RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 TUBA4BQ9H853 241 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 TECRQ9NZ01 308 aaKnown RBP10.29□□□□□ -0.76
CHD3-209ENST00000473376 ZNF230Q9UIE0 474 aaPredicted RBP10.29□□□□□ -0.76
CHD3-209ENST00000473376 ZNF257Q9Y2Q1 563 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 MRPS7Q9Y2R9 242 aaKnown RBP10.29□□□□□ -0.76
CHD3-209ENST00000473376 OR2W1Q9Y3N9 320 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 HUWE1Q7Z6Z7 4374 aaKnown RBP10.29□□□□□ -0.76
CHD3-209ENST00000473376 TENM2Q9NT68 2774 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 DNAH7Q8WXX0 4024 aa10.29□□□□□ -0.76
CHD3-209ENST00000473376 LINC00473A8K010 186 aa10.28□□□□□ -0.76
CHD3-209ENST00000473376 LGALS9O00182 355 aa10.28□□□□□ -0.76
CHD3-209ENST00000473376 CRYZL1O95825 349 aa10.28□□□□□ -0.76
CHD3-209ENST00000473376 CD36P16671 472 aa10.28□□□□□ -0.76
CHD3-209ENST00000473376 FGF9P31371 208 aaPredicted RBP10.28□□□□□ -0.76
CHD3-209ENST00000473376 MSMO1Q15800 293 aa10.28□□□□□ -0.76
CHD3-209ENST00000473376 TNXAQ16473 311 aa10.28□□□□□ -0.76
CHD3-209ENST00000473376 NRG4Q8WWG1 115 aa10.28□□□□□ -0.76
CHD3-209ENST00000473376 HSD17B10Q99714 261 aaKnown RBP10.28□□□□□ -0.76
CHD3-209ENST00000473376 AIFM2Q9BRQ8 373 aa10.28□□□□□ -0.76
CHD3-209ENST00000473376 AKIP1Q9NQ31 210 aa10.28□□□□□ -0.76
CHD3-209ENST00000473376 NKX1-2Q9UD57 310 aaPredicted RBP10.28□□□□□ -0.76
CHD3-209ENST00000473376 MPPED1O15442 326 aa10.27□□□□□ -0.77
CHD3-209ENST00000473376 FGF2P09038 288 aa10.27□□□□□ -0.77
CHD3-209ENST00000473376 RHOGP84095 191 aa10.27□□□□□ -0.77
CHD3-209ENST00000473376 PLA2G7Q13093 441 aa10.27□□□□□ -0.77
CHD3-209ENST00000473376 HACD4Q5VWC8 232 aa10.27□□□□□ -0.77
CHD3-209ENST00000473376 CNIH2Q6PI25 160 aa10.27□□□□□ -0.77
CHD3-209ENST00000473376 HAPLN4Q86UW8 402 aa10.27□□□□□ -0.77
CHD3-209ENST00000473376 TPRA1Q86W33 373 aa10.27□□□□□ -0.77
CHD3-209ENST00000473376 GPHB5Q86YW7 130 aa10.27□□□□□ -0.77
CHD3-209ENST00000473376 OR51E2Q9H255 320 aa10.27□□□□□ -0.77
CHD3-209ENST00000473376 ZNF430Q9H8G1 570 aaPredicted RBP10.27□□□□□ -0.77
CHD3-209ENST00000473376 ZC4H2Q9NQZ6 224 aa10.27□□□□□ -0.77
CHD3-209ENST00000473376 SLC2A8Q9NY64 477 aa10.27□□□□□ -0.77
CHD3-209ENST00000473376 RBMX2Q9Y388 322 aaKnown RBP10.27□□□□□ -0.77
CHD3-209ENST00000473376 NPIPB5A8MRT5 1133 aa10.26□□□□□ -0.77
CHD3-209ENST00000473376 NOTOA8MTQ0 251 aa10.26□□□□□ -0.77
CHD3-209ENST00000473376 BMPR1BO00238 502 aa10.26□□□□□ -0.77
CHD3-209ENST00000473376 DHFRP00374 187 aa10.26□□□□□ -0.77
CHD3-209ENST00000473376 TRBV12-3P01733 135 aa10.26□□□□□ -0.77
CHD3-209ENST00000473376 SAA1P0DJI8 122 aaPredicted RBP10.26□□□□□ -0.77
CHD3-209ENST00000473376 KIR2DS2P43631 304 aa10.26□□□□□ -0.77
CHD3-209ENST00000473376 SCAND1P57086 179 aa10.26□□□□□ -0.77
CHD3-209ENST00000473376 OR10A3P58181 314 aa10.26□□□□□ -0.77
CHD3-209ENST00000473376 ZNF66Q6ZN08 573 aa10.26□□□□□ -0.77
CHD3-209ENST00000473376 OR4S2Q8NH73 311 aa10.26□□□□□ -0.77
CHD3-209ENST00000473376 TMEM127O75204 238 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 GGCTO75223 188 aaKnown RBP10.25□□□□□ -0.77
CHD3-209ENST00000473376 RBMXL2O75526 392 aaKnown RBP10.25□□□□□ -0.77
CHD3-209ENST00000473376 TPPPO94811 219 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 IGLV2-14P01704 120 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 CRYGCP07315 174 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 GABARAPL2P60520 117 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 ZNF45Q02386 682 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 EIF4EBP1Q13541 118 aaPredicted RBP10.25□□□□□ -0.77
CHD3-209ENST00000473376 EXOSC2Q13868 293 aaKnown RBP10.25□□□□□ -0.77
CHD3-209ENST00000473376 C15orf32Q32M92 178 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 CDNFQ49AH0 187 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 KCTD9Q7L273 389 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 TMEM167AQ8TBQ9 72 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 ACOT12Q8WYK0 555 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 OR2A7Q96R45 310 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 ATG5Q9H1Y0 275 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 HIPK2Q9H2X6 1198 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 SLC2A9Q9NRM0 540 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 DMRT1Q9Y5R6 373 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 CEPT1Q9Y6K0 416 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 TNCP24821 2201 aa10.25□□□□□ -0.77
CHD3-209ENST00000473376 IGKV1D-8A0A087WSZ0 117 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 ZNF785A8K8V0 405 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 FCGR3BO75015 233 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 KBTBD11O94819 623 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 HRASP01112 189 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 ZNF735P0CB33 412 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 HIST1H1BP16401 226 aaKnown RBP10.24□□□□□ -0.77
CHD3-209ENST00000473376 DEFB114Q30KQ6 69 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 CD300EQ496F6 205 aaPredicted RBP10.24□□□□□ -0.77
CHD3-209ENST00000473376 IDO2Q6ZQW0 420 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 PUSL1Q8N0Z8 303 aaKnown RBP10.24□□□□□ -0.77
CHD3-209ENST00000473376 ZBTB34Q8NCN2 500 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 OR4A5Q8NH83 315 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 MAFIPQ8WZ33 124 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 FCGR1BQ92637 280 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 NEURL2Q9BR09 285 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 DCUN1D5Q9BTE7 237 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 ANXA10Q9UJ72 324 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 RAB26Q9ULW5 256 aa10.24□□□□□ -0.77
CHD3-209ENST00000473376 A0A075B6Q4 140 aa10.23□□□□□ -0.77
CHD3-209ENST00000473376 A0A0A6YYH2 397 aa10.23□□□□□ -0.77
CHD3-209ENST00000473376 A6NJ64 397 aa10.23□□□□□ -0.77
CHD3-209ENST00000473376 TEX22C9J3V5 150 aa10.23□□□□□ -0.77
CHD3-209ENST00000473376 RBFOX2O43251 390 aaKnown RBP eCLIP10.23□□□□□ -0.77
CHD3-209ENST00000473376 UBE2UQ5VVX9 321 aa10.23□□□□□ -0.77
CHD3-209ENST00000473376 ADAMTSL5Q6ZMM2 481 aa10.23□□□□□ -0.77
CHD3-209ENST00000473376 NR2C2APQ86WQ0 139 aa10.23□□□□□ -0.77
CHD3-209ENST00000473376 FYTTD1Q96QD9 318 aaKnown RBP10.23□□□□□ -0.77
CHD3-209ENST00000473376 SRSF8Q9BRL6 282 aaKnown RBP10.23□□□□□ -0.77
CHD3-209ENST00000473376 ST6GALNAC5Q9BVH7 336 aa10.23□□□□□ -0.77
CHD3-209ENST00000473376 TRBV7-1A0A0A6YYK4 115 aa10.22□□□□□ -0.77
CHD3-209ENST00000473376 IZUMO1RA6ND01 250 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms