RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 BCL7BQ9BQE9 202 aa12.49□□□□□ -0.41
COL7A1-203ENST00000459756 RGS5O15539 181 aa12.48□□□□□ -0.41
COL7A1-203ENST00000459756 RAMP3O60896 148 aa12.48□□□□□ -0.41
COL7A1-203ENST00000459756 FCGR3BO75015 233 aa12.48□□□□□ -0.41
COL7A1-203ENST00000459756 TRGV3P03979 118 aa12.48□□□□□ -0.41
COL7A1-203ENST00000459756 FCER2P06734 321 aa12.48□□□□□ -0.41
COL7A1-203ENST00000459756 FCGR2CP31995 323 aa12.48□□□□□ -0.41
COL7A1-203ENST00000459756 MSMO1Q15800 293 aa12.48□□□□□ -0.41
COL7A1-203ENST00000459756 PRSS8Q16651 343 aa12.48□□□□□ -0.41
COL7A1-203ENST00000459756 POC5Q8NA72 575 aa12.48□□□□□ -0.41
COL7A1-203ENST00000459756 DCUN1D5Q9BTE7 237 aa12.48□□□□□ -0.41
COL7A1-203ENST00000459756 ALX4Q9H161 411 aaPredicted RBP12.48□□□□□ -0.41
COL7A1-203ENST00000459756 RSL24D1Q9UHA3 163 aaKnown RBP12.48□□□□□ -0.41
COL7A1-203ENST00000459756 MEIS3P1A6NDR6 274 aa12.47□□□□□ -0.41
COL7A1-203ENST00000459756 LINC01619G3V211 115 aa12.47□□□□□ -0.41
COL7A1-203ENST00000459756 CREBL2O60519 120 aaPredicted RBP12.47□□□□□ -0.41
COL7A1-203ENST00000459756 BRI3O95415 125 aa12.47□□□□□ -0.41
COL7A1-203ENST00000459756 ELK1P19419 428 aa12.47□□□□□ -0.41
COL7A1-203ENST00000459756 INSL3P51460 131 aa12.47□□□□□ -0.41
COL7A1-203ENST00000459756 TAS2R20P59543 309 aa12.47□□□□□ -0.41
COL7A1-203ENST00000459756 RPL30P62888 115 aaKnown RBP12.47□□□□□ -0.41
COL7A1-203ENST00000459756 EIF4EBP1Q13541 118 aaPredicted RBP12.47□□□□□ -0.41
COL7A1-203ENST00000459756 DCTN2Q13561 401 aaKnown RBP12.47□□□□□ -0.41
COL7A1-203ENST00000459756 MRGPRG-AS1Q2M3A8 158 aa12.47□□□□□ -0.41
COL7A1-203ENST00000459756 ZNF66Q6ZN08 573 aa12.47□□□□□ -0.41
COL7A1-203ENST00000459756 OR5T1Q8NG75 326 aa12.47□□□□□ -0.41
COL7A1-203ENST00000459756 OR4S2Q8NH73 311 aa12.47□□□□□ -0.41
COL7A1-203ENST00000459756 DYNC2LI1Q8TCX1 351 aa12.47□□□□□ -0.41
COL7A1-203ENST00000459756 RHOVQ96L33 236 aa12.47□□□□□ -0.41
COL7A1-203ENST00000459756 C6orf62Q9GZU0 229 aaPredicted RBP12.47□□□□□ -0.41
COL7A1-203ENST00000459756 RBM38Q9H0Z9 239 aaKnown RBP12.47□□□□□ -0.41
COL7A1-203ENST00000459756 ZNF355PQ9NSJ1 428 aa12.47□□□□□ -0.41
COL7A1-203ENST00000459756 PPYP01298 95 aa12.46□□□□□ -0.41
COL7A1-203ENST00000459756 IGHV3-11P01762 117 aa12.46□□□□□ -0.41
COL7A1-203ENST00000459756 HSPB1P04792 205 aaKnown RBP12.46□□□□□ -0.41
COL7A1-203ENST00000459756 AADACP22760 399 aa12.46□□□□□ -0.41
COL7A1-203ENST00000459756 CDK10Q15131 360 aa12.46□□□□□ -0.41
COL7A1-203ENST00000459756 DEFB121Q5J5C9 76 aa12.46□□□□□ -0.41
COL7A1-203ENST00000459756 OR2B11Q5JQS5 317 aa12.46□□□□□ -0.41
COL7A1-203ENST00000459756 IDO2Q6ZQW0 420 aa12.46□□□□□ -0.41
COL7A1-203ENST00000459756 OR5AP2Q8NGF4 316 aa12.46□□□□□ -0.41
COL7A1-203ENST00000459756 TCTEX1D2Q8WW35 142 aa12.46□□□□□ -0.41
COL7A1-203ENST00000459756 DCUN1D4Q92564 292 aa12.46□□□□□ -0.41
COL7A1-203ENST00000459756 SNAPC3Q92966 411 aa12.46□□□□□ -0.41
COL7A1-203ENST00000459756 IFT46Q9NQC8 304 aa12.46□□□□□ -0.41
COL7A1-203ENST00000459756 TAS2R8Q9NYW2 309 aa12.46□□□□□ -0.41
COL7A1-203ENST00000459756 CCDC59Q9P031 241 aaKnown RBP12.46□□□□□ -0.41
COL7A1-203ENST00000459756 IGHV4OR15-8A0A075B7B6 117 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 A0A087WW49 117 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 A0A0G2JLM5 398 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 C13orf42A0A1B0GVH6 325 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 SMIM31A0A1B0GVY4 71 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 MSGN1A6NI15 193 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 OVOL1O14753 267 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 ACTL6BO94805 426 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 APOA1P02647 267 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 SAA1P0DJI8 122 aaPredicted RBP12.45□□□□□ -0.42
COL7A1-203ENST00000459756 TNXAQ16473 311 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 RNASE12Q5GAN4 147 aaKnown RBP12.45□□□□□ -0.42
COL7A1-203ENST00000459756 SNX29P2Q8IUI4 249 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 MFSD4AQ8N468 514 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 ZBTB34Q8NCN2 500 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 SECTM1Q8WVN6 248 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 GIMAP1Q8WWP7 306 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 SRSF12Q8WXF0 261 aaKnown RBP12.45□□□□□ -0.42
COL7A1-203ENST00000459756 PHB2Q99623 299 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 ZNF430Q9H8G1 570 aaPredicted RBP12.45□□□□□ -0.42
COL7A1-203ENST00000459756 EXTL2Q9UBQ6 330 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 TNCP24821 2201 aa12.45□□□□□ -0.42
COL7A1-203ENST00000459756 CTDSP2O14595 271 aa12.44□□□□□ -0.42
COL7A1-203ENST00000459756 KIR2DS2P43631 304 aa12.44□□□□□ -0.42
COL7A1-203ENST00000459756 SLURP1P55000 103 aa12.44□□□□□ -0.42
COL7A1-203ENST00000459756 LAX1Q8IWV1 398 aa12.44□□□□□ -0.42
COL7A1-203ENST00000459756 MMD2Q8IY49 270 aa12.44□□□□□ -0.42
COL7A1-203ENST00000459756 VSTM2AQ8TAG5 236 aa12.44□□□□□ -0.42
COL7A1-203ENST00000459756 DLX4Q92988 240 aaPredicted RBP12.44□□□□□ -0.42
COL7A1-203ENST00000459756 CMTM3Q96MX0 182 aa12.44□□□□□ -0.42
COL7A1-203ENST00000459756 SPIN2AQ99865 258 aa12.44□□□□□ -0.42
COL7A1-203ENST00000459756 SPIN2BQ9BPZ2 258 aa12.44□□□□□ -0.42
COL7A1-203ENST00000459756 TINAGL1Q9GZM7 467 aaPredicted RBP12.44□□□□□ -0.42
COL7A1-203ENST00000459756 SLC5A7Q9GZV3 580 aa12.44□□□□□ -0.42
COL7A1-203ENST00000459756 CCL28Q9NRJ3 127 aa12.44□□□□□ -0.42
COL7A1-203ENST00000459756 ANAPC10Q9UM13 185 aa12.44□□□□□ -0.42
COL7A1-203ENST00000459756 DPPA5A6NC42 116 aa12.43□□□□□ -0.42
COL7A1-203ENST00000459756 OR9G9P0C7N8 305 aa12.43□□□□□ -0.42
COL7A1-203ENST00000459756 PRSS3P35030 304 aa12.43□□□□□ -0.42
COL7A1-203ENST00000459756 ECI1P42126 302 aa12.43□□□□□ -0.42
COL7A1-203ENST00000459756 BRWD1-AS2P59051 145 aa12.43□□□□□ -0.42
COL7A1-203ENST00000459756 ZNF429Q86V71 674 aa12.43□□□□□ -0.42
COL7A1-203ENST00000459756 MCFD2Q8NI22 146 aa12.43□□□□□ -0.42
COL7A1-203ENST00000459756 BORCS5Q969J3 196 aa12.43□□□□□ -0.42
COL7A1-203ENST00000459756 MIXL1Q9H2W2 232 aa12.43□□□□□ -0.42
COL7A1-203ENST00000459756 COA4Q9NYJ1 87 aa12.43□□□□□ -0.42
COL7A1-203ENST00000459756 MPPED1O15442 326 aa12.42□□□□□ -0.42
COL7A1-203ENST00000459756 TNFSF12O43508 249 aa12.42□□□□□ -0.42
COL7A1-203ENST00000459756 OR2A4O95047 310 aa12.42□□□□□ -0.42
COL7A1-203ENST00000459756 HRASP01112 189 aa12.42□□□□□ -0.42
COL7A1-203ENST00000459756 APELAP0DMC3 54 aa12.42□□□□□ -0.42
COL7A1-203ENST00000459756 NAT1P18440 290 aa12.42□□□□□ -0.42
COL7A1-203ENST00000459756 TAS2R46P59540 309 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms