RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 H2AFY2Q9P0M6 372 aaPredicted RBP11.27□□□□□ -0.61
SF3B4-202ENST00000457312 OR1A1Q9P1Q5 309 aa11.27□□□□□ -0.61
SF3B4-202ENST00000457312 LINC00588Q9Y4M8 146 aa11.27□□□□□ -0.61
SF3B4-202ENST00000457312 TNXBP22105 4242 aa11.27□□□□□ -0.61
SF3B4-202ENST00000457312 ZNF780AO75290 641 aaPredicted RBP11.26□□□□□ -0.61
SF3B4-202ENST00000457312 IFNA5P01569 189 aa11.26□□□□□ -0.61
SF3B4-202ENST00000457312 PLA2G1BP04054 148 aaKnown RBP11.26□□□□□ -0.61
SF3B4-202ENST00000457312 HTR1AP08908 422 aa11.26□□□□□ -0.61
SF3B4-202ENST00000457312 SIGIRRQ6IA17 410 aa11.26□□□□□ -0.61
SF3B4-202ENST00000457312 CXorf58Q96LI9 332 aa11.26□□□□□ -0.61
SF3B4-202ENST00000457312 C20orf24Q9BUV8 137 aa11.26□□□□□ -0.61
SF3B4-202ENST00000457312 ARL8BQ9NVJ2 186 aa11.26□□□□□ -0.61
SF3B4-202ENST00000457312 SMPD3Q9NY59 655 aaPredicted RBP11.26□□□□□ -0.61
SF3B4-202ENST00000457312 TAS2R4Q9NYW5 299 aa11.26□□□□□ -0.61
SF3B4-202ENST00000457312 IGLV11-55A0A075B6I3 123 aa11.25□□□□□ -0.61
SF3B4-202ENST00000457312 ACTL6BO94805 426 aa11.25□□□□□ -0.61
SF3B4-202ENST00000457312 BAG2O95816 211 aa11.25□□□□□ -0.61
SF3B4-202ENST00000457312 ASIPP42127 132 aa11.25□□□□□ -0.61
SF3B4-202ENST00000457312 TAGLNQ01995 201 aaKnown RBP11.25□□□□□ -0.61
SF3B4-202ENST00000457312 PTGES3Q15185 160 aaKnown RBP11.25□□□□□ -0.61
SF3B4-202ENST00000457312 Q6ZRN7 208 aaPredicted RBP11.25□□□□□ -0.61
SF3B4-202ENST00000457312 GID4Q8IVV7 300 aa11.25□□□□□ -0.61
SF3B4-202ENST00000457312 FAM24BQ8N5W8 94 aa11.25□□□□□ -0.61
SF3B4-202ENST00000457312 EDARADDQ8WWZ3 215 aa11.25□□□□□ -0.61
SF3B4-202ENST00000457312 S100A13Q99584 98 aa11.25□□□□□ -0.61
SF3B4-202ENST00000457312 NIPSNAP3BQ9BS92 247 aa11.25□□□□□ -0.61
SF3B4-202ENST00000457312 Q9H3A6 140 aa11.25□□□□□ -0.61
SF3B4-202ENST00000457312 SMPXQ9UHP9 88 aa11.25□□□□□ -0.61
SF3B4-202ENST00000457312 CHEK1O14757 476 aa11.24□□□□□ -0.61
SF3B4-202ENST00000457312 DFFBO76075 338 aa11.24□□□□□ -0.61
SF3B4-202ENST00000457312 GLAP06280 429 aa11.24□□□□□ -0.61
SF3B4-202ENST00000457312 CRYGCP07315 174 aa11.24□□□□□ -0.61
SF3B4-202ENST00000457312 AREGP15514 252 aa11.24□□□□□ -0.61
SF3B4-202ENST00000457312 EMP1P54849 157 aa11.24□□□□□ -0.61
SF3B4-202ENST00000457312 EFNB1P98172 346 aa11.24□□□□□ -0.61
SF3B4-202ENST00000457312 FAM90A2PQ658T7 463 aa11.24□□□□□ -0.61
SF3B4-202ENST00000457312 HS3ST5Q8IZT8 346 aa11.24□□□□□ -0.61
SF3B4-202ENST00000457312 ZNF556Q9HAH1 456 aa11.24□□□□□ -0.61
SF3B4-202ENST00000457312 DKK2Q9UBU2 259 aa11.24□□□□□ -0.61
SF3B4-202ENST00000457312 WARS2Q9UGM6 360 aaKnown RBP11.24□□□□□ -0.61
SF3B4-202ENST00000457312 DNAH8Q96JB1 4490 aa11.24□□□□□ -0.61
SF3B4-202ENST00000457312 DPPA5A6NC42 116 aa11.23□□□□□ -0.61
SF3B4-202ENST00000457312 K7EMT4 169 aa11.23□□□□□ -0.61
SF3B4-202ENST00000457312 NDUFA4O00483 81 aa11.23□□□□□ -0.61
SF3B4-202ENST00000457312 SAA1P0DJI8 122 aaPredicted RBP11.23□□□□□ -0.61
SF3B4-202ENST00000457312 ZNF93P35789 620 aaPredicted RBP11.23□□□□□ -0.61
SF3B4-202ENST00000457312 CBX3Q13185 183 aa11.23□□□□□ -0.61
SF3B4-202ENST00000457312 DDI2Q5TDH0 399 aa11.23□□□□□ -0.61
SF3B4-202ENST00000457312 CYP2R1Q6VVX0 501 aa11.23□□□□□ -0.61
SF3B4-202ENST00000457312 SVOPQ8N4V2 548 aa11.23□□□□□ -0.61
SF3B4-202ENST00000457312 PTX4Q96A99 478 aa11.23□□□□□ -0.61
SF3B4-202ENST00000457312 ELAC2Q9BQ52 826 aaKnown RBP11.23□□□□□ -0.61
SF3B4-202ENST00000457312 RHPN1-AS1Q9BWJ2 59 aa11.23□□□□□ -0.61
SF3B4-202ENST00000457312 MAGIXQ9H6Y5 334 aa11.23□□□□□ -0.61
SF3B4-202ENST00000457312 TCRBV5S2A0A599 114 aa11.22□□□□□ -0.61
SF3B4-202ENST00000457312 E7EUB6 86 aa11.22□□□□□ -0.61
SF3B4-202ENST00000457312 CREBL2O60519 120 aaPredicted RBP11.22□□□□□ -0.61
SF3B4-202ENST00000457312 IL6RP08887 468 aaPredicted RBP11.22□□□□□ -0.61
SF3B4-202ENST00000457312 HIST1H1BP16401 226 aaKnown RBP11.22□□□□□ -0.61
SF3B4-202ENST00000457312 FAM222AQ5U5X8 452 aa11.22□□□□□ -0.61
SF3B4-202ENST00000457312 CGB2Q6NT52 195 aa11.22□□□□□ -0.61
SF3B4-202ENST00000457312 MMD2Q8IY49 270 aa11.22□□□□□ -0.61
SF3B4-202ENST00000457312 Q9H8V8 135 aa11.22□□□□□ -0.61
SF3B4-202ENST00000457312 V9GYY5 206 aaPredicted RBP11.22□□□□□ -0.61
SF3B4-202ENST00000457312 IGHV7-4-1A0A0J9YVY3 117 aa11.21□□□□□ -0.61
SF3B4-202ENST00000457312 TEX48A0A1B0GUV7 120 aa11.21□□□□□ -0.61
SF3B4-202ENST00000457312 DHFRP00374 187 aa11.21□□□□□ -0.61
SF3B4-202ENST00000457312 CEACAM6P40199 344 aa11.21□□□□□ -0.61
SF3B4-202ENST00000457312 CCL18P55774 89 aa11.21□□□□□ -0.61
SF3B4-202ENST00000457312 OXA1LQ15070 435 aa11.21□□□□□ -0.61
SF3B4-202ENST00000457312 CDK10Q15131 360 aa11.21□□□□□ -0.61
SF3B4-202ENST00000457312 RTL8BQ17RB0 113 aa11.21□□□□□ -0.61
SF3B4-202ENST00000457312 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.21□□□□□ -0.61
SF3B4-202ENST00000457312 C5orf30Q96GV9 206 aa11.21□□□□□ -0.61
SF3B4-202ENST00000457312 PRRG3Q9BZD7 231 aa11.21□□□□□ -0.61
SF3B4-202ENST00000457312 IGHV3-49A0A0A0MS15 119 aa11.2□□□□□ -0.62
SF3B4-202ENST00000457312 TMEM189A5PLL7 270 aa11.2□□□□□ -0.62
SF3B4-202ENST00000457312 OR2T8A6NH00 312 aa11.2□□□□□ -0.62
SF3B4-202ENST00000457312 C15orf62A8K5M9 175 aa11.2□□□□□ -0.62
SF3B4-202ENST00000457312 EREGO14944 169 aa11.2□□□□□ -0.62
SF3B4-202ENST00000457312 PDCD6O75340 191 aa11.2□□□□□ -0.62
SF3B4-202ENST00000457312 REG1AP05451 166 aa11.2□□□□□ -0.62
SF3B4-202ENST00000457312 ERVFC1-1P60608 527 aa11.2□□□□□ -0.62
SF3B4-202ENST00000457312 IL4I1Q96RQ9 567 aa11.2□□□□□ -0.62
SF3B4-202ENST00000457312 BANF2Q9H503 90 aa11.2□□□□□ -0.62
SF3B4-202ENST00000457312 A0A1W2PPQ1 181 aa11.19□□□□□ -0.62
SF3B4-202ENST00000457312 KNCNA6PVL3 124 aa11.19□□□□□ -0.62
SF3B4-202ENST00000457312 SLC16A6O15403 523 aa11.19□□□□□ -0.62
SF3B4-202ENST00000457312 CRYZL1O95825 349 aa11.19□□□□□ -0.62
SF3B4-202ENST00000457312 PRKACGP22612 351 aa11.19□□□□□ -0.62
SF3B4-202ENST00000457312 GCSHP23434 173 aa11.19□□□□□ -0.62
SF3B4-202ENST00000457312 LINC00315P59091 139 aa11.19□□□□□ -0.62
SF3B4-202ENST00000457312 GPR176Q14439 515 aa11.19□□□□□ -0.62
SF3B4-202ENST00000457312 USF2Q15853 346 aaPredicted RBP11.19□□□□□ -0.62
SF3B4-202ENST00000457312 ZNF880Q6PDB4 577 aa11.19□□□□□ -0.62
SF3B4-202ENST00000457312 MFSD4AQ8N468 514 aa11.19□□□□□ -0.62
SF3B4-202ENST00000457312 TMEM116Q8NCL8 245 aa11.19□□□□□ -0.62
SF3B4-202ENST00000457312 ZNF414Q96IQ9 312 aa11.19□□□□□ -0.62
SF3B4-202ENST00000457312 Q96M66 194 aa11.19□□□□□ -0.62
SF3B4-202ENST00000457312 CMTM3Q96MX0 182 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms