RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 BEST4Q8NFU0 473 aa7.7□□□□□ -1.18
HDLBP-228ENST00000459788 NUDCD2Q8WVJ2 157 aa7.7□□□□□ -1.18
HDLBP-228ENST00000459788 OR5B12Q96R08 314 aa7.7□□□□□ -1.18
HDLBP-228ENST00000459788 KLK9Q9UKQ9 250 aa7.7□□□□□ -1.18
HDLBP-228ENST00000459788 A0A087WXM4 84 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 TRBV9A0A0B4J1U6 114 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 AIREO43918 545 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 HRASP01112 189 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 IGLV1-51P01701 117 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 IGLV2-14P01704 120 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 SLURP1P55000 103 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 PJVKQ0ZLH3 352 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 TNXAQ16473 311 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 CADM3Q8N126 398 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 TTC9CQ8N5M4 171 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 OR5T1Q8NG75 326 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 OR4A5Q8NH83 315 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 TMEM167AQ8TBQ9 72 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 SRSF12Q8WXF0 261 aaKnown RBP7.69□□□□□ -1.18
HDLBP-228ENST00000459788 SNAPC3Q92966 411 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 KCTD12Q96CX2 325 aaKnown RBP7.69□□□□□ -1.18
HDLBP-228ENST00000459788 SLC25A38Q96DW6 304 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 S100A16Q96FQ6 103 aaKnown RBP7.69□□□□□ -1.18
HDLBP-228ENST00000459788 CMTM3Q96MX0 182 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 MS4A10Q96PG2 267 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 PRR25Q96S07 402 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 PHB2Q99623 299 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 ALX4Q9H161 411 aaPredicted RBP7.69□□□□□ -1.18
HDLBP-228ENST00000459788 AUNIPQ9H7T9 357 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 ZNF430Q9H8G1 570 aaPredicted RBP7.69□□□□□ -1.18
HDLBP-228ENST00000459788 ZNF355PQ9NSJ1 428 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 PEF1Q9UBV8 284 aaKnown RBP7.69□□□□□ -1.18
HDLBP-228ENST00000459788 ELF5Q9UKW6 265 aaPredicted RBP7.69□□□□□ -1.18
HDLBP-228ENST00000459788 ZNF257Q9Y2Q1 563 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 U3KQK5 164 aa7.69□□□□□ -1.18
HDLBP-228ENST00000459788 TRAV18A0A075B6X5 111 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 LOC100506127A0A0U1RQW1 187 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 MSGN1A6NI15 193 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 A8MZ25 164 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 H0Y980 276 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 XRCC3O43542 346 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 FCGR3BO75015 233 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 KBTBD11O94819 623 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 OR2A4O95047 310 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 TNFAIP8O95379 198 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 IGHV3-11P01762 117 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 SAA1P0DJI8 122 aaPredicted RBP7.68□□□□□ -1.18
HDLBP-228ENST00000459788 GP9P14770 177 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 NFYAP23511 347 aaPredicted RBP7.68□□□□□ -1.18
HDLBP-228ENST00000459788 MXD1Q05195 221 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 NEDD8Q15843 81 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 IDNKQ5T6J7 187 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 PUSL1Q8N0Z8 303 aaKnown RBP7.68□□□□□ -1.18
HDLBP-228ENST00000459788 MFSD4AQ8N468 514 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 NECAP1Q8NC96 275 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 OR5AP2Q8NGF4 316 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 OR2K2Q8NGT1 345 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 CD300LFQ8TDQ1 290 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 GIMAP1Q8WWP7 306 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 OR2A7Q96R45 310 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 SRSF8Q9BRL6 282 aaKnown RBP7.68□□□□□ -1.18
HDLBP-228ENST00000459788 COA4Q9NYJ1 87 aa7.68□□□□□ -1.18
HDLBP-228ENST00000459788 IGKV1D-13A0A0B4J2D9 117 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 SMIM30A4D0T7 59 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 NPIPB5A8MRT5 1133 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 MPPED1O15442 326 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 LY86O95711 162 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 DHFRP00374 187 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 PPYP01298 95 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 IGKV1-13P0DP09 117 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 SPNP16150 400 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 RPL30P62888 115 aaKnown RBP7.67□□□□□ -1.18
HDLBP-228ENST00000459788 CATR1Q13166 79 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 DYRK1AQ13627 763 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 POU2AF1Q16633 256 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 UBE2NLQ5JXB2 153 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 THOC7Q6I9Y2 204 aaKnown RBP7.67□□□□□ -1.18
HDLBP-228ENST00000459788 C11orf87Q6NUJ2 197 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 ANKRD13BQ86YJ7 626 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 OR9G4Q8NGQ1 327 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 OR5H6Q8NGV6 325 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 CASTOR1Q8WTX7 329 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 ACOT12Q8WYK0 555 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 DCUN1D5Q9BTE7 237 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 BET1LQ9NYM9 111 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 PEMTQ9UBM1 199 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 ANAPC10Q9UM13 185 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 NBEAL2Q6ZNJ1 2754 aa7.67□□□□□ -1.18
HDLBP-228ENST00000459788 DNAH7Q8WXX0 4024 aa7.66□□□□□ -1.18
HDLBP-228ENST00000459788 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.66□□□□□ -1.18
HDLBP-228ENST00000459788 TRIM64CA6NLI5 447 aa7.66□□□□□ -1.18
HDLBP-228ENST00000459788 CRYGCP07315 174 aa7.66□□□□□ -1.18
HDLBP-228ENST00000459788 CLEC2LP0C7M8 214 aa7.66□□□□□ -1.18
HDLBP-228ENST00000459788 ZNF735P0CB33 412 aa7.66□□□□□ -1.18
HDLBP-228ENST00000459788 HIST1H1BP16401 226 aaKnown RBP7.66□□□□□ -1.18
HDLBP-228ENST00000459788 NAT1P18440 290 aa7.66□□□□□ -1.18
HDLBP-228ENST00000459788 FCGR2CP31995 323 aa7.66□□□□□ -1.18
HDLBP-228ENST00000459788 TAS2R31P59538 309 aa7.66□□□□□ -1.18
HDLBP-228ENST00000459788 TAS2R46P59540 309 aa7.66□□□□□ -1.18
HDLBP-228ENST00000459788 ATP5G2Q06055 141 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms