RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 ZNF860A6NHJ4 632 aa1.18□□□□□ -2.22
SMC4-205ENST00000465563 ZNF705FA8MVS1 300 aaPredicted RBP1.18□□□□□ -2.22
SMC4-205ENST00000465563 TYMSP04818 313 aa1.18□□□□□ -2.22
SMC4-205ENST00000465563 REG1AP05451 166 aa1.18□□□□□ -2.22
SMC4-205ENST00000465563 HLA-DQB2P05538 268 aa1.18□□□□□ -2.22
SMC4-205ENST00000465563 IL3P08700 152 aa1.18□□□□□ -2.22
SMC4-205ENST00000465563 PEBP1P30086 187 aaKnown RBP1.18□□□□□ -2.22
SMC4-205ENST00000465563 RPL27AP46776 148 aaKnown RBP1.18□□□□□ -2.22
SMC4-205ENST00000465563 CDK9P50750 372 aaKnown RBP1.18□□□□□ -2.22
SMC4-205ENST00000465563 PRDX4Q13162 271 aa1.18□□□□□ -2.22
SMC4-205ENST00000465563 PABPC1L2AQ5JQF8 200 aa1.18□□□□□ -2.22
SMC4-205ENST00000465563 OTUD6BQ8N6M0 293 aa1.18□□□□□ -2.22
SMC4-205ENST00000465563 JOSD2Q8TAC2 188 aa1.18□□□□□ -2.22
SMC4-205ENST00000465563 GNPNAT1Q96EK6 184 aaPredicted RBP1.18□□□□□ -2.22
SMC4-205ENST00000465563 MRPS24Q96EL2 167 aaKnown RBP1.18□□□□□ -2.22
SMC4-205ENST00000465563 MAP1LC3AQ9H492 121 aa1.18□□□□□ -2.22
SMC4-205ENST00000465563 COQ4Q9Y3A0 265 aa1.18□□□□□ -2.22
SMC4-205ENST00000465563 BRWD1Q9NSI6 2320 aa1.18□□□□□ -2.22
SMC4-205ENST00000465563 MYOFQ9NZM1 2061 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 RP1P56715 2156 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 DISP1Q96F81 1524 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 TMSB15BA0A087X1C1 80 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 CXCR6O00574 342 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 UCHL1P09936 223 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 CDC34P49427 236 aaPredicted RBP1.17□□□□□ -2.22
SMC4-205ENST00000465563 IDH3GP51553 393 aaPredicted RBP1.17□□□□□ -2.22
SMC4-205ENST00000465563 TNFAIP6P98066 277 aaPredicted RBP1.17□□□□□ -2.22
SMC4-205ENST00000465563 OR10K2Q6IF99 312 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 UBL4BQ8N7F7 174 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 OR4X2Q8NGF9 303 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 SGMS2Q8NHU3 365 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 ZNF675Q8TD23 568 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 NMNAT3Q96T66 252 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 HRASLSQ9HDD0 168 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 BABAM2Q9NXR7 383 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 DKKL1Q9UK85 242 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 HHLA3Q9XRX5 114 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 RBM7Q9Y580 266 aaKnown RBP1.17□□□□□ -2.22
SMC4-205ENST00000465563 MAP3K5Q99683 1374 aa1.17□□□□□ -2.22
SMC4-205ENST00000465563 TRAV41A0A0B4J266 112 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 C21orf140B9A014 251 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 COX7A2LO14548 114 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 PFDN6O15212 129 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 SSNA1O43805 119 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 BPGMP07738 259 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 CCL5P13501 91 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 RPL12P30050 165 aaKnown RBP1.16□□□□□ -2.22
SMC4-205ENST00000465563 ALDH3A1P30838 453 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 MIAQ16674 131 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 LRRC75BQ2VPJ9 315 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 HSP90B2PQ58FF3 399 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 FAM78BQ5VT40 261 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 UMODL1-AS1Q8N2C9 162 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 OR5J2Q8NH18 312 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 LHFPL5Q8TAF8 219 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 RAB2BQ8WUD1 216 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 ANAPC10Q9UM13 185 aa1.16□□□□□ -2.22
SMC4-205ENST00000465563 COL6A6A6NMZ7 2263 aa1.15□□□□□ -2.22
SMC4-205ENST00000465563 MICAL3Q7RTP6 2002 aa1.15□□□□□ -2.22
SMC4-205ENST00000465563 IGHV3-64A0A075B6Q5 118 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 A0A1B0GVG6 124 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 A0A1B0GW54 56 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 H0Y980 276 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 J3QQQ9 107 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 TPM3P06753 285 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 MAGEA2P43356 314 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 REG1BP48304 166 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 HINT1P49773 126 aaPredicted RBP1.15□□□□□ -2.23
SMC4-205ENST00000465563 BLVRAP53004 296 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 RPL26P61254 145 aaKnown RBP1.15□□□□□ -2.23
SMC4-205ENST00000465563 GNA12Q03113 381 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 TNFAIP8L3Q5GJ75 292 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 LRRN1Q6UXK5 716 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 RASSF6Q6ZTQ3 369 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 ZNF550Q7Z398 422 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 GPR32P1Q8NGA4 272 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 OR1L8Q8NGR8 309 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 OR2T27Q8NH04 317 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 PIGXQ8TBF5 258 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 ASB17Q8WXJ9 295 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 VCX3BQ9H321 246 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 TAAR3PQ9P1P4 343 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 RPL26L1Q9UNX3 145 aaKnown RBP1.15□□□□□ -2.23
SMC4-205ENST00000465563 GRIN2BQ13224 1484 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 CCDC88AQ3V6T2 1871 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 RGS12O14924 1447 aa1.15□□□□□ -2.23
SMC4-205ENST00000465563 RFPL4AA6NLU0 287 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 A8MUN3 132 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 RFPL4AL1F8VTS6 287 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 M0QZ92 97 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 LST1O00453 97 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 DEXIO95424 95 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 C1QCP02747 245 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 OCM2P0CE71 109 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 RAP1GDS1P52306 607 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 FXYD7P58549 80 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 TAS2R20P59543 309 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 TPM4P67936 248 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 COTL1Q14019 142 aa1.14□□□□□ -2.23
SMC4-205ENST00000465563 CDKL4Q5MAI5 379 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms