RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 LDLRAD2Q5SZI1 272 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 TMEM268Q5VZI3 342 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 THOC7Q6I9Y2 204 aaKnown RBP6.53□□□□□ -1.36
HDAC6-216ENST00000468949 SSX9Q7RTT3 188 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 UXS1Q8NBZ7 420 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 OR8H1Q8NGG4 311 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 RBPMSQ93062 196 aaKnown RBP6.53□□□□□ -1.36
HDAC6-216ENST00000468949 TMEM230Q96A57 120 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 R3HDM4Q96D70 268 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 GALNT14Q96FL9 552 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 TP53RKQ96S44 253 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 MARVELD1Q9BSK0 173 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 SLC25A33Q9BSK2 321 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 TMEM222Q9H0R3 208 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 ALX4Q9H161 411 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-216ENST00000468949 PLEKHA2Q9HB19 425 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 FAM212BQ9NTI7 297 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-216ENST00000468949 VPREB3Q9UKI3 123 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 TCF19Q9Y242 345 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 MOB4Q9Y3A3 225 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 POMT1Q9Y6A1 747 aa6.53□□□□□ -1.36
HDAC6-216ENST00000468949 C9orf170A2RU37 121 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 MARCH11A6NNE9 402 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 M0QZK8 103 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 NBR2O15453 112 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 RAMP3O60896 148 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 SNAPC5O75971 98 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 ACTL6BO94805 426 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 SPDEFO95238 335 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 DUS4LO95620 317 aaKnown RBP6.52□□□□□ -1.37
HDAC6-216ENST00000468949 IFNA21P01568 189 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 IGHV4-59P01825 116 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 IGKV1-16P04430 117 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 IL5P05113 134 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 SPNP16150 400 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 UCP1P25874 307 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 LGALS7P47929 136 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 LINC00205P59089 165 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 EIF4EBP1Q13541 118 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-216ENST00000468949 HABP2Q14520 560 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-216ENST00000468949 OXA1LQ15070 435 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 TATDN3Q17R31 274 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 LIN54Q6MZP7 749 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 Q6YL49 198 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 H2BFWTQ7Z2G1 175 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 C16orf82Q7Z2V1 217 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 TMEM219Q86XT9 240 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 THNSL2Q86YJ6 484 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 TMEM86BQ8N661 226 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 ZNF431Q8TF32 576 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-216ENST00000468949 CHPT1Q8WUD6 406 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 DDB2Q92466 427 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 CFHR4Q92496 578 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 IL22RA2Q969J5 263 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 EAF1Q96JC9 268 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-216ENST00000468949 RNF5Q99942 180 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 RASL11BQ9BPW5 248 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 SEC22CQ9BRL7 303 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 PDCD10Q9BUL8 212 aa6.52□□□□□ -1.37
HDAC6-216ENST00000468949 SOX21Q9Y651 276 aaPredicted RBP6.52□□□□□ -1.37
HDAC6-216ENST00000468949 DUXBA0A1W2PPF3 345 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 DNAJC9-AS1A6NH13 148 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 SNRPGP15A8MWD9 76 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 FAM25EA8MYX2 175 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 TCF21O43680 179 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 SLC25A17O43808 307 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 PROP1O75360 226 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 OR2F2O95006 317 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 KRASP01116 189 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 CRYBA1P05813 215 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 VSIG10L2P0DP72 767 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 G6PCP35575 357 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 IER3P46695 156 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 MECP2P51608 486 aaKnown RBP6.51□□□□□ -1.37
HDAC6-216ENST00000468949 TMEM187Q14656 261 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 TMEM177Q53S58 311 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 FAM219AQ8IW50 185 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 C12orf45Q8N5I9 185 aaPredicted RBP6.51□□□□□ -1.37
HDAC6-216ENST00000468949 OR52B4Q8NGK2 314 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 ABHD5Q8WTS1 349 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 AJUBAQ96IF1 538 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 RHOVQ96L33 236 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 ZNF48Q96MX3 618 aaPredicted RBP6.51□□□□□ -1.37
HDAC6-216ENST00000468949 DUX5Q96PT3 197 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 SPIN2AQ99865 258 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 SPIN2BQ9BPZ2 258 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 NPFFR1Q9GZQ6 430 aa6.51□□□□□ -1.37
HDAC6-216ENST00000468949 METTL1Q9UBP6 276 aaKnown RBP6.51□□□□□ -1.37
HDAC6-216ENST00000468949 A0A0A6YYJ9 748 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 A0A0B4J2A0 478 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 FAM90A9PA6NNJ1 464 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 RRHO14718 337 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 EREGO14944 169 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 OR2A4O95047 310 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 CNIH1O95406 144 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 HOXB5P09067 269 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 SAA1P0DJI8 122 aaPredicted RBP6.5□□□□□ -1.37
HDAC6-216ENST00000468949 VDAC1P21796 283 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 UBE2KP61086 200 aa6.5□□□□□ -1.37
HDAC6-216ENST00000468949 GNB1P62873 340 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms