RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 CD300LBA8K4G0 201 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF850A8MQ14 1090 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CEACAM18A8MTB9 384 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF736B4DX44 427 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 F5H5P2 479 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 H0YL77 283 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 SULT1C2O00338 296 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 SDCBPO00560 298 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 GEMIN2O14893 280 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 RRP8O43159 456 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 XRCC2O43543 280 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 SSNA1O43805 119 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF780AO75290 641 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 MRPL33O75394 65 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CA11O75493 328 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 RHBDL1O75783 438 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 RBBP9O75884 186 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 LYZL6O75951 148 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 SYNGR4O95473 234 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 RAB3DO95716 219 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 NAPSAO96009 420 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ACTL6AO96019 429 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CYB5AP00167 134 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CFDP00746 253 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CD8AP01732 235 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 HLA-AP01891 365 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 PMP2P02689 132 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 TFF1P04155 84 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 IL5P05113 134 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ERCC1P07992 297 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 FCGR3AP08637 254 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 GIPP09681 153 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CECR9P0C854 216 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 UBBP0CG47 229 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 DUX4L2P0CJ85 424 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 DUX4L3P0CJ86 424 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 DUX4L5P0CJ88 424 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 DUX4L6P0CJ89 424 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 DUX4L7P0CJ90 424 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 COX5BP10606 129 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CD79AP11912 226 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ANXA3P12429 323 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ICAM2P13598 275 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CPN1P15169 458 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 PSMB1P20618 241 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CCNOP22674 350 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 GABRR1P24046 479 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 FKBP2P26885 142 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CALCRP30988 508 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 PRSS3P35030 304 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OPRM1P35372 400 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 MPV17P39210 176 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ID1P41134 155 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 HTR2BP41595 481 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 PTGFRP43088 359 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 IER3P46695 156 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CEBPDP49716 269 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 MEOX2P50222 304 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 IDH3GP51553 393 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CCL11P51671 97 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 GPM6AP51674 278 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ATP1B3P54709 279 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 RBM11P57052 281 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 TAS2R19P59542 299 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 GNG2P59768 71 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ACTBP60709 375 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 FGF12P61328 243 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ACTG1P63261 375 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 MRPS15P82914 257 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 PITPNAQ00169 270 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 SSBP1Q04837 148 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ECH1Q13011 328 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF154Q13106 437 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 PRDX4Q13162 271 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 DHRS2Q13268 280 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 MAB21L1Q13394 359 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 SNTB2Q13425 540 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 EBI3Q14213 229 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 SLC10A1Q14973 349 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 HERPUD1Q15011 391 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ZMYND11Q15326 602 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 STK11Q15831 433 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 GRK1Q15835 563 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 GABRA6Q16445 453 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 TAF9Q16594 264 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ANKRD55Q3KP44 614 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 LGALSLQ3ZCW2 172 aaPredicted RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CDNFQ49AH0 187 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 SCGB2B2Q4G0G5 96 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 CLVS2Q5SYC1 327 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 C9orf129Q5T035 196 aaKnown RBP1.06□□□□□ -2.24
CCDC39-203ENST00000473854 C6orf183Q5T699 404 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 C1orf185Q5T7R7 199 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 PRAMEF6Q5VXH4 476 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 FBXW9Q5XUX1 488 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OR2T2Q6IF00 324 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM53Q6P2H8 277 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF880Q6PDB4 577 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 DUX4L9Q6RFH8 374 aaPredicted RBP1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms