RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 AIREO43918 545 aa13.3□□□□□ -0.28
COL7A1-208ENST00000470076 SLC22A5O76082 557 aa13.3□□□□□ -0.28
COL7A1-208ENST00000470076 SAA1P0DJI8 122 aaPredicted RBP13.3□□□□□ -0.28
COL7A1-208ENST00000470076 RHOGP84095 191 aa13.3□□□□□ -0.28
COL7A1-208ENST00000470076 CDNFQ49AH0 187 aa13.3□□□□□ -0.28
COL7A1-208ENST00000470076 C22orf42Q6IC83 251 aa13.3□□□□□ -0.28
COL7A1-208ENST00000470076 KCTD9Q7L273 389 aa13.3□□□□□ -0.28
COL7A1-208ENST00000470076 NR2C2APQ86WQ0 139 aa13.3□□□□□ -0.28
COL7A1-208ENST00000470076 MMD2Q8IY49 270 aa13.3□□□□□ -0.28
COL7A1-208ENST00000470076 OR2K2Q8NGT1 345 aa13.3□□□□□ -0.28
COL7A1-208ENST00000470076 THAP7Q9BT49 309 aaPredicted RBP13.3□□□□□ -0.28
COL7A1-208ENST00000470076 DCSTAMPQ9H295 470 aa13.3□□□□□ -0.28
COL7A1-208ENST00000470076 ZNF430Q9H8G1 570 aaPredicted RBP13.3□□□□□ -0.28
COL7A1-208ENST00000470076 EDA2RQ9HAV5 297 aa13.3□□□□□ -0.28
COL7A1-208ENST00000470076 AKIP1Q9NQ31 210 aa13.3□□□□□ -0.28
COL7A1-208ENST00000470076 ELF5Q9UKW6 265 aaPredicted RBP13.3□□□□□ -0.28
COL7A1-208ENST00000470076 MRPS7Q9Y2R9 242 aaKnown RBP13.3□□□□□ -0.28
COL7A1-208ENST00000470076 PRELID3BQ9Y3B1 194 aa13.3□□□□□ -0.28
COL7A1-208ENST00000470076 OR2W1Q9Y3N9 320 aa13.3□□□□□ -0.28
COL7A1-208ENST00000470076 SACSQ9NZJ4 4579 aa13.29□□□□□ -0.28
COL7A1-208ENST00000470076 TRBV9A0A0B4J1U6 114 aa13.29□□□□□ -0.28
COL7A1-208ENST00000470076 FCGR3BO75015 233 aa13.29□□□□□ -0.28
COL7A1-208ENST00000470076 TUSC2O75896 110 aa13.29□□□□□ -0.28
COL7A1-208ENST00000470076 HLA-DQB1P01920 261 aa13.29□□□□□ -0.28
COL7A1-208ENST00000470076 CD36P16671 472 aa13.29□□□□□ -0.28
COL7A1-208ENST00000470076 ATP5G2Q06055 141 aa13.29□□□□□ -0.28
COL7A1-208ENST00000470076 EXOSC2Q13868 293 aaKnown RBP13.29□□□□□ -0.28
COL7A1-208ENST00000470076 HAGHQ16775 308 aa13.29□□□□□ -0.28
COL7A1-208ENST00000470076 HACD4Q5VWC8 232 aa13.29□□□□□ -0.28
COL7A1-208ENST00000470076 TTC9CQ8N5M4 171 aa13.29□□□□□ -0.28
COL7A1-208ENST00000470076 DCUN1D5Q9BTE7 237 aa13.29□□□□□ -0.28
COL7A1-208ENST00000470076 ST6GALNAC5Q9BVH7 336 aa13.29□□□□□ -0.28
COL7A1-208ENST00000470076 TUBA4BQ9H853 241 aa13.29□□□□□ -0.28
COL7A1-208ENST00000470076 NOTOA8MTQ0 251 aa13.28□□□□□ -0.28
COL7A1-208ENST00000470076 J3QRK9 145 aa13.28□□□□□ -0.28
COL7A1-208ENST00000470076 BMPR1BO00238 502 aa13.28□□□□□ -0.28
COL7A1-208ENST00000470076 MRPS14O60783 128 aaKnown RBP13.28□□□□□ -0.28
COL7A1-208ENST00000470076 SCGNO76038 276 aa13.28□□□□□ -0.28
COL7A1-208ENST00000470076 MECP2P51608 486 aaKnown RBP13.28□□□□□ -0.28
COL7A1-208ENST00000470076 GABARAPL2P60520 117 aa13.28□□□□□ -0.28
COL7A1-208ENST00000470076 ZNF45Q02386 682 aa13.28□□□□□ -0.28
COL7A1-208ENST00000470076 FAM209BQ5JX69 171 aa13.28□□□□□ -0.28
COL7A1-208ENST00000470076 SLC25A42Q86VD7 318 aa13.28□□□□□ -0.28
COL7A1-208ENST00000470076 NECAP1Q8NC96 275 aa13.28□□□□□ -0.28
COL7A1-208ENST00000470076 RBMX2Q9Y388 322 aaKnown RBP13.28□□□□□ -0.28
COL7A1-208ENST00000470076 PRH1P02810 166 aa13.27□□□□□ -0.29
COL7A1-208ENST00000470076 NFYAP23511 347 aaPredicted RBP13.27□□□□□ -0.29
COL7A1-208ENST00000470076 FGF9P31371 208 aaPredicted RBP13.27□□□□□ -0.29
COL7A1-208ENST00000470076 CNIH2Q6PI25 160 aa13.27□□□□□ -0.29
COL7A1-208ENST00000470076 LYSTQ99698 3801 aa13.27□□□□□ -0.29
COL7A1-208ENST00000470076 OR51E2Q9H255 320 aa13.27□□□□□ -0.29
COL7A1-208ENST00000470076 RAB26Q9ULW5 256 aa13.27□□□□□ -0.29
COL7A1-208ENST00000470076 STARD9Q9P2P6 4700 aa13.27□□□□□ -0.29
COL7A1-208ENST00000470076 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.26□□□□□ -0.29
COL7A1-208ENST00000470076 LCE6AA0A183 80 aa13.26□□□□□ -0.29
COL7A1-208ENST00000470076 SMIM30A4D0T7 59 aa13.26□□□□□ -0.29
COL7A1-208ENST00000470076 IZUMO1RA6ND01 250 aa13.26□□□□□ -0.29
COL7A1-208ENST00000470076 IFNA6P05013 189 aa13.26□□□□□ -0.29
COL7A1-208ENST00000470076 RPL30P62888 115 aaKnown RBP13.26□□□□□ -0.29
COL7A1-208ENST00000470076 C10orf55Q5SWW7 151 aa13.26□□□□□ -0.29
COL7A1-208ENST00000470076 UBE2UQ5VVX9 321 aa13.26□□□□□ -0.29
COL7A1-208ENST00000470076 ZFAND6Q6FIF0 208 aa13.26□□□□□ -0.29
COL7A1-208ENST00000470076 TPRA1Q86W33 373 aa13.26□□□□□ -0.29
COL7A1-208ENST00000470076 LAX1Q8IWV1 398 aa13.26□□□□□ -0.29
COL7A1-208ENST00000470076 OR4S2Q8NH73 311 aa13.26□□□□□ -0.29
COL7A1-208ENST00000470076 VSTM2AQ8TAG5 236 aa13.26□□□□□ -0.29
COL7A1-208ENST00000470076 NUDCD2Q8WVJ2 157 aa13.26□□□□□ -0.29
COL7A1-208ENST00000470076 KCTD12Q96CX2 325 aaKnown RBP13.26□□□□□ -0.29
COL7A1-208ENST00000470076 HSD17B10Q99714 261 aaKnown RBP13.26□□□□□ -0.29
COL7A1-208ENST00000470076 TXNL4BQ9NX01 149 aaKnown RBP13.26□□□□□ -0.29
COL7A1-208ENST00000470076 ZNF257Q9Y2Q1 563 aa13.26□□□□□ -0.29
COL7A1-208ENST00000470076 TMEM235A6NFC5 223 aa13.25□□□□□ -0.29
COL7A1-208ENST00000470076 IGLV2-14P01704 120 aa13.25□□□□□ -0.29
COL7A1-208ENST00000470076 GNG2P59768 71 aa13.25□□□□□ -0.29
COL7A1-208ENST00000470076 C15orf32Q32M92 178 aa13.25□□□□□ -0.29
COL7A1-208ENST00000470076 OR2B11Q5JQS5 317 aa13.25□□□□□ -0.29
COL7A1-208ENST00000470076 OR2A7Q96R45 310 aa13.25□□□□□ -0.29
COL7A1-208ENST00000470076 ANXA10Q9UJ72 324 aa13.25□□□□□ -0.29
COL7A1-208ENST00000470076 IGKV1D-13A0A0B4J2D9 117 aa13.24□□□□□ -0.29
COL7A1-208ENST00000470076 OR2J3O76001 311 aa13.24□□□□□ -0.29
COL7A1-208ENST00000470076 KBTBD11O94819 623 aa13.24□□□□□ -0.29
COL7A1-208ENST00000470076 IGKV1-13P0DP09 117 aa13.24□□□□□ -0.29
COL7A1-208ENST00000470076 MAS1LP35410 378 aa13.24□□□□□ -0.29
COL7A1-208ENST00000470076 CD300EQ496F6 205 aaPredicted RBP13.24□□□□□ -0.29
COL7A1-208ENST00000470076 VKORC1L1Q8N0U8 176 aa13.24□□□□□ -0.29
COL7A1-208ENST00000470076 TMEM167AQ8TBQ9 72 aa13.24□□□□□ -0.29
COL7A1-208ENST00000470076 TCTEX1D2Q8WW35 142 aa13.24□□□□□ -0.29
COL7A1-208ENST00000470076 SLC2A8Q9NY64 477 aa13.24□□□□□ -0.29
COL7A1-208ENST00000470076 DAPK2Q9UIK4 370 aa13.24□□□□□ -0.29
COL7A1-208ENST00000470076 DPPA5A6NC42 116 aa13.23□□□□□ -0.29
COL7A1-208ENST00000470076 HMX3A6NHT5 357 aa13.23□□□□□ -0.29
COL7A1-208ENST00000470076 NPIPB5A8MRT5 1133 aa13.23□□□□□ -0.29
COL7A1-208ENST00000470076 TEX22C9J3V5 150 aa13.23□□□□□ -0.29
COL7A1-208ENST00000470076 SSX5O60225 188 aa13.23□□□□□ -0.29
COL7A1-208ENST00000470076 PSMB9P28065 219 aa13.23□□□□□ -0.29
COL7A1-208ENST00000470076 RPL27AP46776 148 aaKnown RBP13.23□□□□□ -0.29
COL7A1-208ENST00000470076 CD81P60033 236 aa13.23□□□□□ -0.29
COL7A1-208ENST00000470076 EIF4EBP1Q13541 118 aaPredicted RBP13.23□□□□□ -0.29
COL7A1-208ENST00000470076 ADAMTSL5Q6ZMM2 481 aa13.23□□□□□ -0.29
COL7A1-208ENST00000470076 ZNF66Q6ZN08 573 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms