RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 CITED1Q99966 193 aa9.43□□□□□ -0.9
VPS13D-204ENST00000469054 OR51J1Q9H342 316 aa9.43□□□□□ -0.9
VPS13D-204ENST00000469054 HRASLSQ9HDD0 168 aa9.43□□□□□ -0.9
VPS13D-204ENST00000469054 AKIP1Q9NQ31 210 aa9.43□□□□□ -0.9
VPS13D-204ENST00000469054 SLC2A9Q9NRM0 540 aa9.43□□□□□ -0.9
VPS13D-204ENST00000469054 TPSG1Q9NRR2 321 aa9.43□□□□□ -0.9
VPS13D-204ENST00000469054 LINC00527Q9UJ94 153 aa9.43□□□□□ -0.9
VPS13D-204ENST00000469054 SCP2D1Q9UJQ7 156 aa9.43□□□□□ -0.9
VPS13D-204ENST00000469054 DNHD1Q96M86 4753 aa9.43□□□□□ -0.9
VPS13D-204ENST00000469054 MPPED1O15442 326 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 HPRT1P00492 218 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 CA2P00918 260 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 HRASP01112 189 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 IGF1P05019 195 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 SAA1P0DJI8 122 aaPredicted RBP9.42□□□□□ -0.9
VPS13D-204ENST00000469054 PI3P19957 117 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 F2RP25116 425 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 PIGPP57054 158 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 RND3P61587 244 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 CX3CL1P78423 397 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 SURF2Q15527 256 aaPredicted RBP9.42□□□□□ -0.9
VPS13D-204ENST00000469054 TRIQKQ629K1 86 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 ZNF57Q68EA5 555 aaPredicted RBP9.42□□□□□ -0.9
VPS13D-204ENST00000469054 ZNF562Q6V9R5 426 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 TBC1D26Q86UD7 250 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 PPP1R27Q86WC6 154 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 TCTEX1D1Q8N7M0 179 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 OR5AU1Q8NGC0 362 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 OR13C8Q8NGS7 320 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 MARCH1Q8TCQ1 289 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 CHPT1Q8WUD6 406 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 PLEKHA2Q9HB19 425 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 ZNF580Q9UK33 172 aa9.42□□□□□ -0.9
VPS13D-204ENST00000469054 CTSDP07339 412 aaPredicted RBP9.41□□□□□ -0.9
VPS13D-204ENST00000469054 INPP1P49441 399 aa9.41□□□□□ -0.9
VPS13D-204ENST00000469054 TAS2R31P59538 309 aa9.41□□□□□ -0.9
VPS13D-204ENST00000469054 NDPQ00604 133 aa9.41□□□□□ -0.9
VPS13D-204ENST00000469054 ZNF585BQ52M93 769 aa9.41□□□□□ -0.9
VPS13D-204ENST00000469054 ZNF329Q86UD4 541 aa9.41□□□□□ -0.9
VPS13D-204ENST00000469054 VKORC1L1Q8N0U8 176 aa9.41□□□□□ -0.9
VPS13D-204ENST00000469054 C11orf44Q8N8P7 122 aa9.41□□□□□ -0.9
VPS13D-204ENST00000469054 VSTM2AQ8TAG5 236 aa9.41□□□□□ -0.9
VPS13D-204ENST00000469054 S100ZQ8WXG8 99 aa9.41□□□□□ -0.9
VPS13D-204ENST00000469054 SCGB3A2Q96PL1 93 aa9.41□□□□□ -0.9
VPS13D-204ENST00000469054 AIFM2Q9BRQ8 373 aa9.41□□□□□ -0.9
VPS13D-204ENST00000469054 GON7Q9BXV9 100 aa9.41□□□□□ -0.9
VPS13D-204ENST00000469054 COPZ2Q9P299 210 aa9.41□□□□□ -0.9
VPS13D-204ENST00000469054 GPR132Q9UNW8 380 aa9.41□□□□□ -0.9
VPS13D-204ENST00000469054 PSMB11A5LHX3 300 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 ARPC1BO15143 372 aaKnown RBP9.4□□□□□ -0.9
VPS13D-204ENST00000469054 ATP6V0E1O15342 81 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 FBXO24O75426 580 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 OR2A4O95047 310 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 S1PR2O95136 353 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 IL7P13232 177 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 NQO2P16083 231 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 VDAC1P21796 283 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 LPAR6P43657 344 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 SLC35B1P78383 322 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 PJVKQ0ZLH3 352 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 FXYD3Q14802 87 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 POU2AF1Q16633 256 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 PRSS8Q16651 343 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 MRGPRG-AS1Q2M3A8 158 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 C10orf99Q6UWK7 81 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 SSX9Q7RTT3 188 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 PUSL1Q8N0Z8 303 aaKnown RBP9.4□□□□□ -0.9
VPS13D-204ENST00000469054 CCDC71LQ8N9Z2 235 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 RHOVQ96L33 236 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 OR2A7Q96R45 310 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 RTBDNQ9BSG5 229 aaPredicted RBP9.4□□□□□ -0.9
VPS13D-204ENST00000469054 C5orf66Q9H5L9 145 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 PARP11Q9NR21 331 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 FAM212BQ9NTI7 297 aaPredicted RBP9.4□□□□□ -0.9
VPS13D-204ENST00000469054 COMMD9Q9P000 198 aa9.4□□□□□ -0.9
VPS13D-204ENST00000469054 C14orf166Q9Y224 244 aaKnown RBP9.4□□□□□ -0.9
VPS13D-204ENST00000469054 CREBL2O60519 120 aaPredicted RBP9.39□□□□□ -0.91
VPS13D-204ENST00000469054 CNIH1O95406 144 aa9.39□□□□□ -0.91
VPS13D-204ENST00000469054 CD28P10747 220 aa9.39□□□□□ -0.91
VPS13D-204ENST00000469054 EGR2P11161 476 aaPredicted RBP9.39□□□□□ -0.91
VPS13D-204ENST00000469054 CRIP2P52943 208 aaPredicted RBP9.39□□□□□ -0.91
VPS13D-204ENST00000469054 GNB1P62873 340 aa9.39□□□□□ -0.91
VPS13D-204ENST00000469054 SSBP2P81877 361 aaPredicted RBP9.39□□□□□ -0.91
VPS13D-204ENST00000469054 CFHR3Q02985 330 aa9.39□□□□□ -0.91
VPS13D-204ENST00000469054 COMMD1Q8N668 190 aa9.39□□□□□ -0.91
VPS13D-204ENST00000469054 OR4X2Q8NGF9 303 aa9.39□□□□□ -0.91
VPS13D-204ENST00000469054 SGMS2Q8NHU3 365 aa9.39□□□□□ -0.91
VPS13D-204ENST00000469054 ABHD5Q8WTS1 349 aa9.39□□□□□ -0.91
VPS13D-204ENST00000469054 ARPC1AQ92747 370 aa9.39□□□□□ -0.91
VPS13D-204ENST00000469054 R3HDM4Q96D70 268 aa9.39□□□□□ -0.91
VPS13D-204ENST00000469054 CITED2Q99967 270 aaPredicted RBP9.39□□□□□ -0.91
VPS13D-204ENST00000469054 FAM103A1Q9BTL3 118 aaKnown RBP9.39□□□□□ -0.91
VPS13D-204ENST00000469054 CCDC32Q9BV29 185 aa9.39□□□□□ -0.91
VPS13D-204ENST00000469054 BET1LQ9NYM9 111 aa9.39□□□□□ -0.91
VPS13D-204ENST00000469054 FBXO7Q9Y3I1 522 aa9.39□□□□□ -0.91
VPS13D-204ENST00000469054 NUBP2Q9Y5Y2 271 aa9.39□□□□□ -0.91
VPS13D-204ENST00000469054 WSB1Q9Y6I7 421 aa9.39□□□□□ -0.91
VPS13D-204ENST00000469054 TRAV41A0A0B4J266 112 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 C3orf85A0A1B0GTC6 90 aa9.38□□□□□ -0.91
VPS13D-204ENST00000469054 LINC00854A0A1B0GVQ3 168 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms