RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 GPR137BO60478 399 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 HOXB4P17483 251 aaPredicted RBP19.78■□□□□ 0.76
U2AF1-204ENST00000459639 HTR1DP28221 377 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 TNFRSF9Q07011 255 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 KLRD1Q13241 179 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 VKORC1L1Q8N0U8 176 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 RPEQ96AT9 228 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 ZC4H2Q9NQZ6 224 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 MED6O75586 246 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 TOX4O94842 621 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 DEFB113Q30KQ7 82 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 CRYBG3Q68DQ2 2970 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 SLC51BQ86UW2 128 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 OR2C3Q8N628 320 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 OR8H1Q8NGG4 311 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 OR4C13Q8NGP0 309 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 LHX4Q969G2 390 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 LYRM2Q9NU23 88 aaPredicted RBP19.78■□□□□ 0.76
U2AF1-204ENST00000459639 INSIG2Q9Y5U4 225 aa19.78■□□□□ 0.76
U2AF1-204ENST00000459639 ABCA2Q9BZC7 2435 aa19.77■□□□□ 0.76
U2AF1-204ENST00000459639 IGHV1-3A0A0C4DH29 117 aa19.77■□□□□ 0.76
U2AF1-204ENST00000459639 LEUTXA8MZ59 168 aa19.77■□□□□ 0.76
U2AF1-204ENST00000459639 CEACAM3P40198 252 aa19.77■□□□□ 0.76
U2AF1-204ENST00000459639 OR4A47Q6IF82 309 aa19.77■□□□□ 0.76
U2AF1-204ENST00000459639 TEX261Q6UWH6 196 aa19.77■□□□□ 0.76
U2AF1-204ENST00000459639 FLYWCH2Q96CP2 140 aaKnown RBP19.77■□□□□ 0.76
U2AF1-204ENST00000459639 DPM3Q9P2X0 92 aa19.77■□□□□ 0.76
U2AF1-204ENST00000459639 CACFD1Q9UGQ2 172 aa19.77■□□□□ 0.76
U2AF1-204ENST00000459639 U3KQ87 197 aa19.77■□□□□ 0.76
U2AF1-204ENST00000459639 FBN2P35556 2912 aa19.76■□□□□ 0.75
U2AF1-204ENST00000459639 RNASEK-C17orf49H0YIS7 233 aa19.76■□□□□ 0.75
U2AF1-204ENST00000459639 SHOXO15266 292 aa19.76■□□□□ 0.75
U2AF1-204ENST00000459639 RBMXL2O75526 392 aaKnown RBP19.76■□□□□ 0.75
U2AF1-204ENST00000459639 RELBQ01201 579 aa19.76■□□□□ 0.75
U2AF1-204ENST00000459639 TPTE2P1Q5T6R2 138 aa19.76■□□□□ 0.75
U2AF1-204ENST00000459639 ZNF767PQ75MW2 155 aa19.76■□□□□ 0.75
U2AF1-204ENST00000459639 OR4A16Q8NH70 328 aa19.76■□□□□ 0.75
U2AF1-204ENST00000459639 HARBI1Q96MB7 349 aa19.76■□□□□ 0.75
U2AF1-204ENST00000459639 WSB1Q9Y6I7 421 aa19.76■□□□□ 0.75
U2AF1-204ENST00000459639 TMEM50AO95807 157 aa19.75■□□□□ 0.75
U2AF1-204ENST00000459639 USF1P22415 310 aaPredicted RBP19.75■□□□□ 0.75
U2AF1-204ENST00000459639 PAX9P55771 341 aa19.75■□□□□ 0.75
U2AF1-204ENST00000459639 UBE2KP61086 200 aa19.75■□□□□ 0.75
U2AF1-204ENST00000459639 RPL23AP62750 156 aaKnown RBP19.75■□□□□ 0.75
U2AF1-204ENST00000459639 TBX15Q96SF7 602 aa19.75■□□□□ 0.75
U2AF1-204ENST00000459639 RBKSQ9H477 322 aa19.75■□□□□ 0.75
U2AF1-204ENST00000459639 LPAR2Q9HBW0 351 aa19.75■□□□□ 0.75
U2AF1-204ENST00000459639 ANKRD17O75179 2603 aaKnown RBP19.75■□□□□ 0.75
U2AF1-204ENST00000459639 TAAR5O14804 337 aa19.75■□□□□ 0.75
U2AF1-204ENST00000459639 CAV2P51636 162 aa19.75■□□□□ 0.75
U2AF1-204ENST00000459639 TAS2R30P59541 319 aa19.75■□□□□ 0.75
U2AF1-204ENST00000459639 UBA52P62987 128 aaKnown RBP19.75■□□□□ 0.75
U2AF1-204ENST00000459639 ZNF429Q86V71 674 aa19.75■□□□□ 0.75
U2AF1-204ENST00000459639 QTRT1Q9BXR0 403 aaKnown RBP19.75■□□□□ 0.75
U2AF1-204ENST00000459639 SLC25A31Q9H0C2 315 aa19.75■□□□□ 0.75
U2AF1-204ENST00000459639 IL6RP08887 468 aaPredicted RBP19.74■□□□□ 0.75
U2AF1-204ENST00000459639 OR2B8PP59922 312 aa19.74■□□□□ 0.75
U2AF1-204ENST00000459639 ZNF680Q8NEM1 530 aa19.74■□□□□ 0.75
U2AF1-204ENST00000459639 OR52E5Q8NH55 327 aa19.74■□□□□ 0.75
U2AF1-204ENST00000459639 MBD6Q96DN6 1003 aa19.74■□□□□ 0.75
U2AF1-204ENST00000459639 SMIM8Q96KF7 97 aa19.74■□□□□ 0.75
U2AF1-204ENST00000459639 BET1LQ9NYM9 111 aa19.74■□□□□ 0.75
U2AF1-204ENST00000459639 A0A1W2PPI3 338 aa19.73■□□□□ 0.75
U2AF1-204ENST00000459639 FAM24AA6NFZ4 105 aa19.73■□□□□ 0.75
U2AF1-204ENST00000459639 C15orf61A6NNL5 157 aa19.73■□□□□ 0.75
U2AF1-204ENST00000459639 SRRM4A7MD48 611 aaKnown RBP19.73■□□□□ 0.75
U2AF1-204ENST00000459639 EWSR1Q01844 656 aaKnown RBP eCLIP19.73■□□□□ 0.75
U2AF1-204ENST00000459639 PAX8Q06710 450 aa19.73■□□□□ 0.75
U2AF1-204ENST00000459639 LDLRAD2Q5SZI1 272 aa19.73■□□□□ 0.75
U2AF1-204ENST00000459639 MINOS1Q5TGZ0 78 aa19.73■□□□□ 0.75
U2AF1-204ENST00000459639 MOB3BQ86TA1 216 aa19.73■□□□□ 0.75
U2AF1-204ENST00000459639 PUSL1Q8N0Z8 303 aaKnown RBP19.73■□□□□ 0.75
U2AF1-204ENST00000459639 TMEM252Q8N6L7 170 aa19.73■□□□□ 0.75
U2AF1-204ENST00000459639 ZNF471Q9BX82 626 aaPredicted RBP19.73■□□□□ 0.75
U2AF1-204ENST00000459639 MINOS1-NBL1R4GNA1 71 aa19.73■□□□□ 0.75
U2AF1-204ENST00000459639 TACC2O95359 2948 aa19.73■□□□□ 0.75
U2AF1-204ENST00000459639 WNK2Q9Y3S1 2297 aa19.73■□□□□ 0.75
U2AF1-204ENST00000459639 TRAV3A0A0B4J244 114 aa19.72■□□□□ 0.75
U2AF1-204ENST00000459639 IGSF23A1L1A6 192 aa19.72■□□□□ 0.75
U2AF1-204ENST00000459639 IFNA7P01567 189 aa19.72■□□□□ 0.75
U2AF1-204ENST00000459639 SAA1P0DJI8 122 aaPredicted RBP19.72■□□□□ 0.75
U2AF1-204ENST00000459639 PDLIM3Q53GG5 364 aaPredicted RBP19.72■□□□□ 0.75
U2AF1-204ENST00000459639 OR8H3Q8N146 312 aa19.72■□□□□ 0.75
U2AF1-204ENST00000459639 MS4A7Q9GZW8 240 aaPredicted RBP19.72■□□□□ 0.75
U2AF1-204ENST00000459639 PAIP2BQ9ULR5 123 aaKnown RBP19.72■□□□□ 0.75
U2AF1-204ENST00000459639 FOXA2Q9Y261 457 aaPredicted RBP19.72■□□□□ 0.75
U2AF1-204ENST00000459639 PTPN13Q12923 2485 aa19.72■□□□□ 0.75
U2AF1-204ENST00000459639 CFDP00746 253 aaPredicted RBP19.71■□□□□ 0.75
U2AF1-204ENST00000459639 IAPPP10997 89 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 UBE2E1P51965 193 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 SPCS3P61009 180 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 RPS16P62249 146 aaKnown RBP19.71■□□□□ 0.75
U2AF1-204ENST00000459639 BAXQ07812 192 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 STOML3Q8TAV4 291 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 ST8SIA2Q92186 375 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 RBMXL1Q96E39 390 aaKnown RBP19.71■□□□□ 0.75
U2AF1-204ENST00000459639 C1orf159Q96HA4 380 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 CIB3Q96Q77 187 aaPredicted RBP19.71■□□□□ 0.75
U2AF1-204ENST00000459639 CYTL1Q9NRR1 136 aa19.71■□□□□ 0.75
U2AF1-204ENST00000459639 TMEM14BQ9NUH8 114 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms