RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 GNB4Q9HAV0 340 aa14.75□□□□□ -0.05
PTCD3-210ENST00000473829 SCOCQ9UIL1 159 aa14.75□□□□□ -0.05
PTCD3-210ENST00000473829 FOXA2Q9Y261 457 aaPredicted RBP14.75□□□□□ -0.05
PTCD3-210ENST00000473829 CEPT1Q9Y6K0 416 aa14.75□□□□□ -0.05
PTCD3-210ENST00000473829 TNCP24821 2201 aa14.74□□□□□ -0.05
PTCD3-210ENST00000473829 SULT1C2O00338 296 aa14.74□□□□□ -0.05
PTCD3-210ENST00000473829 RGS5O15539 181 aa14.74□□□□□ -0.05
PTCD3-210ENST00000473829 IGLL1P15814 213 aa14.74□□□□□ -0.05
PTCD3-210ENST00000473829 SLC6A1P30531 599 aa14.74□□□□□ -0.05
PTCD3-210ENST00000473829 VMA21Q3ZAQ7 101 aa14.74□□□□□ -0.05
PTCD3-210ENST00000473829 VKORC1L1Q8N0U8 176 aa14.74□□□□□ -0.05
PTCD3-210ENST00000473829 TEX45Q8NA69 505 aa14.74□□□□□ -0.05
PTCD3-210ENST00000473829 OR52I2Q8NH67 350 aa14.74□□□□□ -0.05
PTCD3-210ENST00000473829 OR4S2Q8NH73 311 aa14.74□□□□□ -0.05
PTCD3-210ENST00000473829 DCUN1D5Q9BTE7 237 aa14.74□□□□□ -0.05
PTCD3-210ENST00000473829 DNAH3Q8TD57 4116 aa14.74□□□□□ -0.05
PTCD3-210ENST00000473829 PRKDCP78527 4128 aaKnown RBP14.73□□□□□ -0.05
PTCD3-210ENST00000473829 WIPF1O43516 503 aa14.73□□□□□ -0.05
PTCD3-210ENST00000473829 RAMP3O60896 148 aa14.73□□□□□ -0.05
PTCD3-210ENST00000473829 NOL3O60936 208 aaKnown RBP14.73□□□□□ -0.05
PTCD3-210ENST00000473829 CNIH1O95406 144 aa14.73□□□□□ -0.05
PTCD3-210ENST00000473829 GNRHRP30968 328 aa14.73□□□□□ -0.05
PTCD3-210ENST00000473829 RAB9AP51151 201 aa14.73□□□□□ -0.05
PTCD3-210ENST00000473829 PRSS8Q16651 343 aa14.73□□□□□ -0.05
PTCD3-210ENST00000473829 AKIRIN2Q53H80 203 aa14.73□□□□□ -0.05
PTCD3-210ENST00000473829 ACTBL2Q562R1 376 aa14.73□□□□□ -0.05
PTCD3-210ENST00000473829 ASPHD1Q5U4P2 390 aa14.73□□□□□ -0.05
PTCD3-210ENST00000473829 TMEM65Q6PI78 240 aa14.73□□□□□ -0.05
PTCD3-210ENST00000473829 TCTEX1D1Q8N7M0 179 aa14.73□□□□□ -0.05
PTCD3-210ENST00000473829 ZNF491Q8N8L2 437 aa14.73□□□□□ -0.05
PTCD3-210ENST00000473829 ZBTB34Q8NCN2 500 aa14.73□□□□□ -0.05
PTCD3-210ENST00000473829 C4orf3Q8WVX3 66 aa14.73□□□□□ -0.05
PTCD3-210ENST00000473829 KLK11Q9UBX7 282 aa14.73□□□□□ -0.05
PTCD3-210ENST00000473829 CCL24O00175 119 aa14.72□□□□□ -0.05
PTCD3-210ENST00000473829 MYCNOSP40205 109 aa14.72□□□□□ -0.05
PTCD3-210ENST00000473829 TMEM267Q0VDI3 215 aaPredicted RBP14.72□□□□□ -0.05
PTCD3-210ENST00000473829 KPRPQ5T749 579 aaPredicted RBP14.72□□□□□ -0.05
PTCD3-210ENST00000473829 SLIRPQ9GZT3 109 aaKnown RBP14.72□□□□□ -0.05
PTCD3-210ENST00000473829 ZNF430Q9H8G1 570 aaPredicted RBP14.72□□□□□ -0.05
PTCD3-210ENST00000473829 M0QYG6 137 aa14.71□□□□□ -0.05
PTCD3-210ENST00000473829 DGCR2P98153 550 aa14.71□□□□□ -0.05
PTCD3-210ENST00000473829 TNXAQ16473 311 aa14.71□□□□□ -0.05
PTCD3-210ENST00000473829 C10orf55Q5SWW7 151 aa14.71□□□□□ -0.05
PTCD3-210ENST00000473829 SPAG16Q8N0X2 631 aa14.71□□□□□ -0.05
PTCD3-210ENST00000473829 OR5M8Q8NGP6 311 aa14.71□□□□□ -0.05
PTCD3-210ENST00000473829 OR6F1Q8NGZ6 308 aa14.71□□□□□ -0.05
PTCD3-210ENST00000473829 OR51H1Q8NH63 302 aa14.71□□□□□ -0.05
PTCD3-210ENST00000473829 UBE2E2Q96LR5 201 aa14.71□□□□□ -0.05
PTCD3-210ENST00000473829 OR5B12Q96R08 314 aa14.71□□□□□ -0.05
PTCD3-210ENST00000473829 RBM38Q9H0Z9 239 aaKnown RBP14.71□□□□□ -0.05
PTCD3-210ENST00000473829 I3L521 148 aa14.7□□□□□ -0.06
PTCD3-210ENST00000473829 TPPPO94811 219 aa14.7□□□□□ -0.06
PTCD3-210ENST00000473829 APELAP0DMC3 54 aa14.7□□□□□ -0.06
PTCD3-210ENST00000473829 KIR2DS2P43631 304 aa14.7□□□□□ -0.06
PTCD3-210ENST00000473829 AADACL3Q5VUY0 350 aa14.7□□□□□ -0.06
PTCD3-210ENST00000473829 PUSL1Q8N0Z8 303 aaKnown RBP14.7□□□□□ -0.06
PTCD3-210ENST00000473829 MS4A10Q96PG2 267 aa14.7□□□□□ -0.06
PTCD3-210ENST00000473829 MTFP1Q9UDX5 166 aa14.7□□□□□ -0.06
PTCD3-210ENST00000473829 VSIG4Q9Y279 399 aa14.7□□□□□ -0.06
PTCD3-210ENST00000473829 KBTBD11O94819 623 aa14.69□□□□□ -0.06
PTCD3-210ENST00000473829 PRB2P02812 416 aaPredicted RBP14.69□□□□□ -0.06
PTCD3-210ENST00000473829 RLN1P04808 185 aa14.69□□□□□ -0.06
PTCD3-210ENST00000473829 CATR1Q13166 79 aa14.69□□□□□ -0.06
PTCD3-210ENST00000473829 FHL3Q13643 280 aa14.69□□□□□ -0.06
PTCD3-210ENST00000473829 VAX1Q5SQQ9 334 aa14.69□□□□□ -0.06
PTCD3-210ENST00000473829 SSX9Q7RTT3 188 aa14.69□□□□□ -0.06
PTCD3-210ENST00000473829 OR5T1Q8NG75 326 aa14.69□□□□□ -0.06
PTCD3-210ENST00000473829 SRSF12Q8WXF0 261 aaKnown RBP14.69□□□□□ -0.06
PTCD3-210ENST00000473829 RHOVQ96L33 236 aa14.69□□□□□ -0.06
PTCD3-210ENST00000473829 TINAGL1Q9GZM7 467 aaPredicted RBP14.69□□□□□ -0.06
PTCD3-210ENST00000473829 C6orf62Q9GZU0 229 aaPredicted RBP14.69□□□□□ -0.06
PTCD3-210ENST00000473829 ALX4Q9H161 411 aaPredicted RBP14.69□□□□□ -0.06
PTCD3-210ENST00000473829 MSGN1A6NI15 193 aa14.68□□□□□ -0.06
PTCD3-210ENST00000473829 RBFOX2O43251 390 aaKnown RBP eCLIP14.68□□□□□ -0.06
PTCD3-210ENST00000473829 PGLYRP1O75594 196 aaPredicted RBP14.68□□□□□ -0.06
PTCD3-210ENST00000473829 OR2A4O95047 310 aa14.68□□□□□ -0.06
PTCD3-210ENST00000473829 CD3DP04234 171 aa14.68□□□□□ -0.06
PTCD3-210ENST00000473829 TSPAN5P62079 268 aa14.68□□□□□ -0.06
PTCD3-210ENST00000473829 RUNX1Q01196 453 aa14.68□□□□□ -0.06
PTCD3-210ENST00000473829 PYHIN1Q6K0P9 492 aa14.68□□□□□ -0.06
PTCD3-210ENST00000473829 TMEM167AQ8TBQ9 72 aa14.68□□□□□ -0.06
PTCD3-210ENST00000473829 RCC1LQ96I51 464 aaKnown RBP14.68□□□□□ -0.06
PTCD3-210ENST00000473829 OR2A7Q96R45 310 aa14.68□□□□□ -0.06
PTCD3-210ENST00000473829 NXF2Q9GZY0 626 aaKnown RBP14.68□□□□□ -0.06
PTCD3-210ENST00000473829 GABARAPH6UMI1 98 aa14.67□□□□□ -0.06
PTCD3-210ENST00000473829 S1PR2O95136 353 aa14.67□□□□□ -0.06
PTCD3-210ENST00000473829 RAB25P57735 213 aa14.67□□□□□ -0.06
PTCD3-210ENST00000473829 TPPP2P59282 170 aa14.67□□□□□ -0.06
PTCD3-210ENST00000473829 DEFA5Q01523 94 aa14.67□□□□□ -0.06
PTCD3-210ENST00000473829 FOXB2Q5VYV0 432 aa14.67□□□□□ -0.06
PTCD3-210ENST00000473829 MMD2Q8IY49 270 aa14.67□□□□□ -0.06
PTCD3-210ENST00000473829 POC5Q8NA72 575 aa14.67□□□□□ -0.06
PTCD3-210ENST00000473829 OR11H1Q8NG94 326 aa14.67□□□□□ -0.06
PTCD3-210ENST00000473829 OR4D10Q8NGI6 311 aa14.67□□□□□ -0.06
PTCD3-210ENST00000473829 FCAMRQ8WWV6 532 aa14.67□□□□□ -0.06
PTCD3-210ENST00000473829 BORCS5Q969J3 196 aa14.67□□□□□ -0.06
PTCD3-210ENST00000473829 DIRAS2Q96HU8 199 aa14.67□□□□□ -0.06
PTCD3-210ENST00000473829 A0A1B0GW64 132 aa14.66□□□□□ -0.06
PTCD3-210ENST00000473829 CCDC160A6NGH7 325 aa14.66□□□□□ -0.06
PTCD3-210ENST00000473829 GPR31O00270 319 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms