RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 H3BPC8 53 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 J3QRE1 110 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 LST1O00453 97 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 PLA2G10O15496 165 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 BPGMP07738 259 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 FAM228BP0C875 321 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 CSRP1P21291 193 aaKnown RBP1.92□□□□□ -2.1
VPS13A-209ENST00000467124 RPL27AP46776 148 aaKnown RBP1.92□□□□□ -2.1
VPS13A-209ENST00000467124 MARCKSL1P49006 195 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 ZNF140P52738 457 aaPredicted RBP1.92□□□□□ -2.1
VPS13A-209ENST00000467124 CEBPGP53567 150 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 TNFAIP6P98066 277 aaPredicted RBP1.92□□□□□ -2.1
VPS13A-209ENST00000467124 HOXC5Q00444 222 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 IFITM2Q01629 132 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 OR2F1Q13607 317 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 BATFQ16520 125 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 ALKAL1Q6UXT8 129 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 TCF24Q7RTU0 167 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 DEFB125Q8N687 156 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 OR4X1Q8NH49 305 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 OPTNQ96CV9 577 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 UCK1Q9HA47 277 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 ANGPT4Q9Y264 503 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 ATG2BQ96BY7 2078 aa1.92□□□□□ -2.1
VPS13A-209ENST00000467124 ZFYVE9O95405 1425 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 NAV1Q8NEY1 1877 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 A0A1W2PQD3 144 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 A8MUN3 132 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 EEF1E1-BLOC1S5C9J1V9 151 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 I3L521 148 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 GNRH2O43555 120 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 RPP14O95059 124 aaKnown RBP1.91□□□□□ -2.1
VPS13A-209ENST00000467124 SERPINA6P08185 405 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 DEFA4P12838 97 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 XCL1P47992 114 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 HINT1P49773 126 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-209ENST00000467124 RAB13P51153 203 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 LSM6P62312 80 aaKnown RBP1.91□□□□□ -2.1
VPS13A-209ENST00000467124 PMAIP1Q13794 54 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 TNFAIP8L3Q5GJ75 292 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-209ENST00000467124 OR51T1Q8NGJ9 327 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 SLC35B4Q969S0 331 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 TMA16Q96EY4 203 aaKnown RBP1.91□□□□□ -2.1
VPS13A-209ENST00000467124 PPP1R2P1Q96PQ5 205 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 PAQR5Q9NXK6 330 aaPredicted RBP1.91□□□□□ -2.1
VPS13A-209ENST00000467124 PRELID1Q9Y255 219 aa1.91□□□□□ -2.1
VPS13A-209ENST00000467124 PLB1Q6P1J6 1458 aa1.9□□□□□ -2.11
VPS13A-209ENST00000467124 DHX57Q6P158 1386 aaKnown RBP1.9□□□□□ -2.11
VPS13A-209ENST00000467124 IGHV3-15A0A0B4J1V0 119 aa1.9□□□□□ -2.11
VPS13A-209ENST00000467124 A0A1W2PQL4 384 aaPredicted RBP1.9□□□□□ -2.11
VPS13A-209ENST00000467124 RFPL4AA6NLU0 287 aa1.9□□□□□ -2.11
VPS13A-209ENST00000467124 TMEM114B3SHH9 223 aa1.9□□□□□ -2.11
VPS13A-209ENST00000467124 DISC1C4P0D8 188 aa1.9□□□□□ -2.11
VPS13A-209ENST00000467124 RFPL4AL1F8VTS6 287 aa1.9□□□□□ -2.11
VPS13A-209ENST00000467124 GOLGA6L19H0YKK7 550 aa1.9□□□□□ -2.11
VPS13A-209ENST00000467124 TCRBP04435 133 aa1.9□□□□□ -2.11
VPS13A-209ENST00000467124 TFPTP0C1Z6 253 aa1.9□□□□□ -2.11
VPS13A-209ENST00000467124 ZNF728P0DKX0 622 aa1.9□□□□□ -2.11
VPS13A-209ENST00000467124 FGF6P10767 208 aa1.9□□□□□ -2.11
VPS13A-209ENST00000467124 RBM11P57052 281 aaKnown RBP1.9□□□□□ -2.11
VPS13A-209ENST00000467124 OR4X2Q8NGF9 303 aa1.9□□□□□ -2.11
VPS13A-209ENST00000467124 CLDND2Q8NHS1 167 aa1.9□□□□□ -2.11
VPS13A-209ENST00000467124 DGCR14Q96DF8 476 aaKnown RBP1.9□□□□□ -2.11
VPS13A-209ENST00000467124 IMP4Q96G21 291 aaKnown RBP1.9□□□□□ -2.11
VPS13A-209ENST00000467124 ERMAPQ96PL5 475 aaPredicted RBP1.9□□□□□ -2.11
VPS13A-209ENST00000467124 RBM7Q9Y580 266 aaKnown RBP1.9□□□□□ -2.11
VPS13A-209ENST00000467124 SNAPC4Q5SXM2 1469 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 TRGV4A0A0C4DH28 118 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 IGHV1-69-2A0A0G2JMI3 117 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 H3BT86 120 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 CHP2O43745 196 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 NSA2O95478 260 aaKnown RBP1.89□□□□□ -2.11
VPS13A-209ENST00000467124 P0DMU3 169 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 FAM231AP0DMU4 169 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 FAM231CP0DMU5 169 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 SULT1A1P50225 295 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 RAB5BP61020 215 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 RANP62826 216 aaKnown RBP1.89□□□□□ -2.11
VPS13A-209ENST00000467124 GUK1Q16774 197 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 AGTRAPQ6RW13 159 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 SLC22A24Q8N4F4 322 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 TBC1D19Q8N5T2 526 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 OR1L8Q8NGR8 309 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 ZNF675Q8TD23 568 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 CNBD2Q96M20 576 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 IMMP2LQ96T52 175 aa1.89□□□□□ -2.11
VPS13A-209ENST00000467124 ABCC12Q96J65 1359 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 CLDN24A6NM45 220 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 ZNF878C9JN71 531 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 NDUFB2O95178 105 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 KCNE1P15382 129 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 PEBP1P30086 187 aaKnown RBP1.88□□□□□ -2.11
VPS13A-209ENST00000467124 S100A7P31151 101 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 TAS2R20P59543 309 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 STX5Q13190 355 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 SS18Q15532 418 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 KCNJ8Q15842 424 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 RGS21Q2M5E4 152 aa1.88□□□□□ -2.11
VPS13A-209ENST00000467124 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms