RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 BLOC1S6Q9UL45 172 aa11.69□□□□□ -0.54
SKA3-204ENST00000462482 J3QRK9 145 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 RAB27BO00194 218 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 BMPR1BO00238 502 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 FCGR3BO75015 233 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 SAA1P0DJI8 122 aaPredicted RBP11.68□□□□□ -0.54
SKA3-204ENST00000462482 RAB3BP20337 219 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 DTYMKP23919 212 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 MAP2K4P45985 399 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 AQP4P55087 323 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 GUCA2BQ16661 112 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 ADAMTSL5Q6ZMM2 481 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 Q6ZS49 121 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 KCTD9Q7L273 389 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 ZNF367Q7RTV3 350 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 ZNF645Q8N7E2 425 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 VSTM2AQ8TAG5 236 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 DDB2Q92466 427 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 C5orf30Q96GV9 206 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 THAP7Q9BT49 309 aaPredicted RBP11.68□□□□□ -0.54
SKA3-204ENST00000462482 ATG5Q9H1Y0 275 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 VCX3BQ9H321 246 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 TENM2Q9NT68 2774 aa11.68□□□□□ -0.54
SKA3-204ENST00000462482 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.67□□□□□ -0.54
SKA3-204ENST00000462482 IZUMO1RA6ND01 250 aa11.67□□□□□ -0.54
SKA3-204ENST00000462482 LINC00473A8K010 186 aa11.67□□□□□ -0.54
SKA3-204ENST00000462482 DHFRP00374 187 aa11.67□□□□□ -0.54
SKA3-204ENST00000462482 PRH1P02810 166 aa11.67□□□□□ -0.54
SKA3-204ENST00000462482 CRHBPP24387 322 aa11.67□□□□□ -0.54
SKA3-204ENST00000462482 OR10A3P58181 314 aa11.67□□□□□ -0.54
SKA3-204ENST00000462482 SSX1Q16384 188 aa11.67□□□□□ -0.54
SKA3-204ENST00000462482 CD300EQ496F6 205 aaPredicted RBP11.67□□□□□ -0.54
SKA3-204ENST00000462482 TTC9CQ8N5M4 171 aa11.67□□□□□ -0.54
SKA3-204ENST00000462482 ST6GALNAC5Q9BVH7 336 aa11.67□□□□□ -0.54
SKA3-204ENST00000462482 TRBV9A0A0B4J1U6 114 aa11.66□□□□□ -0.54
SKA3-204ENST00000462482 GGCTO75223 188 aaKnown RBP11.66□□□□□ -0.54
SKA3-204ENST00000462482 OR2J3O76001 311 aa11.66□□□□□ -0.54
SKA3-204ENST00000462482 MECP2P51608 486 aaKnown RBP11.66□□□□□ -0.54
SKA3-204ENST00000462482 TBCEQ15813 527 aaPredicted RBP11.66□□□□□ -0.54
SKA3-204ENST00000462482 MRGPRG-AS1Q2M3A8 158 aa11.66□□□□□ -0.54
SKA3-204ENST00000462482 C15orf32Q32M92 178 aa11.66□□□□□ -0.54
SKA3-204ENST00000462482 CDNFQ49AH0 187 aa11.66□□□□□ -0.54
SKA3-204ENST00000462482 SLC16A13Q7RTY0 426 aa11.66□□□□□ -0.54
SKA3-204ENST00000462482 OR4S2Q8NH73 311 aa11.66□□□□□ -0.54
SKA3-204ENST00000462482 OR51E2Q9H255 320 aa11.66□□□□□ -0.54
SKA3-204ENST00000462482 TECRQ9NZ01 308 aaKnown RBP11.66□□□□□ -0.54
SKA3-204ENST00000462482 ZNF257Q9Y2Q1 563 aa11.66□□□□□ -0.54
SKA3-204ENST00000462482 OR2W1Q9Y3N9 320 aa11.66□□□□□ -0.54
SKA3-204ENST00000462482 DYNC2H1Q8NCM8 4307 aaKnown RBP11.66□□□□□ -0.54
SKA3-204ENST00000462482 OR11H12B2RN74 326 aa11.65□□□□□ -0.54
SKA3-204ENST00000462482 RBMXL2O75526 392 aaKnown RBP11.65□□□□□ -0.54
SKA3-204ENST00000462482 SCGNO76038 276 aa11.65□□□□□ -0.54
SKA3-204ENST00000462482 ZNF45Q02386 682 aa11.65□□□□□ -0.54
SKA3-204ENST00000462482 DEFB114Q30KQ6 69 aa11.65□□□□□ -0.54
SKA3-204ENST00000462482 OR2B11Q5JQS5 317 aa11.65□□□□□ -0.54
SKA3-204ENST00000462482 C10orf55Q5SWW7 151 aa11.65□□□□□ -0.54
SKA3-204ENST00000462482 TCTEX1D2Q8WW35 142 aa11.65□□□□□ -0.54
SKA3-204ENST00000462482 DCSTAMPQ9H295 470 aa11.65□□□□□ -0.54
SKA3-204ENST00000462482 HIPK2Q9H2X6 1198 aa11.65□□□□□ -0.54
SKA3-204ENST00000462482 NKX1-2Q9UD57 310 aaPredicted RBP11.65□□□□□ -0.54
SKA3-204ENST00000462482 FBXL7Q9UJT9 491 aa11.65□□□□□ -0.54
SKA3-204ENST00000462482 RBMX2Q9Y388 322 aaKnown RBP11.65□□□□□ -0.54
SKA3-204ENST00000462482 TRDV1A0A1B0GX56 115 aa11.64□□□□□ -0.55
SKA3-204ENST00000462482 FOLR2P14207 255 aa11.64□□□□□ -0.55
SKA3-204ENST00000462482 NFYAP23511 347 aaPredicted RBP11.64□□□□□ -0.55
SKA3-204ENST00000462482 MAS1LP35410 378 aa11.64□□□□□ -0.55
SKA3-204ENST00000462482 KIR2DS2P43631 304 aa11.64□□□□□ -0.55
SKA3-204ENST00000462482 RPL27AP46776 148 aaKnown RBP11.64□□□□□ -0.55
SKA3-204ENST00000462482 HSPA13P48723 471 aa11.64□□□□□ -0.55
SKA3-204ENST00000462482 GNG2P59768 71 aa11.64□□□□□ -0.55
SKA3-204ENST00000462482 FAM106AQ4KMX7 169 aa11.64□□□□□ -0.55
SKA3-204ENST00000462482 CNIH2Q6PI25 160 aa11.64□□□□□ -0.55
SKA3-204ENST00000462482 DEFB125Q8N687 156 aa11.64□□□□□ -0.55
SKA3-204ENST00000462482 FYTTD1Q96QD9 318 aaKnown RBP11.64□□□□□ -0.55
SKA3-204ENST00000462482 OR2A7Q96R45 310 aa11.64□□□□□ -0.55
SKA3-204ENST00000462482 HSD17B10Q99714 261 aaKnown RBP11.64□□□□□ -0.55
SKA3-204ENST00000462482 FAM110AQ9BQ89 295 aa11.64□□□□□ -0.55
SKA3-204ENST00000462482 SRD5A3Q9H8P0 318 aa11.64□□□□□ -0.55
SKA3-204ENST00000462482 RETNQ9HD89 108 aa11.64□□□□□ -0.55
SKA3-204ENST00000462482 NDUFB11Q9NX14 153 aa11.64□□□□□ -0.55
SKA3-204ENST00000462482 IGKV1D-8A0A087WSZ0 117 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 HMX3A6NHT5 357 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 C2orf70A6NJV1 201 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 ZNF785A8K8V0 405 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 NPIPB5A8MRT5 1133 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 ANKRD65E5RJM6 399 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 PPP5D1E7EU14 171 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 LGALS9O00182 355 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 OR2C1O95371 312 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 HRASP01112 189 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 HLA-DQB1P01920 261 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 CD7P09564 240 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 GALP22466 123 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 ARL3P36405 182 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 HACD4Q5VWC8 232 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 C22orf42Q6IC83 251 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 AIFM2Q9BRQ8 373 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 SPATA2Q9UM82 520 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 RYR2Q92736 4967 aa11.63□□□□□ -0.55
SKA3-204ENST00000462482 ZNF320A2RRD8 509 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms