RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 CXCL2P19875 107 aa0.7□□□□□ -2.3
TPR-204ENST00000469463 CXCL3P19876 107 aa0.7□□□□□ -2.3
TPR-204ENST00000469463 SLCO1A2P46721 670 aa0.7□□□□□ -2.3
TPR-204ENST00000469463 REG1BP48304 166 aa0.7□□□□□ -2.3
TPR-204ENST00000469463 RPL30P62888 115 aaKnown RBP0.7□□□□□ -2.3
TPR-204ENST00000469463 PMS2P3Q13401 168 aa0.7□□□□□ -2.3
TPR-204ENST00000469463 SYCE1Q8N0S2 351 aa0.7□□□□□ -2.3
TPR-204ENST00000469463 TMEM86AQ8N2M4 240 aa0.7□□□□□ -2.3
TPR-204ENST00000469463 C15orf53Q8NAA6 179 aa0.7□□□□□ -2.3
TPR-204ENST00000469463 LFNGQ8NES3 379 aa0.7□□□□□ -2.3
TPR-204ENST00000469463 MBD3L1Q8WWY6 194 aa0.7□□□□□ -2.3
TPR-204ENST00000469463 RNASE6Q93091 150 aaKnown RBP0.7□□□□□ -2.3
TPR-204ENST00000469463 CHD5Q8TDI0 1954 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 TRAV7A0A075B6U4 112 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 TMED7-TICAM2A0A0A6YYA0 188 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 IGKV1-9A0A0C4DH69 117 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 A0A0D9SEW6 157 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 C5orf49A4QMS7 147 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 C9JCJ5 164 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 MRPS14O60783 128 aaKnown RBP0.69□□□□□ -2.3
TPR-204ENST00000469463 PPBPP02775 128 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 LGALS1P09382 135 aaKnown RBP0.69□□□□□ -2.3
TPR-204ENST00000469463 RPL28P46779 137 aaKnown RBP0.69□□□□□ -2.3
TPR-204ENST00000469463 SNAP25P60880 206 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 RAB14P61106 215 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 HIST1H4AP62805 103 aaKnown RBP0.69□□□□□ -2.3
TPR-204ENST00000469463 FABP5Q01469 135 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 SLAMF1Q13291 335 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 ELOBQ15370 118 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 Q1T7F1 81 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 ARHGAP11BQ3KRB8 267 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 FAM173BQ6P4H8 233 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 RIBC1Q8N443 379 aaPredicted RBP0.69□□□□□ -2.3
TPR-204ENST00000469463 TESCQ96BS2 214 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 C19orf60Q96EN9 201 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 ERMAPQ96PL5 475 aaPredicted RBP0.69□□□□□ -2.3
TPR-204ENST00000469463 ODF3Q96PU9 254 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 MED9Q9NWA0 146 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 RBM7Q9Y580 266 aaKnown RBP0.69□□□□□ -2.3
TPR-204ENST00000469463 SNURFQ9Y675 71 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 ARFGEF3Q5TH69 2177 aa0.69□□□□□ -2.3
TPR-204ENST00000469463 DIDO1Q9BTC0 2240 aaKnown RBP0.68□□□□□ -2.3
TPR-204ENST00000469463 HAAOP46952 286 aa0.68□□□□□ -2.3
TPR-204ENST00000469463 HLA-DRB3P79483 266 aa0.68□□□□□ -2.3
TPR-204ENST00000469463 SAPCD1Q5SSQ6 148 aa0.68□□□□□ -2.3
TPR-204ENST00000469463 ZNF676Q8N7Q3 588 aa0.68□□□□□ -2.3
TPR-204ENST00000469463 OR5B17Q8NGF7 314 aa0.68□□□□□ -2.3
TPR-204ENST00000469463 OR5L1Q8NGL2 311 aa0.68□□□□□ -2.3
TPR-204ENST00000469463 NDEL1Q9GZM8 345 aa0.68□□□□□ -2.3
TPR-204ENST00000469463 TEX50A0A1B0GTY4 177 aa0.67□□□□□ -2.3
TPR-204ENST00000469463 YKT6O15498 198 aa0.67□□□□□ -2.3
TPR-204ENST00000469463 MSNP26038 577 aaKnown RBP0.67□□□□□ -2.3
TPR-204ENST00000469463 MIPP30301 263 aa0.67□□□□□ -2.3
TPR-204ENST00000469463 CLDN12P56749 244 aa0.67□□□□□ -2.3
TPR-204ENST00000469463 GPHB5Q86YW7 130 aa0.67□□□□□ -2.3
TPR-204ENST00000469463 RPP25LQ8N5L8 163 aaKnown RBP0.67□□□□□ -2.3
TPR-204ENST00000469463 TBC1D19Q8N5T2 526 aa0.67□□□□□ -2.3
TPR-204ENST00000469463 ANKRD36BP1Q96IX9 119 aa0.67□□□□□ -2.3
TPR-204ENST00000469463 PACRGQ96M98 296 aaPredicted RBP0.67□□□□□ -2.3
TPR-204ENST00000469463 DCUN1D5Q9BTE7 237 aa0.67□□□□□ -2.3
TPR-204ENST00000469463 CXorf21Q9HAI6 301 aa0.67□□□□□ -2.3
TPR-204ENST00000469463 HES4Q9HCC6 221 aa0.67□□□□□ -2.3
TPR-204ENST00000469463 HEATR5BQ9P2D3 2071 aa0.67□□□□□ -2.3
TPR-204ENST00000469463 LRPPRCP42704 1394 aaKnown RBP0.67□□□□□ -2.3
TPR-204ENST00000469463 NUP160Q12769 1436 aa0.66□□□□□ -2.3
TPR-204ENST00000469463 MEIS3P1A6NDR6 274 aa0.66□□□□□ -2.3
TPR-204ENST00000469463 TRPC5OSA6NMA1 111 aa0.66□□□□□ -2.3
TPR-204ENST00000469463 MKRN2OSH3BPM6 223 aa0.66□□□□□ -2.3
TPR-204ENST00000469463 TOX3O15405 576 aaPredicted RBP0.66□□□□□ -2.3
TPR-204ENST00000469463 SCN2BO60939 215 aa0.66□□□□□ -2.3
TPR-204ENST00000469463 BRI3O95415 125 aa0.66□□□□□ -2.3
TPR-204ENST00000469463 IL6P05231 212 aa0.66□□□□□ -2.3
TPR-204ENST00000469463 PRB4P10163 310 aaPredicted RBP0.66□□□□□ -2.3
TPR-204ENST00000469463 CTAG1AP78358 180 aa0.66□□□□□ -2.3
TPR-204ENST00000469463 CDK10Q15131 360 aa0.66□□□□□ -2.3
TPR-204ENST00000469463 HIST2H3AQ71DI3 136 aa0.66□□□□□ -2.3
TPR-204ENST00000469463 DYNAPQ8N1N2 210 aa0.66□□□□□ -2.3
TPR-204ENST00000469463 CPAMD8Q8IZJ3 1885 aa0.66□□□□□ -2.3
TPR-204ENST00000469463 PTPRSQ13332 1948 aa0.66□□□□□ -2.3
TPR-204ENST00000469463 ERICH2A1L162 156 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 TRAPPC13A5PLN9 417 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 FTCDNL1E5RQL4 147 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 SDCBPO00560 298 aaPredicted RBP0.65□□□□□ -2.31
TPR-204ENST00000469463 COX7A2LO14548 114 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 NPPAP01160 153 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 ORM1P02763 201 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 UGT2B7P16662 529 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 EVX1P49640 407 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 EBPQ15125 230 aaKnown RBP0.65□□□□□ -2.31
TPR-204ENST00000469463 DCXRQ7Z4W1 244 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 OR8B3Q8NGG8 313 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 SLC37A2Q8TED4 501 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 GNPNAT1Q96EK6 184 aaPredicted RBP0.65□□□□□ -2.31
TPR-204ENST00000469463 SERPINI1Q99574 410 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 REG4Q9BYZ8 158 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 DERL2Q9GZP9 239 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 CHST6Q9GZX3 395 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 MS4A6AQ9H2W1 248 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 HRASLSQ9HDD0 168 aa0.65□□□□□ -2.31
TPR-204ENST00000469463 SIPA1L1O43166 1804 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms