RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 RNASE6Q93091 150 aaKnown RBP11.64□□□□□ -0.55
BRAT1-203ENST00000467558 SPSB4Q96A44 273 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 VKORC1Q9BQB6 163 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 LOC105371242A0A075B767 164 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 KBTBD11-OT1A0A1B0GTJ5 212 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 DLL1O00548 723 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 HYPMO75409 117 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 MEF2CQ06413 473 aaPredicted RBP11.64□□□□□ -0.55
BRAT1-203ENST00000467558 PLA2G2CQ5R387 149 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.64□□□□□ -0.55
BRAT1-203ENST00000467558 PLPPR1Q8TBJ4 325 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 PCNX1Q96RV3 2341 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 FOXL2NBQ6ZUU3 175 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 IGHG3P01860 377 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 TMEM204Q9BSN7 226 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 QTRT1Q9BXR0 403 aaKnown RBP11.63□□□□□ -0.55
BRAT1-203ENST00000467558 PLXND1Q9Y4D7 1925 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 DOCK7Q96N67 2140 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 H0Y8G0 127 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 ECSCRQ19T08 205 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 RPEL1Q2QD12 228 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 TRBV23-1A0A0A0MS06 115 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 TRAV24A0A0B4J272 114 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 MSGN1A6NI15 193 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 FAM74A7A6NL05 159 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 FCN1O00602 326 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 DANCRP0C864 163 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 MEF2BQ02080 365 aaPredicted RBP11.63□□□□□ -0.55
BRAT1-203ENST00000467558 RPL39P5Q59GN2 51 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 LAMTOR1Q6IAA8 161 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 CYB561D1Q8N8Q1 229 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 STARD4Q96DR4 205 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 HSPB1P04792 205 aaKnown RBP11.63□□□□□ -0.55
BRAT1-203ENST00000467558 HCP5Q6MZN7 132 aa11.63□□□□□ -0.55
BRAT1-203ENST00000467558 MRPL37Q9BZE1 423 aaKnown RBP11.63□□□□□ -0.55
BRAT1-203ENST00000467558 CACNA1BQ00975 2339 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 HEATR1Q9H583 2144 aaKnown RBP11.62□□□□□ -0.55
BRAT1-203ENST00000467558 MFSD2BA6NFX1 497 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 SPINK4O60575 86 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 LINC00869P0C866 280 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 VKORC1L1Q8N0U8 176 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 OR5R1Q8NH85 324 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 OSR1Q8TAX0 266 aaPredicted RBP11.62□□□□□ -0.55
BRAT1-203ENST00000467558 NEU4Q8WWR8 484 aaPredicted RBP11.62□□□□□ -0.55
BRAT1-203ENST00000467558 DCTN5Q9BTE1 182 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 MPDZO75970 2070 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 IGHV3-21A0A0B4J1V1 117 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 SUMO1P63165 101 aaKnown RBP11.62□□□□□ -0.55
BRAT1-203ENST00000467558 ZNF146Q15072 292 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 COX19Q49B96 90 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 WDR73Q6P4I2 378 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 PQLC2Q6ZP29 291 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 Q6ZS92 163 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 TMEM56-RWDD3S4R434 201 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 ZNF497Q6ZNH5 498 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 DNM1P46Q6ZS02 220 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 GLRX5Q86SX6 157 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 FAM222BQ8WU58 562 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 PAXXQ9BUH6 204 aa11.62□□□□□ -0.55
BRAT1-203ENST00000467558 SNRPEP62304 92 aaKnown RBP11.61□□□□□ -0.55
BRAT1-203ENST00000467558 FAM122AQ96E09 287 aa11.61□□□□□ -0.55
BRAT1-203ENST00000467558 LINC00312Q9Y6C7 94 aa11.61□□□□□ -0.55
BRAT1-203ENST00000467558 DENND4CQ5VZ89 1909 aa11.61□□□□□ -0.55
BRAT1-203ENST00000467558 MPTX1A8MV57 137 aa11.61□□□□□ -0.55
BRAT1-203ENST00000467558 SRSF10O75494 262 aaKnown RBP11.61□□□□□ -0.55
BRAT1-203ENST00000467558 ATP5J2P56134 94 aa11.61□□□□□ -0.55
BRAT1-203ENST00000467558 TMEM42Q69YG0 159 aa11.61□□□□□ -0.55
BRAT1-203ENST00000467558 PNKDQ8N490 385 aa11.61□□□□□ -0.55
BRAT1-203ENST00000467558 HIGD1AQ9Y241 93 aa11.61□□□□□ -0.55
BRAT1-203ENST00000467558 MIC13Q5XKP0 118 aa11.61□□□□□ -0.55
BRAT1-203ENST00000467558 FAM216AQ8WUB2 273 aa11.61□□□□□ -0.55
BRAT1-203ENST00000467558 DPF1Q92782 380 aa11.61□□□□□ -0.55
BRAT1-203ENST00000467558 RAB24Q969Q5 203 aa11.61□□□□□ -0.55
BRAT1-203ENST00000467558 SNRNP40Q96DI7 357 aaKnown RBP11.61□□□□□ -0.55
BRAT1-203ENST00000467558 PSMG3Q9BT73 122 aaPredicted RBP11.61□□□□□ -0.55
BRAT1-203ENST00000467558 ZNF430Q9H8G1 570 aaPredicted RBP11.61□□□□□ -0.55
BRAT1-203ENST00000467558 C17orf98A8MV24 154 aa11.61□□□□□ -0.55
BRAT1-203ENST00000467558 TPPP2P59282 170 aa11.61□□□□□ -0.55
BRAT1-203ENST00000467558 C12orf57Q99622 126 aa11.61□□□□□ -0.55
BRAT1-203ENST00000467558 FAM103A1Q9BTL3 118 aaKnown RBP11.61□□□□□ -0.55
BRAT1-203ENST00000467558 IGKV1-27A0A075B6S5 117 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 IGKV1D-8A0A087WSZ0 117 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 IGKV1D-13A0A0B4J2D9 117 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.6□□□□□ -0.55
BRAT1-203ENST00000467558 IGSF23A1L1A6 192 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 C5orf63A6NC05 138 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 RNF222A6NCQ9 220 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 IGKV1-13P0DP09 117 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 RND2P52198 227 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 SRSF6Q13247 344 aaKnown RBP11.6□□□□□ -0.55
BRAT1-203ENST00000467558 TBR1Q16650 682 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 PIMREGQ9BSJ6 248 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 SH3BGRL3Q9H299 93 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 PARD6AQ9NPB6 346 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 PTBP3O95758 552 aaKnown RBP11.6□□□□□ -0.55
BRAT1-203ENST00000467558 GAMTQ14353 236 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 ZNF788Q6ZQV5 615 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 WDR31Q8NA23 367 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 TRAV14DV4A0A0A6YYC5 116 aa11.6□□□□□ -0.55
BRAT1-203ENST00000467558 FOXH1O75593 365 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms