RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 OOSP1A8MZH6 123 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 K7EPK0 472 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 TIMM23O14925 209 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 NPFFO15130 113 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 ATG12O94817 140 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 IGLV2-23P01705 113 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 IGHV1-69P01742 117 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 PAX6P26367 422 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 SAA4P35542 130 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 CEACAM3P40198 252 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 RELBQ01201 579 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 FGL1Q08830 312 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 AARDQ4LEZ3 155 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 FBLN7Q53RD9 439 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 CXorf66Q5JRM2 361 aaPredicted RBP10.46□□□□□ -0.73
COL4A1-202ENST00000467182 KLF17Q5JT82 389 aaPredicted RBP10.46□□□□□ -0.73
COL4A1-202ENST00000467182 RUSC1-AS1Q66K80 236 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 PRSS54Q6PEW0 395 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 MOB3BQ86TA1 216 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 PUSL1Q8N0Z8 303 aaKnown RBP10.46□□□□□ -0.73
COL4A1-202ENST00000467182 OR8H3Q8N146 312 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 C9orf62Q8N4C0 152 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 FAM71E2Q8N5Q1 922 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 DMBX1Q8NFW5 382 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 OSR1Q8TAX0 266 aaPredicted RBP10.46□□□□□ -0.73
COL4A1-202ENST00000467182 TMEM140Q9NV12 185 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 OR5AC2Q9NZP5 309 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 RCL1Q9Y2P8 373 aaKnown RBP10.46□□□□□ -0.73
COL4A1-202ENST00000467182 POMT1Q9Y6A1 747 aa10.46□□□□□ -0.73
COL4A1-202ENST00000467182 SVEP1Q4LDE5 3571 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 HECTD1Q9ULT8 2610 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.45□□□□□ -0.74
COL4A1-202ENST00000467182 WNK2Q9Y3S1 2297 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 TRAV40A0A0B4J280 105 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 HMSDA8MTL9 139 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 J3QLI3 93 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 DEDDO75618 318 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 VENTXO95231 258 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 HRASP01112 189 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 TGFAP01135 160 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 IGHV4-38-2P0DP08 117 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 CD1BP29016 333 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 ARHGDIBP52566 201 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 MRGPRG-AS1Q2M3A8 158 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 THOC7Q6I9Y2 204 aaKnown RBP10.45□□□□□ -0.74
COL4A1-202ENST00000467182 OR4A47Q6IF82 309 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 TMEM65Q6PI78 240 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 SSX9Q7RTT3 188 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 H2BFWTQ7Z2G1 175 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 OR1S1Q8NH92 325 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 RNASE11Q8TAA1 199 aaKnown RBP10.45□□□□□ -0.74
COL4A1-202ENST00000467182 FLYWCH2Q96CP2 140 aaKnown RBP10.45□□□□□ -0.74
COL4A1-202ENST00000467182 MALSU1Q96EH3 234 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 RHOVQ96L33 236 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 MBD2Q9UBB5 411 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 ITPR2Q14571 2701 aa10.45□□□□□ -0.74
COL4A1-202ENST00000467182 IGHV3OR16-10A0A075B7F0 116 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 H7C2Y5 167 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 SHOXO15266 292 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 ST8SIA3O43173 380 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 SCGB1D2O95969 90 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 FSHBP01225 129 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 CRYGBP07316 175 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 SAA1P0DJI8 122 aaPredicted RBP10.44□□□□□ -0.74
COL4A1-202ENST00000467182 CXCL2P19875 107 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 NKX2-1P43699 371 aaPredicted RBP10.44□□□□□ -0.74
COL4A1-202ENST00000467182 RAB13P51153 203 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 LGALS4P56470 323 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 S100A10P60903 97 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 POLR2GP62487 172 aaKnown RBP eCLIP10.44□□□□□ -0.74
COL4A1-202ENST00000467182 SSX2Q16385 188 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 LGALSLQ3ZCW2 172 aaPredicted RBP10.44□□□□□ -0.74
COL4A1-202ENST00000467182 OR4C13Q8NGP0 309 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 HARBI1Q96MB7 349 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 MS4A7Q9GZW8 240 aaPredicted RBP10.44□□□□□ -0.74
COL4A1-202ENST00000467182 BET1LQ9NYM9 111 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 HSPB7Q9UBY9 170 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 TNFSF18Q9UNG2 199 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 NSG2Q9Y328 171 aa10.44□□□□□ -0.74
COL4A1-202ENST00000467182 LSM5Q9Y4Y9 91 aaKnown RBP10.44□□□□□ -0.74
COL4A1-202ENST00000467182 TET2Q6N021 2002 aaPredicted RBP10.43□□□□□ -0.74
COL4A1-202ENST00000467182 FXYD6-FXYD2A0A087WZ82 144 aa10.43□□□□□ -0.74
COL4A1-202ENST00000467182 FAM90A26D6RGX4 464 aa10.43□□□□□ -0.74
COL4A1-202ENST00000467182 UPK2O00526 184 aa10.43□□□□□ -0.74
COL4A1-202ENST00000467182 NXPH3O95157 252 aa10.43□□□□□ -0.74
COL4A1-202ENST00000467182 TMEM50AO95807 157 aa10.43□□□□□ -0.74
COL4A1-202ENST00000467182 CNTFRP26992 372 aa10.43□□□□□ -0.74
COL4A1-202ENST00000467182 PAX9P55771 341 aa10.43□□□□□ -0.74
COL4A1-202ENST00000467182 ERVK-16P61578 105 aa10.43□□□□□ -0.74
COL4A1-202ENST00000467182 RPS16P62249 146 aaKnown RBP10.43□□□□□ -0.74
COL4A1-202ENST00000467182 KRTAP1-1Q07627 177 aa10.43□□□□□ -0.74
COL4A1-202ENST00000467182 EBI3Q14213 229 aa10.43□□□□□ -0.74
COL4A1-202ENST00000467182 CYB5R2Q6BCY4 276 aa10.43□□□□□ -0.74
COL4A1-202ENST00000467182 FOXRED2Q8IWF2 684 aa10.43□□□□□ -0.74
COL4A1-202ENST00000467182 Q8N6K4 173 aa10.43□□□□□ -0.74
COL4A1-202ENST00000467182 THAP6Q8TBB0 222 aa10.43□□□□□ -0.74
COL4A1-202ENST00000467182 QTRT1Q9BXR0 403 aaKnown RBP10.43□□□□□ -0.74
COL4A1-202ENST00000467182 MAGT1Q9H0U3 335 aa10.43□□□□□ -0.74
COL4A1-202ENST00000467182 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.43□□□□□ -0.74
COL4A1-202ENST00000467182 SOX21Q9Y651 276 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms