RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 TNXAQ16473 311 aa12.59□□□□□ -0.39
COL1A1-202ENST00000463440 C9orf66Q5T8R8 295 aa12.59□□□□□ -0.39
COL1A1-202ENST00000463440 IDO2Q6ZQW0 420 aa12.59□□□□□ -0.39
COL1A1-202ENST00000463440 POC5Q8NA72 575 aa12.59□□□□□ -0.39
COL1A1-202ENST00000463440 OR5T1Q8NG75 326 aa12.59□□□□□ -0.39
COL1A1-202ENST00000463440 GIMAP1Q8WWP7 306 aa12.59□□□□□ -0.39
COL1A1-202ENST00000463440 PHB2Q99623 299 aa12.59□□□□□ -0.39
COL1A1-202ENST00000463440 SLC5A7Q9GZV3 580 aa12.59□□□□□ -0.39
COL1A1-202ENST00000463440 CCL28Q9NRJ3 127 aa12.59□□□□□ -0.39
COL1A1-202ENST00000463440 PRKDCP78527 4128 aaKnown RBP12.58□□□□□ -0.4
COL1A1-202ENST00000463440 SEC14L6B5MCN3 397 aa12.58□□□□□ -0.4
COL1A1-202ENST00000463440 ACTL6BO94805 426 aa12.58□□□□□ -0.4
COL1A1-202ENST00000463440 SAA1P0DJI8 122 aaPredicted RBP12.58□□□□□ -0.4
COL1A1-202ENST00000463440 KIR2DS2P43631 304 aa12.58□□□□□ -0.4
COL1A1-202ENST00000463440 TAS2R46P59540 309 aa12.58□□□□□ -0.4
COL1A1-202ENST00000463440 FXYD4P59646 89 aa12.58□□□□□ -0.4
COL1A1-202ENST00000463440 HERV-K104P61576 105 aa12.58□□□□□ -0.4
COL1A1-202ENST00000463440 MRGPRG-AS1Q2M3A8 158 aa12.58□□□□□ -0.4
COL1A1-202ENST00000463440 GPR107Q5VW38 600 aa12.58□□□□□ -0.4
COL1A1-202ENST00000463440 MZT2AQ6P582 158 aa12.58□□□□□ -0.4
COL1A1-202ENST00000463440 MMD2Q8IY49 270 aa12.58□□□□□ -0.4
COL1A1-202ENST00000463440 AP3S1Q92572 193 aa12.58□□□□□ -0.4
COL1A1-202ENST00000463440 NAA50Q9GZZ1 169 aaKnown RBP12.58□□□□□ -0.4
COL1A1-202ENST00000463440 ALX4Q9H161 411 aaPredicted RBP12.58□□□□□ -0.4
COL1A1-202ENST00000463440 EHFQ9NZC4 300 aa12.58□□□□□ -0.4
COL1A1-202ENST00000463440 ANAPC10Q9UM13 185 aa12.58□□□□□ -0.4
COL1A1-202ENST00000463440 MSGN1A6NI15 193 aa12.57□□□□□ -0.4
COL1A1-202ENST00000463440 LINC01619G3V211 115 aa12.57□□□□□ -0.4
COL1A1-202ENST00000463440 IGHV3-11P01762 117 aa12.57□□□□□ -0.4
COL1A1-202ENST00000463440 DGCR2P98153 550 aa12.57□□□□□ -0.4
COL1A1-202ENST00000463440 CTF1Q16619 201 aa12.57□□□□□ -0.4
COL1A1-202ENST00000463440 ASPHD1Q5U4P2 390 aa12.57□□□□□ -0.4
COL1A1-202ENST00000463440 GPR141Q7Z602 305 aa12.57□□□□□ -0.4
COL1A1-202ENST00000463440 OR5H2Q8NGV7 314 aa12.57□□□□□ -0.4
COL1A1-202ENST00000463440 VSTM2AQ8TAG5 236 aa12.57□□□□□ -0.4
COL1A1-202ENST00000463440 SRSF12Q8WXF0 261 aaKnown RBP12.57□□□□□ -0.4
COL1A1-202ENST00000463440 BORCS5Q969J3 196 aa12.57□□□□□ -0.4
COL1A1-202ENST00000463440 RHOVQ96L33 236 aa12.57□□□□□ -0.4
COL1A1-202ENST00000463440 ZNF430Q9H8G1 570 aaPredicted RBP12.57□□□□□ -0.4
COL1A1-202ENST00000463440 A0A0G2JLM5 398 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 C13orf42A0A1B0GVH6 325 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 K7EIL1 84 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 MPPED1O15442 326 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 TNFSF12O43508 249 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 HPGDSO60760 199 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 RAMP3O60896 148 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 OR2A4O95047 310 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 HRASP01112 189 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 NAT1P18440 290 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 CATR1Q13166 79 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 DYRK1AQ13627 763 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 DHRS11Q6UWP2 260 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 TMEM17Q86X19 198 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 OR2A7Q96R45 310 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 GPHA2Q96T91 129 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 SPIN2AQ99865 258 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 SPIN2BQ9BPZ2 258 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 AIFM2Q9BRQ8 373 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 SCPEP1Q9HB40 452 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 COA4Q9NYJ1 87 aa12.56□□□□□ -0.4
COL1A1-202ENST00000463440 IGHV4OR15-8A0A075B7B6 117 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 A0A087WW49 117 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 WI2-2373I1.2A0A1W2PRP0 233 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 FAM25AB3EWG3 89 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 FAM25CB3EWG5 89 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 FAM25GB3EWG6 89 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 OVOL1O14753 267 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 BRI3O95415 125 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 PMP2P02689 132 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 HSPB1P04792 205 aaKnown RBP12.55□□□□□ -0.4
COL1A1-202ENST00000463440 ZNF182P17025 639 aaPredicted RBP12.55□□□□□ -0.4
COL1A1-202ENST00000463440 ELK1P19419 428 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 RFX2P48378 723 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 ALDH3B2P48448 385 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 INSL3P51460 131 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 DEFB121Q5J5C9 76 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 VKORC1L1Q8N0U8 176 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 GPX8Q8TED1 209 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 DCUN1D4Q92564 292 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 ZNF2Q9BSG1 426 aaPredicted RBP12.55□□□□□ -0.4
COL1A1-202ENST00000463440 TINAGL1Q9GZM7 467 aaPredicted RBP12.55□□□□□ -0.4
COL1A1-202ENST00000463440 TNCP24821 2201 aa12.55□□□□□ -0.4
COL1A1-202ENST00000463440 RBFOX2O43251 390 aaKnown RBP eCLIP12.54□□□□□ -0.4
COL1A1-202ENST00000463440 KBTBD11O94819 623 aa12.54□□□□□ -0.4
COL1A1-202ENST00000463440 OR9G9P0C7N8 305 aa12.54□□□□□ -0.4
COL1A1-202ENST00000463440 APELAP0DMC3 54 aa12.54□□□□□ -0.4
COL1A1-202ENST00000463440 SLURP1P55000 103 aa12.54□□□□□ -0.4
COL1A1-202ENST00000463440 BRWD1-AS2P59051 145 aa12.54□□□□□ -0.4
COL1A1-202ENST00000463440 ZNF818PQ6ZRF7 136 aa12.54□□□□□ -0.4
COL1A1-202ENST00000463440 SNX29P2Q8IUI4 249 aa12.54□□□□□ -0.4
COL1A1-202ENST00000463440 SPAG16Q8N0X2 631 aa12.54□□□□□ -0.4
COL1A1-202ENST00000463440 PUSL1Q8N0Z8 303 aaKnown RBP12.54□□□□□ -0.4
COL1A1-202ENST00000463440 TMEM167AQ8TBQ9 72 aa12.54□□□□□ -0.4
COL1A1-202ENST00000463440 DLX4Q92988 240 aaPredicted RBP12.54□□□□□ -0.4
COL1A1-202ENST00000463440 MOB3AQ96BX8 217 aa12.54□□□□□ -0.4
COL1A1-202ENST00000463440 SULT1C2O00338 296 aa12.53□□□□□ -0.4
COL1A1-202ENST00000463440 HLA-DMAP28067 261 aa12.53□□□□□ -0.4
COL1A1-202ENST00000463440 GNRHRP30968 328 aa12.53□□□□□ -0.4
COL1A1-202ENST00000463440 HRH1P35367 487 aa12.53□□□□□ -0.4
COL1A1-202ENST00000463440 MAS1LP35410 378 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms