RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 EWSR1Q01844 656 aaKnown RBP eCLIP7.67□□□□□ -1.18
TMEM54-203ENST00000463914 SPHARQ15513 63 aa7.67□□□□□ -1.18
TMEM54-203ENST00000463914 OR2B11Q5JQS5 317 aa7.67□□□□□ -1.18
TMEM54-203ENST00000463914 LIPKQ5VXJ0 399 aa7.67□□□□□ -1.18
TMEM54-203ENST00000463914 TMEM91Q6ZNR0 172 aa7.67□□□□□ -1.18
TMEM54-203ENST00000463914 NECAP1Q8NC96 275 aa7.67□□□□□ -1.18
TMEM54-203ENST00000463914 OR56B1Q8NGI3 324 aa7.67□□□□□ -1.18
TMEM54-203ENST00000463914 OR10J5Q8NHC4 309 aa7.67□□□□□ -1.18
TMEM54-203ENST00000463914 CCDC140Q96MF4 163 aa7.67□□□□□ -1.18
TMEM54-203ENST00000463914 OVOL2Q9BRP0 275 aa7.67□□□□□ -1.18
TMEM54-203ENST00000463914 RBM7Q9Y580 266 aaKnown RBP7.67□□□□□ -1.18
TMEM54-203ENST00000463914 IGKV1D-8A0A087WSZ0 117 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 TMEM272A0A1B0GTI8 110 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 TMEM213A2RRL7 107 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 MFNGO00587 321 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 ACTL6BO94805 426 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 SCAF4O95104 1147 aaKnown RBP7.66□□□□□ -1.18
TMEM54-203ENST00000463914 ATP6V1G2O95670 118 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 CDK10Q15131 360 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 MED22Q15528 200 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 HES5Q5TA89 166 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 SLC16A13Q7RTY0 426 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 OSR1Q8TAX0 266 aaPredicted RBP7.66□□□□□ -1.18
TMEM54-203ENST00000463914 UFD1Q92890 307 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 FAM3DQ96BQ1 224 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 KCTD12Q96CX2 325 aaKnown RBP7.66□□□□□ -1.18
TMEM54-203ENST00000463914 RAB3CQ96E17 227 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 ADTRPQ96IZ2 230 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 SPIN2AQ99865 258 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 SPIN2BQ9BPZ2 258 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 GINS4Q9BRT9 223 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 ST6GALNAC5Q9BVH7 336 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 GGTLC1Q9BX51 225 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 VCX3BQ9H321 246 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 MLXQ9UH92 298 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 FBXL7Q9UJT9 491 aa7.66□□□□□ -1.18
TMEM54-203ENST00000463914 A0A075B6Q4 140 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 A0A0J9YWU9 116 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 A0A1B0GW64 132 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 TEX22C9J3V5 150 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 J3QRK9 145 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 DENRO43583 198 aaKnown RBP7.65□□□□□ -1.18
TMEM54-203ENST00000463914 FCGR3BO75015 233 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 GGCTO75223 188 aaKnown RBP7.65□□□□□ -1.18
TMEM54-203ENST00000463914 NDUFB8O95169 186 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 AREGP15514 252 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 GNB3P16520 340 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 CBLN1P23435 193 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 MRPS15P82914 257 aaKnown RBP7.65□□□□□ -1.18
TMEM54-203ENST00000463914 C2orf76Q3KRA6 126 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 ZNF57Q68EA5 555 aaPredicted RBP7.65□□□□□ -1.18
TMEM54-203ENST00000463914 BTNL8Q6UX41 500 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 MMD2Q8IY49 270 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 H1FOOQ8IZA3 346 aaPredicted RBP7.65□□□□□ -1.18
TMEM54-203ENST00000463914 VKORC1L1Q8N0U8 176 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 TTC9CQ8N5M4 171 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 OR52B4Q8NGK2 314 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 TECRQ9NZ01 308 aaKnown RBP7.65□□□□□ -1.18
TMEM54-203ENST00000463914 ZNF257Q9Y2Q1 563 aa7.65□□□□□ -1.18
TMEM54-203ENST00000463914 LOC102724200A0A096LPH7 203 aaPredicted RBP7.64□□□□□ -1.19
TMEM54-203ENST00000463914 ZNF320A2RRD8 509 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 NUPR2A6NF83 97 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 E7EUB6 86 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 PTGES3LE9PB15 166 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 LGALS9O00182 355 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 CREBL2O60519 120 aaPredicted RBP7.64□□□□□ -1.19
TMEM54-203ENST00000463914 DIRAS3O95661 229 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 HSMCR30P0CW71 290 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 CALRP27797 417 aaKnown RBP7.64□□□□□ -1.19
TMEM54-203ENST00000463914 ARL3P36405 182 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 RPL30P62888 115 aaKnown RBP7.64□□□□□ -1.19
TMEM54-203ENST00000463914 TPBGQ13641 420 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 IRF3Q14653 427 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 CLEC19AQ6UXS0 136 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 IZUMO2Q6UXV1 221 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 KCTD9Q7L273 389 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 RPP25LQ8N5L8 163 aaKnown RBP7.64□□□□□ -1.19
TMEM54-203ENST00000463914 UXS1Q8NBZ7 420 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 FANCD2OSQ96PS1 177 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 DCUN1D5Q9BTE7 237 aa7.64□□□□□ -1.19
TMEM54-203ENST00000463914 A8MWP6 167 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 RAB27BO00194 218 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 ARL6IP5O75915 188 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 KBTBD11O94819 623 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 IL6RP08887 468 aaPredicted RBP7.63□□□□□ -1.19
TMEM54-203ENST00000463914 MYOD1P15172 320 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 HIST1H1DP16402 221 aaKnown RBP7.63□□□□□ -1.19
TMEM54-203ENST00000463914 RPL27AP46776 148 aaKnown RBP7.63□□□□□ -1.19
TMEM54-203ENST00000463914 HSPA13P48723 471 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 OR10A3P58181 314 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 FABP5Q01469 135 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 DEFB135Q30KP9 77 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 TM4SF20Q53R12 229 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 FAM209BQ5JX69 171 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 UNQ9165/PRO28630Q6UXU0 137 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 LYG2Q86SG7 212 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 SLC25A42Q86VD7 318 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 GPHB5Q86YW7 130 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 OR10R2Q8NGX6 335 aa7.63□□□□□ -1.19
TMEM54-203ENST00000463914 FYTTD1Q96QD9 318 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms