RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CCL26Q9Y258 94 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 TIMM22Q9Y584 194 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 PLCH2O75038 1416 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 ROCK1Q13464 1354 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 A0A087WUJ7 227 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 A0A0J9YX75 114 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 C5orf49A4QMS7 147 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 C17orf51A8MQB3 221 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 H3BQV1 296 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 KRT75O95678 551 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 MT-CO2P00403 227 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 SOD1P00441 154 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 DDTP30046 118 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 OMPP47874 163 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 GABRA4P48169 554 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 TCL1AP56279 114 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 N4BP2L1Q5TBK1 243 aaPredicted RBP1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 OR10K2Q6IF99 312 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 TNFAIP8L2Q6P589 184 aaPredicted RBP1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 AKAP14Q86UN6 197 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 COMMD7Q86VX2 200 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 HOPXQ9BPY8 73 aaPredicted RBP1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 SELENOSQ9BQE4 189 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 C16orf95Q9H693 158 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 HES4Q9HCC6 221 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 SMPXQ9UHP9 88 aa1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 PCYT1BQ9Y5K3 369 aaPredicted RBP1.9□□□□□ -2.11
CDC42BPA-211ENST00000466538 HECW2Q9P2P5 1572 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 CACNA1SQ13698 1873 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 TMEM235A6NFC5 223 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 H0YJX3 145 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 LY6LH3BQJ8 138 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 M0R381 172 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 CCR7P32248 378 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 CD200P41217 278 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 SLCO1A2P46721 670 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 SULT1A1P50225 295 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 RAB14P61106 215 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 HLA-DRB3P79483 266 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 RUNX1Q01196 453 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 TMED2Q15363 201 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 HACD4Q5VWC8 232 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 BAP18Q8IXM2 172 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 OR1L8Q8NGR8 309 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 JOSD2Q8TAC2 188 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 NEK7Q8TDX7 302 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 TMA16Q96EY4 203 aaKnown RBP1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 IMP4Q96G21 291 aaKnown RBP1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 DNAJC30Q96LL9 226 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 NIPSNAP1Q9BPW8 284 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 TMEM109Q9BVC6 243 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 MRPL40Q9NQ50 206 aaKnown RBP1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 NCOA1Q15788 1441 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 OTOFQ9HC10 1997 aa1.89□□□□□ -2.11
CDC42BPA-211ENST00000466538 KIF15Q9NS87 1388 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 DSCAML1Q8TD84 2053 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 ADAMTS7Q9UKP4 1686 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 TRGV4A0A0C4DH28 118 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 C19orf71A6NCJ1 209 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 KNCNA6PVL3 124 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 H3BPC8 53 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 KLRC4O43908 158 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 NDUFB2O95178 105 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 IL3P08700 152 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 CCL3P10147 92 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 MYL12AP19105 171 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 HOXC5Q00444 222 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 EMX1Q04741 257 aaPredicted RBP1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 ALX1Q15699 326 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 AMTNQ6UX39 209 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 ZNF550Q7Z398 422 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 GLT6D1Q7Z4J2 308 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 OR4X1Q8NH49 305 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 SLC35B4Q969S0 331 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 ANKRD36BP1Q96IX9 119 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 OR52B2Q96RD2 323 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 PECRQ9BY49 303 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 TMEM106BQ9NUM4 274 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 GLTPQ9NZD2 209 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 VPS29Q9UBQ0 182 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 STOML2Q9UJZ1 356 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 DKKL1Q9UK85 242 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 FBXO5Q9UKT4 447 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 POLR1DQ9Y2S0 133 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 KLK5Q9Y337 293 aaPredicted RBP1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 ARL5AQ9Y689 179 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 ITGB4P16144 1822 aa1.88□□□□□ -2.11
CDC42BPA-211ENST00000466538 OR6C6A6NF89 314 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 OR11H12B2RN74 326 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 PIK3C2GO75747 1445 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 CNIH1O95406 144 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 GZMBP10144 247 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 CD36P16671 472 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 CCL1P22362 96 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 CRYBB3P26998 211 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 FOXF1Q12946 379 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 KRR1Q13601 381 aaKnown RBP1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 WRNQ14191 1432 aaPredicted RBP eCLIP1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 MOGQ16653 247 aa1.87□□□□□ -2.11
CDC42BPA-211ENST00000466538 PLPPR5Q32ZL2 321 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms