RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 TCRBP04435 133 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 CTXN2P0C2S0 81 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 GLP1RP43220 463 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 OR3A1P47881 315 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 CCR6P51684 374 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 TSPAN5P62079 268 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 SCGB2B2Q4G0G5 96 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 TRAT1Q6PIZ9 186 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 GAPTQ8N292 157 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 OR51S1Q8NGJ8 323 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 MRPL30Q8TCC3 161 aaKnown RBP11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 MAFIPQ8WZ33 124 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 SLC25A21Q9BQT8 299 aaPredicted RBP11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 TINAGL1Q9GZM7 467 aaPredicted RBP11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 ALX4Q9H161 411 aaPredicted RBP11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 C20orf85Q9H1P6 137 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 NUDT15Q9NV35 164 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 KCNIP1Q9NZI2 227 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 TRAPPC2LQ9UL33 140 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 TRDCB7Z8K6 153 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 J3QR06 171 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 NDUFB6O95139 128 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 DHFRP00374 187 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 PPIFP30405 207 aaKnown RBP11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 HLA-DRB3P79483 266 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 PMS2P11Q13670 270 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 KRBOX4Q5JUW0 171 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 C6orf183Q5T699 404 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 ZNF880Q6PDB4 577 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 LINC00322Q6ZN03 302 aaPredicted RBP11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 IDO2Q6ZQW0 420 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 OR4D10Q8NGI6 311 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 PLPPR1Q8TBJ4 325 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 SCGB3A2Q96PL1 93 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 RASL11BQ9BPW5 248 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 GINS4Q9BRT9 223 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 MARVELD1Q9BSK0 173 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 KRTAP4-5Q9BYR2 181 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 RAB9BQ9NP90 201 aa11.25□□□□□ -0.61
HMGXB4-206ENST00000466438 INMT-MINDY4F8WBC2 141 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 FABP7O15540 132 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 DIRAS3O95661 229 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 IGLV1-40P01703 118 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 H2AFB2P0C5Z0 115 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 NFYBP25208 207 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 ZNF554Q86TJ5 538 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 GTSCR1Q86UQ5 136 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 OR4A4PQ8NGN8 299 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 OR2T10Q8NGZ9 312 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 RSRP1Q9BUV0 290 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 ELOVL1Q9BW60 279 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 TOLLIPQ9H0E2 274 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 NCOR1P1Q9H4R4 102 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 TPSG1Q9NRR2 321 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 PLSCR3Q9NRY6 295 aa11.24□□□□□ -0.61
HMGXB4-206ENST00000466438 hCG_2014768A0A024R1R8 64 aa11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 IGHV4OR15-8A0A075B7B6 117 aa11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 A0A087WW49 117 aa11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 MEIKINA0A087WXM9 373 aa11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 PRAF2O60831 178 aa11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 ZNF735P0CB33 412 aa11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 GLIPR1P48060 266 aa11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 RAB9AP51151 201 aa11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 LGALS9CQ6DKI2 356 aa11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 CEMP1Q6PRD7 247 aaPredicted RBP11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 OR6F1Q8NGZ6 308 aa11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 KIRREL1Q96J84 757 aa11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 CYYR1Q96J86 154 aa11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 S1PR3Q99500 378 aa11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 MBNL3Q9NUK0 354 aaKnown RBP11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 ING3Q9NXR8 418 aa11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 KIF25Q9UIL4 384 aa11.23□□□□□ -0.61
HMGXB4-206ENST00000466438 TRAV6A0A075B6T7 132 aa11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 IGKV1D-8A0A087WSZ0 117 aa11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 IGHV3-72A0A0B4J1Y9 119 aa11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 ODAMA1E959 279 aa11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 ZNF729A6NN14 1252 aaPredicted RBP11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 ARPC1BO15143 372 aaKnown RBP11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 AESQ08117 197 aa11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 ZNF816Q0VGE8 651 aaPredicted RBP11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 SURF2Q15527 256 aaPredicted RBP11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 HMGN3Q15651 99 aa11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 C17orf58Q2M2W7 97 aa11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 MOB3BQ86TA1 216 aa11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 TERB2Q8NHR7 220 aa11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 CCDC107Q8WV48 283 aa11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 COQ2Q96H96 371 aa11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 CABLES2Q9BTV7 478 aa11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 OR6C3Q9NZP0 311 aa11.22□□□□□ -0.61
HMGXB4-206ENST00000466438 VPS13DQ5THJ4 4388 aa11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 IGHV1-3A0A0C4DH29 117 aa11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 A0A1B0GVG6 124 aa11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 H0Y980 276 aa11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 SDCBPO00560 298 aaPredicted RBP11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 HSD17B6O14756 317 aa11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 IGHV3-7P01780 117 aa11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 RLN1P04808 185 aa11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 LGALS1P09382 135 aaKnown RBP11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 GSTT2P0CG29 244 aa11.21□□□□□ -0.61
HMGXB4-206ENST00000466438 HERV-K104P61576 105 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms