RNA–Protein interactions for RNA: ENST00000460132.5

PLOD3-208, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, human

TSL 3

Gene PLOD3, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLOD3-208	ENST00000460132	NCS1	P62166	190 aa		11.26	□□□□□ -0.61
PLOD3-208	ENST00000460132	CDK10	Q15131	360 aa		11.26	□□□□□ -0.61
PLOD3-208	ENST00000460132	UBE2NL	Q5JXB2	153 aa		11.26	□□□□□ -0.61
PLOD3-208	ENST00000460132	VKORC1L1	Q8N0U8	176 aa		11.26	□□□□□ -0.61
PLOD3-208	ENST00000460132	MFSD4A	Q8N468	514 aa		11.26	□□□□□ -0.61
PLOD3-208	ENST00000460132	SECTM1	Q8WVN6	248 aa		11.26	□□□□□ -0.61
PLOD3-208	ENST00000460132	TCTEX1D2	Q8WW35	142 aa		11.26	□□□□□ -0.61
PLOD3-208	ENST00000460132	ACOT12	Q8WYK0	555 aa		11.26	□□□□□ -0.61
PLOD3-208	ENST00000460132	SLC25A46	Q96AG3	418 aa		11.26	□□□□□ -0.61
PLOD3-208	ENST00000460132	PHB2	Q99623	299 aa		11.26	□□□□□ -0.61
PLOD3-208	ENST00000460132	FUNDC2	Q9BWH2	189 aa		11.26	□□□□□ -0.61
PLOD3-208	ENST00000460132	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.26	□□□□□ -0.61
PLOD3-208	ENST00000460132	CCL28	Q9NRJ3	127 aa		11.26	□□□□□ -0.61
PLOD3-208	ENST00000460132	TAS2R8	Q9NYW2	309 aa		11.26	□□□□□ -0.61
PLOD3-208	ENST00000460132	MRPS7	Q9Y2R9	242 aa	Known RBP	11.26	□□□□□ -0.61
PLOD3-208	ENST00000460132	C13orf42	A0A1B0GVH6	325 aa		11.25	□□□□□ -0.61
PLOD3-208	ENST00000460132	BRI3	O95415	125 aa		11.25	□□□□□ -0.61
PLOD3-208	ENST00000460132	PPY	P01298	95 aa		11.25	□□□□□ -0.61
PLOD3-208	ENST00000460132	ZNF66	Q6ZN08	573 aa		11.25	□□□□□ -0.61
PLOD3-208	ENST00000460132	ZNF429	Q86V71	674 aa		11.25	□□□□□ -0.61
PLOD3-208	ENST00000460132	OR5AP2	Q8NGF4	316 aa		11.25	□□□□□ -0.61
PLOD3-208	ENST00000460132	OR13F1	Q8NGS4	319 aa		11.25	□□□□□ -0.61
PLOD3-208	ENST00000460132	SRSF12	Q8WXF0	261 aa	Known RBP	11.25	□□□□□ -0.61
PLOD3-208	ENST00000460132	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.25	□□□□□ -0.61
PLOD3-208	ENST00000460132	COA4	Q9NYJ1	87 aa		11.25	□□□□□ -0.61
PLOD3-208	ENST00000460132	LSM4	Q9Y4Z0	139 aa	Known RBP	11.25	□□□□□ -0.61
PLOD3-208	ENST00000460132	COL7A1	Q02388	2944 aa		11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132		A0A0G2JLM5	398 aa		11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132	ANKRD34B	A5PLL1	514 aa		11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132	TNFSF12	O43508	249 aa		11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132	SAP30	O75446	220 aa		11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132	TAS2R20	P59543	309 aa		11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132	VBP1	P61758	197 aa		11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132	DEFA5	Q01523	94 aa		11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132	TMEM69	Q5SWH9	247 aa		11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132	MMD2	Q8IY49	270 aa		11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132	ADAD2	Q8NCV1	583 aa	Known RBP	11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132	OR4S2	Q8NH73	311 aa		11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132	GIMAP1	Q8WWP7	306 aa		11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132	B9D2	Q9BPU9	175 aa		11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132	SLC5A7	Q9GZV3	580 aa		11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.24	□□□□□ -0.61
PLOD3-208	ENST00000460132	TNC	P24821	2201 aa		11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	MPPED1	O15442	326 aa		11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	CREBL2	O60519	120 aa	Predicted RBP	11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	RBMXL2	O75526	392 aa	Known RBP	11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	ACTL6B	O94805	426 aa		11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	OR2A4	O95047	310 aa		11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	EIF4E	P06730	217 aa	Known RBP	11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	OR9G9	P0C7N8	305 aa		11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	FXYD4	P59646	89 aa		11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	CD69	Q07108	199 aa		11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	DCTN2	Q13561	401 aa	Known RBP	11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	MSMO1	Q15800	293 aa		11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	C10orf55	Q5SWW7	151 aa		11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	ACSM6	Q6P461	480 aa		11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	KCTD12	Q96CX2	325 aa	Known RBP	11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	OR2A7	Q96R45	310 aa		11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	RANGRF	Q9HD47	186 aa	Predicted RBP	11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	IFT46	Q9NQC8	304 aa		11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	COMMD3	Q9UBI1	195 aa		11.23	□□□□□ -0.61
PLOD3-208	ENST00000460132	RFX2	P48378	723 aa		11.22	□□□□□ -0.61
PLOD3-208	ENST00000460132	DYRK1A	Q13627	763 aa		11.22	□□□□□ -0.61
PLOD3-208	ENST00000460132	C11orf87	Q6NUJ2	197 aa		11.22	□□□□□ -0.61
PLOD3-208	ENST00000460132	PUSL1	Q8N0Z8	303 aa	Known RBP	11.22	□□□□□ -0.61
PLOD3-208	ENST00000460132	ZBTB34	Q8NCN2	500 aa		11.22	□□□□□ -0.61
PLOD3-208	ENST00000460132	TMEM167A	Q8TBQ9	72 aa		11.22	□□□□□ -0.61
PLOD3-208	ENST00000460132	USMG5	Q96IX5	58 aa		11.22	□□□□□ -0.61
PLOD3-208	ENST00000460132	SPIN2A	Q99865	258 aa		11.22	□□□□□ -0.61
PLOD3-208	ENST00000460132	SPIN2B	Q9BPZ2	258 aa		11.22	□□□□□ -0.61
PLOD3-208	ENST00000460132	ANAPC10	Q9UM13	185 aa		11.22	□□□□□ -0.61
PLOD3-208	ENST00000460132	SULT1C2	O00338	296 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	KBTBD11	O94819	623 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	LY86	O95711	162 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	HRAS	P01112	189 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	PMP2	P02689	132 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	PRH1	P02810	166 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	SMIM18	P0DKX4	95 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	NAT1	P18440	290 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	ZP3	P21754	424 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	PRSS3	P35030	304 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	KIR2DS2	P43631	304 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	ZNF343	Q6P1L6	599 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	DHRS11	Q6UWP2	260 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	ZNF818P	Q6ZRF7	136 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	SSX9	Q7RTT3	188 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	TMEM17	Q86X19	198 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	SPAG16	Q8N0X2	631 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	TTC9C	Q8N5M4	171 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	VSTM2A	Q8TAG5	236 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	NAA50	Q9GZZ1	169 aa	Known RBP	11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	EHF	Q9NZC4	300 aa		11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	PEF1	Q9UBV8	284 aa	Known RBP	11.21	□□□□□ -0.61
PLOD3-208	ENST00000460132	HMX3	A6NHT5	357 aa		11.2	□□□□□ -0.62
PLOD3-208	ENST00000460132	TEX22	C9J3V5	150 aa		11.2	□□□□□ -0.62
PLOD3-208	ENST00000460132		E7EUB6	86 aa		11.2	□□□□□ -0.62
PLOD3-208	ENST00000460132	TRBV12-3	P01733	135 aa		11.2	□□□□□ -0.62
PLOD3-208	ENST00000460132	IL6R	P08887	468 aa	Predicted RBP	11.2	□□□□□ -0.62
PLOD3-208	ENST00000460132	SPN	P16150	400 aa		11.2	□□□□□ -0.62
PLOD3-208	ENST00000460132	GNRHR	P30968	328 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms