 aaKnown RBP8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 CEBPZOSA8MTT3 80 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 OR2A4O95047 310 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 VENTXO95231 258 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 IGKV1-16P04430 117 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 SNRNP70P08621 437 aaKnown RBP8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 FGF2P09038 288 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 IGHV4-38-2P0DP08 117 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 C4BPBP20851 252 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 PSMB6P28072 239 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 HNF4GQ14541 408 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 C2orf68Q2NKX9 166 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 LRRC75BQ2VPJ9 315 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 NMSQ5H8A3 153 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 OR4A47Q6IF82 309 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 RBMS3Q6XE24 437 aaKnown RBP8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 INO80EQ8NBZ0 244 aaPredicted RBP8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 PPP1R1CQ8WVI7 109 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 DCUN1D4Q92564 292 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 GPR146Q96CH1 333 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 OR10C1Q96KK4 312 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 FYTTD1Q96QD9 318 aaKnown RBP8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 OR2A7Q96R45 310 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 NEURL2Q9BR09 285 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 COMMD5Q9GZQ3 224 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 COA4Q9NYJ1 87 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 PRRC2AP48634 2157 aaKnown RBP8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 APCP25054 2843 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 ABCA2Q9BZC7 2435 aa8.29□□□□□ -1.08
PRPF38A-202ENST00000474048 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.29□□□□□ -1.081e-6■■■■■ 28.7
PRPF38A-202ENST00000474048 TACC2O95359 2948 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 A0A0U1RQK1 487 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 FAM90A26D6RGX4 464 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 NBR2O15453 112 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 SLC25A17O43808 307 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 GPR137BO60478 399 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 KBTBD11O94819 623 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 NXPH3O95157 252 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 LY86O95711 162 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 IGKV1-39P01597 117 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 IGKV1-5P01602 117 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 C1QBP02746 253 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 IGKV1D-39P04432 117 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 SAA1P0DJI8 122 aaPredicted RBP8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 HOXA1P49639 335 aaPredicted RBP8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 EIF2B2P49770 351 aaKnown RBP8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 F2RL1P55085 397 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 OR2B8PP59922 312 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 UBE2KP61086 200 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 RPP30P78346 268 aaKnown RBP8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 C1orf229Q6ZS94 237 aaPredicted RBP8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 MMD2Q8IY49 270 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 VKORC1L1Q8N0U8 176 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 CIARTQ8N365 385 aaPredicted RBP8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 OR8H1Q8NGG4 311 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 ST6GAL2Q96JF0 529 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 HYLS1Q96M11 299 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 CIB3Q96Q77 187 aaPredicted RBP8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 HINT2Q9BX68 163 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 HIPK2Q9H2X6 1198 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 BET1LQ9NYM9 111 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 METTL1Q9UBP6 276 aaKnown RBP8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 POMT1Q9Y6A1 747 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 UNC79Q9P2D8 2635 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 HECTD1Q9ULT8 2610 aa8.28□□□□□ -1.08
PRPF38A-202ENST00000474048 C15orf61A6NNL5 157 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 MPTX1A8MV57 137 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms