RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 SPRY2O43597 315 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 GGCTO75223 188 aaKnown RBP9.35□□□□□ -0.91
TRAF4-209ENST00000473421 BPNT1O95861 308 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 IL6RP08887 468 aaPredicted RBP9.35□□□□□ -0.91
TRAF4-209ENST00000473421 MYOD1P15172 320 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 DUTP33316 252 aaKnown RBP9.35□□□□□ -0.91
TRAF4-209ENST00000473421 WNT4P56705 351 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 TAS2R43P59537 309 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 ZNF57Q68EA5 555 aaPredicted RBP9.35□□□□□ -0.91
TRAF4-209ENST00000473421 SLC16A13Q7RTY0 426 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 GPHB5Q86YW7 130 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 PQLC1Q8N2U9 271 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 ZNF555Q8NEP9 628 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 CYGBQ8WWM9 190 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 PSORS1C1Q9UIG5 152 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 FBXL7Q9UJT9 491 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 HSF4Q9ULV5 492 aa9.35□□□□□ -0.91
TRAF4-209ENST00000473421 TRBV6-7A0A0A0MS04 114 aa9.34□□□□□ -0.91
TRAF4-209ENST00000473421 IGHV3-35A0A0C4DH35 117 aa9.34□□□□□ -0.91
TRAF4-209ENST00000473421 TUSC2O75896 110 aa9.34□□□□□ -0.91
TRAF4-209ENST00000473421 AREGP15514 252 aa9.34□□□□□ -0.91
TRAF4-209ENST00000473421 MAPK3P27361 379 aaPredicted RBP9.34□□□□□ -0.91
TRAF4-209ENST00000473421 RPL30P62888 115 aaKnown RBP9.34□□□□□ -0.91
TRAF4-209ENST00000473421 VMA21Q3ZAQ7 101 aa9.34□□□□□ -0.91
TRAF4-209ENST00000473421 AHSA2Q719I0 299 aa9.34□□□□□ -0.91
TRAF4-209ENST00000473421 GATAD1Q8WUU5 269 aa9.34□□□□□ -0.91
TRAF4-209ENST00000473421 PHLDA1Q8WV24 401 aaPredicted RBP9.34□□□□□ -0.91
TRAF4-209ENST00000473421 PHYHIPQ92561 330 aa9.34□□□□□ -0.91
TRAF4-209ENST00000473421 CABLES2Q9BTV7 478 aa9.34□□□□□ -0.91
TRAF4-209ENST00000473421 FAT2Q9NYQ8 4349 aa9.34□□□□□ -0.91
TRAF4-209ENST00000473421 ABCA13Q86UQ4 5058 aa9.34□□□□□ -0.91
TRAF4-209ENST00000473421 DNAH2Q9P225 4427 aa9.34□□□□□ -0.91
TRAF4-209ENST00000473421 ARL3P36405 182 aa9.33□□□□□ -0.92
TRAF4-209ENST00000473421 BRWD1-AS2P59051 145 aa9.33□□□□□ -0.92
TRAF4-209ENST00000473421 RTL8BQ17RB0 113 aa9.33□□□□□ -0.92
TRAF4-209ENST00000473421 OR2B11Q5JQS5 317 aa9.33□□□□□ -0.92
TRAF4-209ENST00000473421 LGALS9CQ6DKI2 356 aa9.33□□□□□ -0.92
TRAF4-209ENST00000473421 TMEM91Q6ZNR0 172 aa9.33□□□□□ -0.92
TRAF4-209ENST00000473421 OR6M1Q8NGM8 313 aa9.33□□□□□ -0.92
TRAF4-209ENST00000473421 OR4A4PQ8NGN8 299 aa9.33□□□□□ -0.92
TRAF4-209ENST00000473421 THRSPQ92748 146 aa9.33□□□□□ -0.92
TRAF4-209ENST00000473421 TMEM203Q969S6 136 aa9.33□□□□□ -0.92
TRAF4-209ENST00000473421 ELF5Q9UKW6 265 aaPredicted RBP9.33□□□□□ -0.92
TRAF4-209ENST00000473421 AK6Q9Y3D8 172 aaKnown RBP9.33□□□□□ -0.92
TRAF4-209ENST00000473421 DYNC1H1Q14204 4646 aaKnown RBP9.32□□□□□ -0.92
TRAF4-209ENST00000473421 MFSD2BA6NFX1 497 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 CGB1A6NKQ9 187 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 A8MWP6 167 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 REG1AP05451 166 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 FCGR3AP08637 254 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 UCHL1P09936 223 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 FCGR2BP31994 310 aaPredicted RBP9.32□□□□□ -0.92
TRAF4-209ENST00000473421 BMI1P35226 326 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 CDK10Q15131 360 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 ZNF585BQ52M93 769 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 Q6ZWC4 215 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 OR10J5Q8NHC4 309 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 RNF183Q96D59 192 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 GPHA2Q96T91 129 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 SPIN2AQ99865 258 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 SPIN2BQ9BPZ2 258 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 FKBP14Q9NWM8 211 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 MGAT4AQ9UM21 535 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 LSM2Q9Y333 95 aaKnown RBP9.32□□□□□ -0.92
TRAF4-209ENST00000473421 DNAH6Q9C0G6 4158 aa9.32□□□□□ -0.92
TRAF4-209ENST00000473421 PKHD1P08F94 4074 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 SLC17A2O00624 439 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 MYL12BO14950 172 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 FCGR3BO75015 233 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 IGLV2-14P01704 120 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 C8orf88P0DMB2 117 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 CTRB1P17538 263 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 RPL35AP18077 110 aaKnown RBP9.31□□□□□ -0.92
TRAF4-209ENST00000473421 MED21Q13503 144 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 ZNF124Q15973 351 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 C2orf76Q3KRA6 126 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 ODF3L2Q3SX64 289 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 HSD17B12Q53GQ0 312 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 CTRB2Q6GPI1 263 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 H1FOOQ8IZA3 346 aaPredicted RBP9.31□□□□□ -0.92
TRAF4-209ENST00000473421 BPIFB6Q8NFQ5 453 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 FYTTD1Q96QD9 318 aaKnown RBP9.31□□□□□ -0.92
TRAF4-209ENST00000473421 URM1Q9BTM9 101 aaKnown RBP9.31□□□□□ -0.92
TRAF4-209ENST00000473421 TP53TG1Q9Y2A0 90 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 ZNF257Q9Y2Q1 563 aa9.31□□□□□ -0.92
TRAF4-209ENST00000473421 KLK5Q9Y337 293 aaPredicted RBP9.31□□□□□ -0.92
TRAF4-209ENST00000473421 TMEM272A0A1B0GTI8 110 aa9.3□□□□□ -0.92
TRAF4-209ENST00000473421 ANKRD65E5RJM6 399 aa9.3□□□□□ -0.92
TRAF4-209ENST00000473421 RAB27BO00194 218 aa9.3□□□□□ -0.92
TRAF4-209ENST00000473421 CLEC3BP05452 202 aa9.3□□□□□ -0.92
TRAF4-209ENST00000473421 RRASP10301 218 aa9.3□□□□□ -0.92
TRAF4-209ENST00000473421 GNB3P16520 340 aa9.3□□□□□ -0.92
TRAF4-209ENST00000473421 SERPINB10P48595 397 aa9.3□□□□□ -0.92
TRAF4-209ENST00000473421 NANOS2P60321 138 aaKnown RBP9.3□□□□□ -0.92
TRAF4-209ENST00000473421 MMD2Q8IY49 270 aa9.3□□□□□ -0.92
TRAF4-209ENST00000473421 OR1L6Q8NGR2 347 aa9.3□□□□□ -0.92
TRAF4-209ENST00000473421 OSR1Q8TAX0 266 aaPredicted RBP9.3□□□□□ -0.92
TRAF4-209ENST00000473421 FBLIM1Q8WUP2 373 aa9.3□□□□□ -0.92
TRAF4-209ENST00000473421 PLGRKTQ9HBL7 147 aa9.3□□□□□ -0.92
TRAF4-209ENST00000473421 A0A075B6Q4 140 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms