RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 OR11H1Q8NG94 326 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 OR10A6Q8NH74 314 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 NELFBQ8WX92 580 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 ZNF514Q96K75 400 aaPredicted RBP0.1□□□□□ -2.39
UBXN4-207ENST00000471246 TBX5Q99593 518 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 MGLLQ99685 303 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 PRSS27Q9BQR3 290 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 UPK3BQ9BT76 320 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 CHID1Q9BWS9 393 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 BLZF1Q9H2G9 400 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 FBXL15Q9H469 300 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 DIABLOQ9NR28 239 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 MED29Q9NX70 200 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 RRP15Q9Y3B9 282 aaKnown RBP0.1□□□□□ -2.39
UBXN4-207ENST00000471246 V9GYY9 64 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 AFDNP55196 1824 aaKnown RBP0.1□□□□□ -2.39
UBXN4-207ENST00000471246 USF3Q68DE3 2245 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 ARHGEF5Q12774 1597 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 TIAM1Q13009 1591 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 MROH2BQ7Z745 1585 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 CLUHO75153 1309 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 ATP7BP35670 1465 aa0.1□□□□□ -2.39
UBXN4-207ENST00000471246 RGPD8O14715 1765 aaPredicted RBP0.09□□□□□ -2.39
UBXN4-207ENST00000471246 COL14A1Q05707 1796 aaKnown RBP0.09□□□□□ -2.39
UBXN4-207ENST00000471246 RGPD5Q99666 1765 aa0.09□□□□□ -2.39
UBXN4-207ENST00000471246 NFAT5O94916 1531 aa0.09□□□□□ -2.39
UBXN4-207ENST00000471246 NISCHQ9Y2I1 1504 aa0.09□□□□□ -2.39
UBXN4-207ENST00000471246 NHSQ6T4R5 1651 aa0.09□□□□□ -2.39
UBXN4-207ENST00000471246 TMSB15BA0A087X1C1 80 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 IGKV2D-26A0A0A0MRZ7 120 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 IGKV1-9A0A0C4DH69 117 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 NCF1BA6NI72 391 aaPredicted RBP0.09□□□□□ -2.4
UBXN4-207ENST00000471246 NCF1CA8MVU1 366 aaPredicted RBP0.09□□□□□ -2.4
UBXN4-207ENST00000471246 I3L4J1 428 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 ZW10O43264 779 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 HCRTO43612 131 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 ENSAO43768 121 aaKnown RBP0.09□□□□□ -2.4
UBXN4-207ENST00000471246 GMDSO60547 372 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 SMR3BP02814 79 aaPredicted RBP0.09□□□□□ -2.4
UBXN4-207ENST00000471246 COX6B1P14854 86 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 SLC25A16P16260 332 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 ATF1P18846 271 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 TSPOP30536 169 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 HSPA13P48723 471 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 RPL14P50914 215 aaKnown RBP0.09□□□□□ -2.4
UBXN4-207ENST00000471246 BCAP31P51572 246 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 TSPEAR-AS2P59090 65 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 ERHP84090 104 aaKnown RBP0.09□□□□□ -2.4
UBXN4-207ENST00000471246 PRDX1Q06830 199 aaKnown RBP0.09□□□□□ -2.4
UBXN4-207ENST00000471246 BAXQ07812 192 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 STX4Q12846 297 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 MRPL51Q4U2R6 128 aaKnown RBP0.09□□□□□ -2.4
UBXN4-207ENST00000471246 FAM19A1Q7Z5A9 133 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 LINC00523Q86TU6 105 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 ARHGAP18Q8N392 663 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 SPICQ8N5J4 248 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 BBOF1Q8ND07 529 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 OR8G5Q8NG78 346 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 OR8B12Q8NGG6 310 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 OR9I1Q8NGQ6 314 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 ZNF707Q96C28 371 aaPredicted RBP0.09□□□□□ -2.4
UBXN4-207ENST00000471246 SLC35G5Q96KT7 338 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 PITX2Q99697 317 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 EBNA1BP2Q99848 306 aaKnown RBP0.09□□□□□ -2.4
UBXN4-207ENST00000471246 UTP23Q9BRU9 249 aaKnown RBP0.09□□□□□ -2.4
UBXN4-207ENST00000471246 EBPLQ9BY08 206 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 CHRAC1Q9NRG0 131 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 SDHAF2Q9NX18 166 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 VAPAQ9P0L0 249 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 IFNKQ9P0W0 207 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 NUP160Q12769 1436 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 KIF27Q86VH2 1401 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 NSD3Q9BZ95 1437 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 POLR1AO95602 1720 aaPredicted RBP0.09□□□□□ -2.4
UBXN4-207ENST00000471246 SUPT6HQ7KZ85 1726 aaKnown RBP0.09□□□□□ -2.4
UBXN4-207ENST00000471246 FMN2Q9NZ56 1722 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 UNC13AQ9UPW8 1703 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 UBR3Q6ZT12 1888 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 POLA1P09884 1462 aaPredicted RBP0.09□□□□□ -2.4
UBXN4-207ENST00000471246 DEPDC5O75140 1603 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 MYLKQ15746 1914 aa0.09□□□□□ -2.4
UBXN4-207ENST00000471246 EML5Q05BV3 1969 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 IQGAP1P46940 1657 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 ATP7AQ04656 1500 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 PLXNA1Q9UIW2 1896 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 DIP2CQ9Y2E4 1556 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 PTPRGP23470 1445 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 PRG4Q92954 1404 aaPredicted RBP0.08□□□□□ -2.4
UBXN4-207ENST00000471246 TRAV8-2A0A0B4J237 113 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 TRAV41A0A0B4J266 112 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 A0A1B0GTQ1 180 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 TMEM235A6NFC5 223 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 FAM183AA6NL82 134 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 RFPL4AA6NLU0 287 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 C2orf74A8MZ97 194 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 C9J4A7 227 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 RFPL4AL1F8VTS6 287 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 H3BSA7 217 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 PLA2G10O15496 165 aa0.08□□□□□ -2.4
UBXN4-207ENST00000471246 ZNF737O75373 536 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms