RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 PRSS3P35030 304 aa17.81■□□□□ 0.44
PTPN4-208ENST00000460289 MRGPRG-AS1Q2M3A8 158 aa17.81■□□□□ 0.44
PTPN4-208ENST00000460289 IDO2Q6ZQW0 420 aa17.81■□□□□ 0.44
PTPN4-208ENST00000460289 ANKRD13BQ86YJ7 626 aa17.81■□□□□ 0.44
PTPN4-208ENST00000460289 RHOVQ96L33 236 aa17.81■□□□□ 0.44
PTPN4-208ENST00000460289 PHB2Q99623 299 aa17.81■□□□□ 0.44
PTPN4-208ENST00000460289 CCL28Q9NRJ3 127 aa17.81■□□□□ 0.44
PTPN4-208ENST00000460289 TAS2R8Q9NYW2 309 aa17.81■□□□□ 0.44
PTPN4-208ENST00000460289 DNAH3Q8TD57 4116 aa17.81■□□□□ 0.44
PTPN4-208ENST00000460289 MSGN1A6NI15 193 aa17.8■□□□□ 0.44
PTPN4-208ENST00000460289 LINC01619G3V211 115 aa17.8■□□□□ 0.44
PTPN4-208ENST00000460289 K7EIL1 84 aa17.8■□□□□ 0.44
PTPN4-208ENST00000460289 ACTL6BO94805 426 aa17.8■□□□□ 0.44
PTPN4-208ENST00000460289 BRI3O95415 125 aa17.8■□□□□ 0.44
PTPN4-208ENST00000460289 SAA1P0DJI8 122 aaPredicted RBP17.8■□□□□ 0.44
PTPN4-208ENST00000460289 KIR2DS2P43631 304 aa17.8■□□□□ 0.44
PTPN4-208ENST00000460289 DGCR2P98153 550 aa17.8■□□□□ 0.44
PTPN4-208ENST00000460289 TNXAQ16473 311 aa17.8■□□□□ 0.44
PTPN4-208ENST00000460289 OR2B11Q5JQS5 317 aa17.8■□□□□ 0.44
PTPN4-208ENST00000460289 MMD2Q8IY49 270 aa17.8■□□□□ 0.44
PTPN4-208ENST00000460289 VSTM2AQ8TAG5 236 aa17.8■□□□□ 0.44
PTPN4-208ENST00000460289 SLC5A7Q9GZV3 580 aa17.8■□□□□ 0.44
PTPN4-208ENST00000460289 ALX4Q9H161 411 aaPredicted RBP17.8■□□□□ 0.44
PTPN4-208ENST00000460289 A0A0G2JLM5 398 aa17.79■□□□□ 0.44
PTPN4-208ENST00000460289 INSL3P51460 131 aa17.79■□□□□ 0.44
PTPN4-208ENST00000460289 ASPHD1Q5U4P2 390 aa17.79■□□□□ 0.44
PTPN4-208ENST00000460289 BORCS5Q969J3 196 aa17.79■□□□□ 0.44
PTPN4-208ENST00000460289 MRPS26Q9BYN8 205 aaKnown RBP17.79■□□□□ 0.44
PTPN4-208ENST00000460289 ZNF430Q9H8G1 570 aaPredicted RBP17.79■□□□□ 0.44
PTPN4-208ENST00000460289 ANAPC10Q9UM13 185 aa17.79■□□□□ 0.44
PTPN4-208ENST00000460289 C13orf42A0A1B0GVH6 325 aa17.78■□□□□ 0.44
PTPN4-208ENST00000460289 WI2-2373I1.2A0A1W2PRP0 233 aa17.78■□□□□ 0.44
PTPN4-208ENST00000460289 GABARAPO95166 117 aa17.78■□□□□ 0.44
PTPN4-208ENST00000460289 IGHV3-11P01762 117 aa17.78■□□□□ 0.44
PTPN4-208ENST00000460289 HSPB1P04792 205 aaKnown RBP17.78■□□□□ 0.44
PTPN4-208ENST00000460289 EIF4EP06730 217 aaKnown RBP17.78■□□□□ 0.44
PTPN4-208ENST00000460289 NAT1P18440 290 aa17.78■□□□□ 0.44
PTPN4-208ENST00000460289 TAS2R46P59540 309 aa17.78■□□□□ 0.44
PTPN4-208ENST00000460289 FXYD4P59646 89 aa17.78■□□□□ 0.44
PTPN4-208ENST00000460289 DEFB121Q5J5C9 76 aa17.78■□□□□ 0.44
PTPN4-208ENST00000460289 MZT2AQ6P582 158 aa17.78■□□□□ 0.44
PTPN4-208ENST00000460289 DHRS11Q6UWP2 260 aa17.78■□□□□ 0.44
PTPN4-208ENST00000460289 SRSF12Q8WXF0 261 aaKnown RBP17.78■□□□□ 0.44
PTPN4-208ENST00000460289 AIFM2Q9BRQ8 373 aa17.78■□□□□ 0.44
PTPN4-208ENST00000460289 EHFQ9NZC4 300 aa17.78■□□□□ 0.44
PTPN4-208ENST00000460289 OVOL1O14753 267 aa17.77■□□□□ 0.44
PTPN4-208ENST00000460289 TNFSF12O43508 249 aa17.77■□□□□ 0.44
PTPN4-208ENST00000460289 OR2A4O95047 310 aa17.77■□□□□ 0.44
PTPN4-208ENST00000460289 HRASP01112 189 aa17.77■□□□□ 0.44
PTPN4-208ENST00000460289 HERV-K104P61576 105 aa17.77■□□□□ 0.44
PTPN4-208ENST00000460289 CATR1Q13166 79 aa17.77■□□□□ 0.44
PTPN4-208ENST00000460289 CTF1Q16619 201 aa17.77■□□□□ 0.44
PTPN4-208ENST00000460289 DCUN1D4Q92564 292 aa17.77■□□□□ 0.44
PTPN4-208ENST00000460289 AP3S1Q92572 193 aa17.77■□□□□ 0.44
PTPN4-208ENST00000460289 OR2A7Q96R45 310 aa17.77■□□□□ 0.44
PTPN4-208ENST00000460289 SPIN2AQ99865 258 aa17.77■□□□□ 0.44
PTPN4-208ENST00000460289 SPIN2BQ9BPZ2 258 aa17.77■□□□□ 0.44
PTPN4-208ENST00000460289 TINAGL1Q9GZM7 467 aaPredicted RBP17.77■□□□□ 0.44
PTPN4-208ENST00000460289 SCOCQ9UIL1 159 aa17.77■□□□□ 0.44
PTPN4-208ENST00000460289 IGHV4OR15-8A0A075B7B6 117 aa17.76■□□□□ 0.43
PTPN4-208ENST00000460289 A0A087WW49 117 aa17.76■□□□□ 0.43
PTPN4-208ENST00000460289 MPPED1O15442 326 aa17.76■□□□□ 0.43
PTPN4-208ENST00000460289 RFX2P48378 723 aa17.76■□□□□ 0.43
PTPN4-208ENST00000460289 BRWD1-AS2P59051 145 aa17.76■□□□□ 0.43
PTPN4-208ENST00000460289 DCTN2Q13561 401 aaKnown RBP17.76■□□□□ 0.43
PTPN4-208ENST00000460289 DYRK1AQ13627 763 aa17.76■□□□□ 0.43
PTPN4-208ENST00000460289 GPR107Q5VW38 600 aa17.76■□□□□ 0.43
PTPN4-208ENST00000460289 OR5H2Q8NGV7 314 aa17.76■□□□□ 0.43
PTPN4-208ENST00000460289 NAA50Q9GZZ1 169 aaKnown RBP17.76■□□□□ 0.43
PTPN4-208ENST00000460289 SCPEP1Q9HB40 452 aa17.76■□□□□ 0.43
PTPN4-208ENST00000460289 COA4Q9NYJ1 87 aa17.76■□□□□ 0.43
PTPN4-208ENST00000460289 PMP2P02689 132 aa17.75■□□□□ 0.43
PTPN4-208ENST00000460289 OR9G9P0C7N8 305 aa17.75■□□□□ 0.43
PTPN4-208ENST00000460289 ELK1P19419 428 aa17.75■□□□□ 0.43
PTPN4-208ENST00000460289 GPR141Q7Z602 305 aa17.75■□□□□ 0.43
PTPN4-208ENST00000460289 ZNF429Q86V71 674 aa17.75■□□□□ 0.43
PTPN4-208ENST00000460289 TMEM17Q86X19 198 aa17.75■□□□□ 0.43
PTPN4-208ENST00000460289 VKORC1L1Q8N0U8 176 aa17.75■□□□□ 0.43
PTPN4-208ENST00000460289 SPAG16Q8N0X2 631 aa17.75■□□□□ 0.43
PTPN4-208ENST00000460289 GPX8Q8TED1 209 aa17.75■□□□□ 0.43
PTPN4-208ENST00000460289 DLX4Q92988 240 aaPredicted RBP17.75■□□□□ 0.43
PTPN4-208ENST00000460289 USMG5Q96IX5 58 aa17.75■□□□□ 0.43
PTPN4-208ENST00000460289 GPHA2Q96T91 129 aa17.75■□□□□ 0.43
PTPN4-208ENST00000460289 RANGRFQ9HD47 186 aaPredicted RBP17.75■□□□□ 0.43
PTPN4-208ENST00000460289 RBFOX2O43251 390 aaKnown RBP eCLIP17.74■□□□□ 0.437e-8■□□□□ 11.2
PTPN4-208ENST00000460289 HPGDSO60760 199 aa17.74■□□□□ 0.43
PTPN4-208ENST00000460289 KBTBD11O94819 623 aa17.74■□□□□ 0.43
PTPN4-208ENST00000460289 APELAP0DMC3 54 aa17.74■□□□□ 0.43
PTPN4-208ENST00000460289 ZNF182P17025 639 aaPredicted RBP17.74■□□□□ 0.43
PTPN4-208ENST00000460289 MAS1LP35410 378 aa17.74■□□□□ 0.43
PTPN4-208ENST00000460289 SLURP1P55000 103 aa17.74■□□□□ 0.43
PTPN4-208ENST00000460289 ZNF818PQ6ZRF7 136 aa17.74■□□□□ 0.43
PTPN4-208ENST00000460289 PUSL1Q8N0Z8 303 aaKnown RBP17.74■□□□□ 0.43
PTPN4-208ENST00000460289 TMEM167AQ8TBQ9 72 aa17.74■□□□□ 0.43
PTPN4-208ENST00000460289 ZNF2Q9BSG1 426 aaPredicted RBP17.74■□□□□ 0.43
PTPN4-208ENST00000460289 SULT1C2O00338 296 aa17.73■□□□□ 0.43
PTPN4-208ENST00000460289 ECI1P42126 302 aa17.73■□□□□ 0.43
PTPN4-208ENST00000460289 LYSMD2Q8IV50 215 aa17.73■□□□□ 0.43
PTPN4-208ENST00000460289 ADAD2Q8NCV1 583 aaKnown RBP17.73■□□□□ 0.43
PTPN4-208ENST00000460289 OR6F1Q8NGZ6 308 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms