RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 QRFPP83859 136 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 SRSF3P84103 164 aaKnown RBP6.88□□□□□ -1.31
CPSF4-211ENST00000471455 DEFA5Q01523 94 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 RAB11BQ15907 218 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 PRSS8Q16651 343 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 CEACAM19Q7Z692 300 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 C8orf59Q8N0T1 100 aaPredicted RBP6.88□□□□□ -1.31
CPSF4-211ENST00000471455 DHRSXQ8N5I4 330 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 DEFB125Q8N687 156 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 PACRGLQ8N7B6 248 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 NANOGP1Q8N7R0 232 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 OSR1Q8TAX0 266 aaPredicted RBP6.88□□□□□ -1.31
CPSF4-211ENST00000471455 DDB2Q92466 427 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 CYYR1Q96J86 154 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 GINS4Q9BRT9 223 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 GGTLC1Q9BX51 225 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 AKIP1Q9NQ31 210 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 ZC4H2Q9NQZ6 224 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 SDHAF2Q9NX18 166 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 ZNF230Q9UIE0 474 aaPredicted RBP6.88□□□□□ -1.31
CPSF4-211ENST00000471455 PSORS1C1Q9UIG5 152 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 PLECQ15149 4684 aaKnown RBP6.88□□□□□ -1.31
CPSF4-211ENST00000471455 A0A0A6YYD4 124 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 DPPA5A6NC42 116 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 RBMY1BA6NDE4 496 aaKnown RBP6.87□□□□□ -1.31
CPSF4-211ENST00000471455 RBMY1EA6NEQ0 496 aaKnown RBP6.87□□□□□ -1.31
CPSF4-211ENST00000471455 C2orf70A6NJV1 201 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 LGALS9O00182 355 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 SLC17A2O00624 439 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 BET1O15155 118 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 ARL6IP5O75915 188 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 LY6G6CO95867 125 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 DHFRP00374 187 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 CD7P09564 240 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 RBMY1DP0C7P1 496 aaKnown RBP6.87□□□□□ -1.31
CPSF4-211ENST00000471455 GSTT2P0CG29 244 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 GSTT2BP0CG30 244 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 APELAP0DMC3 54 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 FOLR2P14207 255 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 KIR2DS2P43631 304 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 P2RY14Q15391 338 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 SSX1Q16384 188 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 DEFB114Q30KQ6 69 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 C15orf32Q32M92 178 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 KRTAP19-4Q3LI73 84 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 OR4A47Q6IF82 309 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 MMD2Q8IY49 270 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 FAM89BQ8N5H3 189 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 ARHGAP5-AS1Q96IT6 56 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 CABLES2Q9BTV7 478 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 ST6GALNAC5Q9BVH7 336 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 PECRQ9BY49 303 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 KCNK15Q9H427 330 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 PLCXD1Q9NUJ7 323 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 ZNF257Q9Y2Q1 563 aa6.87□□□□□ -1.31
CPSF4-211ENST00000471455 MRPS7Q9Y2R9 242 aaKnown RBP6.87□□□□□ -1.31
CPSF4-211ENST00000471455 LOC102724200A0A096LPH7 203 aaPredicted RBP6.86□□□□□ -1.31
CPSF4-211ENST00000471455 TRBV9A0A0B4J1U6 114 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 IGKV1-6A0A0C4DH72 117 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 ZNF785A8K8V0 405 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 CRYZL1O95825 349 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 CDK1P06493 297 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 UCHL1P09936 223 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 CD37P11049 281 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 GADD45AP24522 165 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 PSMA1P25786 263 aaKnown RBP6.86□□□□□ -1.31
CPSF4-211ENST00000471455 PSMD7P51665 324 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 LINC00205P59089 165 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 CDK10Q15131 360 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 TRAM1Q15629 374 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 FAM106AQ4KMX7 169 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 LCE1DQ5T752 114 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 ZNF57Q68EA5 555 aaPredicted RBP6.86□□□□□ -1.31
CPSF4-211ENST00000471455 TTC9CQ8N5M4 171 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 TMEM217Q8N7C4 229 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 BPIFB6Q8NFQ5 453 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 OR52B4Q8NGK2 314 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 VSTM2AQ8TAG5 236 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 UFD1Q92890 307 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 KLK5Q9Y337 293 aaPredicted RBP6.86□□□□□ -1.31
CPSF4-211ENST00000471455 PRELID3BQ9Y3B1 194 aa6.86□□□□□ -1.31
CPSF4-211ENST00000471455 TRBV6-7A0A0A0MS04 114 aa6.85□□□□□ -1.31
CPSF4-211ENST00000471455 SRRM4A7MD48 611 aaKnown RBP6.85□□□□□ -1.31
CPSF4-211ENST00000471455 FOXI3A8MTJ6 420 aaPredicted RBP6.85□□□□□ -1.31
CPSF4-211ENST00000471455 KRTAP9-7A8MTY7 169 aa6.85□□□□□ -1.31
CPSF4-211ENST00000471455 DENRO43583 198 aaKnown RBP6.85□□□□□ -1.31
CPSF4-211ENST00000471455 FCGR3AP08637 254 aa6.85□□□□□ -1.31
CPSF4-211ENST00000471455 CD36P16671 472 aa6.85□□□□□ -1.31
CPSF4-211ENST00000471455 TALDO1P37837 337 aa6.85□□□□□ -1.31
CPSF4-211ENST00000471455 APOC4P55056 127 aa6.85□□□□□ -1.31
CPSF4-211ENST00000471455 ZNF45Q02386 682 aa6.85□□□□□ -1.31
CPSF4-211ENST00000471455 PMS2P11Q13670 270 aa6.85□□□□□ -1.31
CPSF4-211ENST00000471455 INSL4Q14641 139 aa6.85□□□□□ -1.31
CPSF4-211ENST00000471455 SPHARQ15513 63 aa6.85□□□□□ -1.31
CPSF4-211ENST00000471455 GPHB5Q86YW7 130 aa6.85□□□□□ -1.31
CPSF4-211ENST00000471455 MARC2Q969Z3 335 aa6.85□□□□□ -1.31
CPSF4-211ENST00000471455 EEF1AKMT3Q96AZ1 226 aa6.85□□□□□ -1.31
CPSF4-211ENST00000471455 RAB3CQ96E17 227 aa6.85□□□□□ -1.31
CPSF4-211ENST00000471455 DCUN1D5Q9BTE7 237 aa6.85□□□□□ -1.31
CPSF4-211ENST00000471455 WFDC10AQ9H1F0 79 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms