RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 C6orf62Q9GZU0 229 aaPredicted RBP20.21■□□□□ 0.83
SMC4-206ENST00000465903 A0A1W2PN81 502 aa20.2■□□□□ 0.82
SMC4-206ENST00000465903 SAA1P0DJI8 122 aaPredicted RBP20.2■□□□□ 0.82
SMC4-206ENST00000465903 CHRNA7P36544 502 aa20.2■□□□□ 0.82
SMC4-206ENST00000465903 TMEM267Q0VDI3 215 aaPredicted RBP20.2■□□□□ 0.82
SMC4-206ENST00000465903 VAX1Q5SQQ9 334 aa20.2■□□□□ 0.82
SMC4-206ENST00000465903 UNQ5815/PRO19632Q6UWF5 114 aa20.2■□□□□ 0.82
SMC4-206ENST00000465903 TCTEX1D1Q8N7M0 179 aa20.2■□□□□ 0.82
SMC4-206ENST00000465903 OR4S2Q8NH73 311 aa20.2■□□□□ 0.82
SMC4-206ENST00000465903 CCDC160A6NGH7 325 aa20.19■□□□□ 0.82
SMC4-206ENST00000465903 M0QYG6 137 aa20.19■□□□□ 0.82
SMC4-206ENST00000465903 SLC6A1P30531 599 aa20.19■□□□□ 0.82
SMC4-206ENST00000465903 KIR2DS2P43631 304 aa20.19■□□□□ 0.82
SMC4-206ENST00000465903 TSPAN5P62079 268 aa20.19■□□□□ 0.82
SMC4-206ENST00000465903 GNB1P62873 340 aa20.19■□□□□ 0.82
SMC4-206ENST00000465903 PRSS8Q16651 343 aa20.19■□□□□ 0.82
SMC4-206ENST00000465903 FCAMRQ8WWV6 532 aa20.19■□□□□ 0.82
SMC4-206ENST00000465903 FOXA2Q9Y261 457 aaPredicted RBP20.19■□□□□ 0.82
SMC4-206ENST00000465903 NUDT19A8MXV4 375 aa20.18■□□□□ 0.82
SMC4-206ENST00000465903 GABARAPH6UMI1 98 aa20.18■□□□□ 0.82
SMC4-206ENST00000465903 RAMP3O60896 148 aa20.18■□□□□ 0.82
SMC4-206ENST00000465903 CNIH1O95406 144 aa20.18■□□□□ 0.82
SMC4-206ENST00000465903 PF4P02776 101 aa20.18■□□□□ 0.82
SMC4-206ENST00000465903 RAB9AP51151 201 aa20.18■□□□□ 0.82
SMC4-206ENST00000465903 PYHIN1Q6K0P9 492 aa20.18■□□□□ 0.82
SMC4-206ENST00000465903 VKORC1L1Q8N0U8 176 aa20.18■□□□□ 0.82
SMC4-206ENST00000465903 SPAG16Q8N0X2 631 aa20.18■□□□□ 0.82
SMC4-206ENST00000465903 ZNF491Q8N8L2 437 aa20.18■□□□□ 0.82
SMC4-206ENST00000465903 MCFD2Q8NI22 146 aa20.18■□□□□ 0.82
SMC4-206ENST00000465903 GRPEL2Q8TAA5 225 aa20.18■□□□□ 0.82
SMC4-206ENST00000465903 SOSTQ9BQB4 213 aa20.18■□□□□ 0.82
SMC4-206ENST00000465903 TINAGL1Q9GZM7 467 aaPredicted RBP20.18■□□□□ 0.82
SMC4-206ENST00000465903 RSL24D1Q9UHA3 163 aaKnown RBP20.18■□□□□ 0.82
SMC4-206ENST00000465903 MEGF8Q7Z7M0 2845 aa20.18■□□□□ 0.82
SMC4-206ENST00000465903 RBFOX2O43251 390 aaKnown RBP eCLIP20.17■□□□□ 0.82
SMC4-206ENST00000465903 PGLYRP1O75594 196 aaPredicted RBP20.17■□□□□ 0.82
SMC4-206ENST00000465903 CD3DP04234 171 aa20.17■□□□□ 0.82
SMC4-206ENST00000465903 TNFSF8P32971 234 aa20.17■□□□□ 0.82
SMC4-206ENST00000465903 CATR1Q13166 79 aa20.17■□□□□ 0.82
SMC4-206ENST00000465903 ACTBL2Q562R1 376 aa20.17■□□□□ 0.82
SMC4-206ENST00000465903 ASPHD1Q5U4P2 390 aa20.17■□□□□ 0.82
SMC4-206ENST00000465903 C1QL4Q86Z23 238 aa20.17■□□□□ 0.82
SMC4-206ENST00000465903 PUSL1Q8N0Z8 303 aaKnown RBP20.17■□□□□ 0.82
SMC4-206ENST00000465903 CASTOR1Q8WTX7 329 aa20.17■□□□□ 0.82
SMC4-206ENST00000465903 BORCS5Q969J3 196 aa20.17■□□□□ 0.82
SMC4-206ENST00000465903 P2RX4Q99571 388 aa20.17■□□□□ 0.82
SMC4-206ENST00000465903 ZNF430Q9H8G1 570 aaPredicted RBP20.17■□□□□ 0.82
SMC4-206ENST00000465903 G3V4G9 280 aa20.16■□□□□ 0.82
SMC4-206ENST00000465903 CTDSPLO15194 276 aa20.16■□□□□ 0.82
SMC4-206ENST00000465903 MYCNOSP40205 109 aa20.16■□□□□ 0.82
SMC4-206ENST00000465903 MRPS10P82664 201 aaKnown RBP20.16■□□□□ 0.82
SMC4-206ENST00000465903 SAMD5Q5TGI4 173 aa20.16■□□□□ 0.82
SMC4-206ENST00000465903 AADACL3Q5VUY0 350 aa20.16■□□□□ 0.82
SMC4-206ENST00000465903 TMEM65Q6PI78 240 aa20.16■□□□□ 0.82
SMC4-206ENST00000465903 LINC00482Q8N8I6 264 aa20.16■□□□□ 0.82
SMC4-206ENST00000465903 TMEM229BQ8NBD8 167 aa20.16■□□□□ 0.82
SMC4-206ENST00000465903 OR5M8Q8NGP6 311 aa20.16■□□□□ 0.82
SMC4-206ENST00000465903 OR51H1Q8NH63 302 aa20.16■□□□□ 0.82
SMC4-206ENST00000465903 RAX2Q96IS3 184 aa20.16■□□□□ 0.82
SMC4-206ENST00000465903 UBE2E2Q96LR5 201 aa20.16■□□□□ 0.82
SMC4-206ENST00000465903 DUX3Q96PT4 197 aa20.16■□□□□ 0.82
SMC4-206ENST00000465903 GNB4Q9HAV0 340 aa20.16■□□□□ 0.82
SMC4-206ENST00000465903 RABL2AQ9UBK7 228 aaPredicted RBP20.16■□□□□ 0.82
SMC4-206ENST00000465903 RABL2BQ9UNT1 228 aa20.16■□□□□ 0.82
SMC4-206ENST00000465903 ZNF701M0R085 212 aaPredicted RBP20.15■□□□□ 0.82
SMC4-206ENST00000465903 GPR31O00270 319 aa20.15■□□□□ 0.82
SMC4-206ENST00000465903 CD74P04233 296 aa20.15■□□□□ 0.82
SMC4-206ENST00000465903 IL18Q14116 193 aa20.15■□□□□ 0.82
SMC4-206ENST00000465903 TNXAQ16473 311 aa20.15■□□□□ 0.82
SMC4-206ENST00000465903 MRPL41Q8IXM3 137 aaKnown RBP20.15■□□□□ 0.82
SMC4-206ENST00000465903 SMIM4Q8WVI0 70 aa20.15■□□□□ 0.82
SMC4-206ENST00000465903 RSRP1Q9BUV0 290 aa20.15■□□□□ 0.82
SMC4-206ENST00000465903 OR2A4O95047 310 aa20.14■□□□□ 0.81
SMC4-206ENST00000465903 HRASP01112 189 aa20.14■□□□□ 0.81
SMC4-206ENST00000465903 CD33P20138 364 aa20.14■□□□□ 0.81
SMC4-206ENST00000465903 UCP3P55916 312 aa20.14■□□□□ 0.81
SMC4-206ENST00000465903 SSBP1Q04837 148 aaKnown RBP20.14■□□□□ 0.81
SMC4-206ENST00000465903 DEFB136Q30KP8 78 aa20.14■□□□□ 0.81
SMC4-206ENST00000465903 RNASE10Q5GAN6 216 aaKnown RBP20.14■□□□□ 0.81
SMC4-206ENST00000465903 LHFPL1Q86WI0 220 aa20.14■□□□□ 0.81
SMC4-206ENST00000465903 MMD2Q8IY49 270 aa20.14■□□□□ 0.81
SMC4-206ENST00000465903 OR4D10Q8NGI6 311 aa20.14■□□□□ 0.81
SMC4-206ENST00000465903 TMEM167AQ8TBQ9 72 aa20.14■□□□□ 0.81
SMC4-206ENST00000465903 C4orf3Q8WVX3 66 aa20.14■□□□□ 0.81
SMC4-206ENST00000465903 RHOVQ96L33 236 aa20.14■□□□□ 0.81
SMC4-206ENST00000465903 OR2A7Q96R45 310 aa20.14■□□□□ 0.81
SMC4-206ENST00000465903 HPRT1P00492 218 aa20.13■□□□□ 0.81
SMC4-206ENST00000465903 RLN1P04808 185 aa20.13■□□□□ 0.81
SMC4-206ENST00000465903 OXLD1Q5BKU9 147 aa20.13■□□□□ 0.81
SMC4-206ENST00000465903 SSX9Q7RTT3 188 aa20.13■□□□□ 0.81
SMC4-206ENST00000465903 OR5T1Q8NG75 326 aa20.13■□□□□ 0.81
SMC4-206ENST00000465903 SRSF12Q8WXF0 261 aaKnown RBP20.13■□□□□ 0.81
SMC4-206ENST00000465903 TMEM68Q96MH6 324 aa20.13■□□□□ 0.81
SMC4-206ENST00000465903 VSIG4Q9Y279 399 aa20.13■□□□□ 0.81
SMC4-206ENST00000465903 MSGN1A6NI15 193 aa20.12■□□□□ 0.81
SMC4-206ENST00000465903 I3L521 148 aa20.12■□□□□ 0.81
SMC4-206ENST00000465903 CCL24O00175 119 aa20.12■□□□□ 0.81
SMC4-206ENST00000465903 KBTBD11O94819 623 aa20.12■□□□□ 0.81
SMC4-206ENST00000465903 TAS2R19P59542 299 aa20.12■□□□□ 0.81
SMC4-206ENST00000465903 DEFA6Q01524 100 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms