RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 FAM223AQ8IWN6 122 aa12.19□□□□□ -0.46
COL7A1-204ENST00000462475 OSR1Q8TAX0 266 aaPredicted RBP12.19□□□□□ -0.46
COL7A1-204ENST00000462475 FAM110AQ9BQ89 295 aa12.19□□□□□ -0.46
COL7A1-204ENST00000462475 PEMTQ9UBM1 199 aa12.19□□□□□ -0.46
COL7A1-204ENST00000462475 ELF5Q9UKW6 265 aaPredicted RBP12.19□□□□□ -0.46
COL7A1-204ENST00000462475 ALMS1Q8TCU4 4167 aa12.19□□□□□ -0.46
COL7A1-204ENST00000462475 TRBV9A0A0B4J1U6 114 aa12.18□□□□□ -0.46
COL7A1-204ENST00000462475 J3QRK9 145 aa12.18□□□□□ -0.46
COL7A1-204ENST00000462475 RAB6AP20340 208 aa12.18□□□□□ -0.46
COL7A1-204ENST00000462475 EDN2P20800 178 aa12.18□□□□□ -0.46
COL7A1-204ENST00000462475 CD81P60033 236 aa12.18□□□□□ -0.46
COL7A1-204ENST00000462475 CDK10Q15131 360 aa12.18□□□□□ -0.46
COL7A1-204ENST00000462475 CD300EQ496F6 205 aaPredicted RBP12.18□□□□□ -0.46
COL7A1-204ENST00000462475 LINC00322Q6ZN03 302 aaPredicted RBP12.18□□□□□ -0.46
COL7A1-204ENST00000462475 Q6ZS49 121 aa12.18□□□□□ -0.46
COL7A1-204ENST00000462475 OR2K2Q8NGT1 345 aa12.18□□□□□ -0.46
COL7A1-204ENST00000462475 CEPT1Q9Y6K0 416 aa12.18□□□□□ -0.46
COL7A1-204ENST00000462475 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.17□□□□□ -0.46
COL7A1-204ENST00000462475 TRAV1-2A0A0B4J238 106 aa12.17□□□□□ -0.46
COL7A1-204ENST00000462475 PDCD5O14737 125 aa12.17□□□□□ -0.46
COL7A1-204ENST00000462475 TALDO1P37837 337 aa12.17□□□□□ -0.46
COL7A1-204ENST00000462475 ATP5G2Q06055 141 aa12.17□□□□□ -0.46
COL7A1-204ENST00000462475 OR2B11Q5JQS5 317 aa12.17□□□□□ -0.46
COL7A1-204ENST00000462475 C19orf35Q6ZS72 473 aa12.17□□□□□ -0.46
COL7A1-204ENST00000462475 SPIN2AQ99865 258 aa12.17□□□□□ -0.46
COL7A1-204ENST00000462475 SPIN2BQ9BPZ2 258 aa12.17□□□□□ -0.46
COL7A1-204ENST00000462475 NEURL2Q9BR09 285 aa12.17□□□□□ -0.46
COL7A1-204ENST00000462475 WFDC10AQ9H1F0 79 aa12.17□□□□□ -0.46
COL7A1-204ENST00000462475 HIPK2Q9H2X6 1198 aa12.17□□□□□ -0.46
COL7A1-204ENST00000462475 ZNF785A8K8V0 405 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 PPP5D1E7EU14 171 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 AIREO43918 545 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 FCGR3BO75015 233 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 TUSC2O75896 110 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 OR2J3O76001 311 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 ACTL6BO94805 426 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 CD7P09564 240 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 RPL30P62888 115 aaKnown RBP12.16□□□□□ -0.46
COL7A1-204ENST00000462475 TBCEQ15813 527 aaPredicted RBP12.16□□□□□ -0.46
COL7A1-204ENST00000462475 KCTD9Q7L273 389 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 ZNF367Q7RTV3 350 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 NR2C2APQ86WQ0 139 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 MMD2Q8IY49 270 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 TTC9CQ8N5M4 171 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 ZNF645Q8N7E2 425 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 DYNLRB2Q8TF09 96 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 DMRT1Q9Y5R6 373 aa12.16□□□□□ -0.46
COL7A1-204ENST00000462475 SMIM30A4D0T7 59 aa12.15□□□□□ -0.46
COL7A1-204ENST00000462475 METTL21EPA6NDL7 271 aa12.15□□□□□ -0.46
COL7A1-204ENST00000462475 HMX3A6NHT5 357 aa12.15□□□□□ -0.46
COL7A1-204ENST00000462475 CREBL2O60519 120 aaPredicted RBP12.15□□□□□ -0.46
COL7A1-204ENST00000462475 TPPPO94811 219 aa12.15□□□□□ -0.46
COL7A1-204ENST00000462475 HLA-AP01891 365 aaKnown RBP12.15□□□□□ -0.46
COL7A1-204ENST00000462475 RAB3BP20337 219 aa12.15□□□□□ -0.46
COL7A1-204ENST00000462475 NFYAP23511 347 aaPredicted RBP12.15□□□□□ -0.46
COL7A1-204ENST00000462475 DTYMKP23919 212 aa12.15□□□□□ -0.46
COL7A1-204ENST00000462475 MYL9P24844 172 aa12.15□□□□□ -0.46
COL7A1-204ENST00000462475 C15orf32Q32M92 178 aa12.15□□□□□ -0.46
COL7A1-204ENST00000462475 LAX1Q8IWV1 398 aa12.15□□□□□ -0.46
COL7A1-204ENST00000462475 VKORC1L1Q8N0U8 176 aa12.15□□□□□ -0.46
COL7A1-204ENST00000462475 DEFB125Q8N687 156 aa12.15□□□□□ -0.46
COL7A1-204ENST00000462475 NECAP1Q8NC96 275 aa12.15□□□□□ -0.46
COL7A1-204ENST00000462475 DCUN1D5Q9BTE7 237 aa12.15□□□□□ -0.46
COL7A1-204ENST00000462475 NDUFB11Q9NX14 153 aa12.15□□□□□ -0.46
COL7A1-204ENST00000462475 RBMX2Q9Y388 322 aaKnown RBP12.15□□□□□ -0.46
COL7A1-204ENST00000462475 RBMY1BA6NDE4 496 aaKnown RBP12.14□□□□□ -0.47
COL7A1-204ENST00000462475 RBMY1EA6NEQ0 496 aaKnown RBP12.14□□□□□ -0.47
COL7A1-204ENST00000462475 C2orf70A6NJV1 201 aa12.14□□□□□ -0.47
COL7A1-204ENST00000462475 TEX22C9J3V5 150 aa12.14□□□□□ -0.47
COL7A1-204ENST00000462475 IGLV2-14P01704 120 aa12.14□□□□□ -0.47
COL7A1-204ENST00000462475 RBMY1DP0C7P1 496 aaKnown RBP12.14□□□□□ -0.47
COL7A1-204ENST00000462475 DEFB114Q30KQ6 69 aa12.14□□□□□ -0.47
COL7A1-204ENST00000462475 CENPOQ9BU64 300 aa12.14□□□□□ -0.47
COL7A1-204ENST00000462475 ST6GALNAC5Q9BVH7 336 aa12.14□□□□□ -0.47
COL7A1-204ENST00000462475 ATG5Q9H1Y0 275 aa12.14□□□□□ -0.47
COL7A1-204ENST00000462475 VCX3BQ9H321 246 aa12.14□□□□□ -0.47
COL7A1-204ENST00000462475 SLC2A8Q9NY64 477 aa12.14□□□□□ -0.47
COL7A1-204ENST00000462475 OR2W1Q9Y3N9 320 aa12.14□□□□□ -0.47
COL7A1-204ENST00000462475 SELENOKQ9Y6D0 94 aa12.14□□□□□ -0.47
COL7A1-204ENST00000462475 IGKV1D-13A0A0B4J2D9 117 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 A0A1B0GW64 132 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 TRDV1A0A1B0GX56 115 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 E7EUB6 86 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 HLA-DQB1P01920 261 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 IGKV1-13P0DP09 117 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 FOLR2P14207 255 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 CD36P16671 472 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 GUCA2BQ16661 112 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 CDNFQ49AH0 187 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 C22orf42Q6IC83 251 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 NUDCD2Q8WVJ2 157 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 CACNG8Q8WXS5 425 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 KCTD12Q96CX2 325 aaKnown RBP12.13□□□□□ -0.47
COL7A1-204ENST00000462475 WDR89Q96FK6 387 aaPredicted RBP12.13□□□□□ -0.47
COL7A1-204ENST00000462475 OR51E2Q9H255 320 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 SRD5A3Q9H8P0 318 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 ZC4H2Q9NQZ6 224 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 ZNF257Q9Y2Q1 563 aa12.13□□□□□ -0.47
COL7A1-204ENST00000462475 MRPS7Q9Y2R9 242 aaKnown RBP12.13□□□□□ -0.47
COL7A1-204ENST00000462475 PRELID3BQ9Y3B1 194 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms