RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 IGKV1-39P01597 117 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 IGKV1-16P04430 117 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 IGKV1D-39P04432 117 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 IGHV4-38-2P0DP08 117 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 PSMB6P28072 239 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 NUP62P37198 522 aaPredicted RBP7.88□□□□□ -1.15
CCM2-204ENST00000470837 NKX2-1P43699 371 aaPredicted RBP7.88□□□□□ -1.15
CCM2-204ENST00000470837 H2BFSP57053 126 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 SCGB2A2Q13296 93 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 C2orf68Q2NKX9 166 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 NMSQ5H8A3 153 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 RUSC1-AS1Q66K80 236 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 CIARTQ8N365 385 aaPredicted RBP7.88□□□□□ -1.15
CCM2-204ENST00000470837 ZBTB8BQ8NAP8 495 aaPredicted RBP7.88□□□□□ -1.15
CCM2-204ENST00000470837 OR4A5Q8NH83 315 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 THAP6Q8TBB0 222 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 GPR146Q96CH1 333 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 OR10C1Q96KK4 312 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 FYTTD1Q96QD9 318 aaKnown RBP7.88□□□□□ -1.15
CCM2-204ENST00000470837 YAE1D1Q9NRH1 226 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 TMEM140Q9NV12 185 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 FKBP11Q9NYL4 201 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 C1RLQ9NZP8 487 aa7.88□□□□□ -1.15
CCM2-204ENST00000470837 DOCK11Q5JSL3 2073 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 DSCAML1Q8TD84 2053 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 A0A0U1RQK1 487 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 L7N2F9 121 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 ST8SIA3O43173 380 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 CD5LO43866 347 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 VENTXO95231 258 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 SPDEFO95238 335 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 IFNA17P01571 189 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 IGKV1D-33P01593 117 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 IGKV1-33P01594 117 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 IGKV1-5P01602 117 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 SNRNP70P08621 437 aaKnown RBP7.87□□□□□ -1.15
CCM2-204ENST00000470837 TMEM11P17152 192 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 BRWD1-AS2P59051 145 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 UBE2KP61086 200 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 VAMP2P63027 116 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 HNF4GQ14541 408 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 MMDQ15546 238 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 SPNS3Q6ZMD2 512 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 FOXRED2Q8IWF2 684 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 VKORC1L1Q8N0U8 176 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 PIP4P2Q8N4L2 257 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 PPP1R1CQ8WVI7 109 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 ZDHHC16Q969W1 377 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 ST6GAL2Q96JF0 529 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 ENY2Q9NPA8 101 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 COA4Q9NYJ1 87 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 PRNDQ9UKY0 176 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 LSM5Q9Y4Y9 91 aaKnown RBP7.87□□□□□ -1.15
CCM2-204ENST00000470837 CCDC168Q8NDH2 2452 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 CREBBPQ92793 2442 aa7.87□□□□□ -1.15
CCM2-204ENST00000470837 FXYD6-FXYD2A0A087WZ82 144 aa7.86□□□□□ -1.15
CCM2-204ENST00000470837 NCBP2LA6PVI3 153 aaKnown RBP7.86□□□□□ -1.15
CCM2-204ENST00000470837 MPTX1A8MV57 137 aa7.86□□□□□ -1.15
CCM2-204ENST00000470837 FAM90A26D6RGX4 464 aa7.86□□□□□ -1.15
CCM2-204ENST00000470837 SRSF4Q08170 494 aaKnown RBP7.86□□□□□ -1.15
CCM2-204ENST00000470837 HABP2Q14520 560 aaPredicted RBP7.86□□□□□ -1.15
CCM2-204ENST00000470837 POU2AF1Q16633 256 aa7.86□□□□□ -1.15
CCM2-204ENST00000470837 OR4A47Q6IF82 309 aa7.86□□□□□ -1.15
CCM2-204ENST00000470837 THNSL2Q86YJ6 484 aa7.86□□□□□ -1.15
CCM2-204ENST00000470837 MRPL41Q8IXM3 137 aaKnown RBP7.86□□□□□ -1.15
CCM2-204ENST00000470837 TEX45Q8NA69 505 aa7.86□□□□□ -1.15
CCM2-204ENST00000470837 OR8H1Q8NGG4 311 aa7.86□□□□□ -1.15
CCM2-204ENST00000470837 C17orf50Q8WW18 174 aa7.86□□□□□ -1.15
CCM2-204ENST00000470837 HYLS1Q96M11 299 aa7.86□□□□□ -1.15
CCM2-204ENST00000470837 COMMD5Q9GZQ3 224 aa7.86□□□□□ -1.15
CCM2-204ENST00000470837 ZC4H2Q9NQZ6 224 aa7.86□□□□□ -1.15
CCM2-204ENST00000470837 BET1LQ9NYM9 111 aa7.86□□□□□ -1.15
CCM2-204ENST00000470837 METTL1Q9UBP6 276 aaKnown RBP7.86□□□□□ -1.15
CCM2-204ENST00000470837 PITPNC1Q9UKF7 332 aa7.86□□□□□ -1.15
CCM2-204ENST00000470837 NOTCH2Q04721 2471 aa7.86□□□□□ -1.15
CCM2-204ENST00000470837 CEBPZOSA8MTT3 80 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 NBR2O15453 112 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 SLC25A17O43808 307 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 GPR137BO60478 399 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 KBTBD11O94819 623 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 NXPH3O95157 252 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 LY86O95711 162 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 AVPP01185 164 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 C1QBP02746 253 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 FGF2P09038 288 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 SAA1P0DJI8 122 aaPredicted RBP7.85□□□□□ -1.15
CCM2-204ENST00000470837 C4BPBP20851 252 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 EIF2B2P49770 351 aaKnown RBP7.85□□□□□ -1.15
CCM2-204ENST00000470837 DYNLT3P51808 116 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 RPL8P62917 257 aaKnown RBP7.85□□□□□ -1.15
CCM2-204ENST00000470837 RPP30P78346 268 aaKnown RBP7.85□□□□□ -1.15
CCM2-204ENST00000470837 RAB32Q13637 225 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 AANATQ16613 207 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 IZUMO4Q1ZYL8 232 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 LRRC75BQ2VPJ9 315 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 KLF17Q5JT82 389 aaPredicted RBP7.85□□□□□ -1.15
CCM2-204ENST00000470837 LDLRAD2Q5SZI1 272 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 C11orf87Q6NUJ2 197 aa7.85□□□□□ -1.15
CCM2-204ENST00000470837 RBMS3Q6XE24 437 aaKnown RBP7.85□□□□□ -1.15
CCM2-204ENST00000470837 MMD2Q8IY49 270 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms