RNA–Protein interactions for RNA: ENST00000457264.5

MRPL55-222, Transcript of mitochondrial ribosomal protein L55, human

TSL 3

Gene MRPL55, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-222	ENST00000457264	DUT	P33316	252 aa	Known RBP	12.57	□□□□□ -0.4
MRPL55-222	ENST00000457264	MMD2	Q8IY49	270 aa		12.57	□□□□□ -0.4
MRPL55-222	ENST00000457264	LINC00476	Q8WZB0	136 aa		12.57	□□□□□ -0.4
MRPL55-222	ENST00000457264	DDB2	Q92466	427 aa		12.57	□□□□□ -0.4
MRPL55-222	ENST00000457264	WDR89	Q96FK6	387 aa	Predicted RBP	12.57	□□□□□ -0.4
MRPL55-222	ENST00000457264	CENPO	Q9BU64	300 aa		12.57	□□□□□ -0.4
MRPL55-222	ENST00000457264	LINC00473	A8K010	186 aa		12.56	□□□□□ -0.4
MRPL55-222	ENST00000457264	LGALS9	O00182	355 aa		12.56	□□□□□ -0.4
MRPL55-222	ENST00000457264	LY6G6C	O95867	125 aa		12.56	□□□□□ -0.4
MRPL55-222	ENST00000457264	HLA-A	P01891	365 aa	Known RBP	12.56	□□□□□ -0.4
MRPL55-222	ENST00000457264	CBLN1	P23435	193 aa		12.56	□□□□□ -0.4
MRPL55-222	ENST00000457264	PSMD7	P51665	324 aa		12.56	□□□□□ -0.4
MRPL55-222	ENST00000457264	CDK10	Q15131	360 aa		12.56	□□□□□ -0.4
MRPL55-222	ENST00000457264	TRAM1	Q15629	374 aa		12.56	□□□□□ -0.4
MRPL55-222	ENST00000457264	TMEM91	Q6ZNR0	172 aa		12.56	□□□□□ -0.4
MRPL55-222	ENST00000457264	MAFIP	Q8WZ33	124 aa		12.56	□□□□□ -0.4
MRPL55-222	ENST00000457264	SCN3B	Q9NY72	215 aa		12.56	□□□□□ -0.4
MRPL55-222	ENST00000457264	TMEM272	A0A1B0GTI8	110 aa		12.55	□□□□□ -0.4
MRPL55-222	ENST00000457264	HSMCR30	P0CW71	290 aa		12.55	□□□□□ -0.4
MRPL55-222	ENST00000457264	SAA1	P0DJI8	122 aa	Predicted RBP	12.55	□□□□□ -0.4
MRPL55-222	ENST00000457264	EDN2	P20800	178 aa		12.55	□□□□□ -0.4
MRPL55-222	ENST00000457264	GADD45A	P24522	165 aa		12.55	□□□□□ -0.4
MRPL55-222	ENST00000457264	MAP2K4	P45985	399 aa		12.55	□□□□□ -0.4
MRPL55-222	ENST00000457264	GPHB5	Q86YW7	130 aa		12.55	□□□□□ -0.4
MRPL55-222	ENST00000457264	GGTLC1	Q9BX51	225 aa		12.55	□□□□□ -0.4
MRPL55-222	ENST00000457264	FBXL7	Q9UJT9	491 aa		12.55	□□□□□ -0.4
MRPL55-222	ENST00000457264	ZNF257	Q9Y2Q1	563 aa		12.55	□□□□□ -0.4
MRPL55-222	ENST00000457264		V9GY05	133 aa		12.55	□□□□□ -0.4
MRPL55-222	ENST00000457264		A0A075B6Q4	140 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	ZNF320	A2RRD8	509 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	DPPA5	A6NC42	116 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	CXorf65	A6NEN9	183 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	FCGR3B	O75015	233 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	GNB3	P16520	340 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	PSMA1	P25786	263 aa	Known RBP	12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	CALR	P27797	417 aa	Known RBP	12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	TALDO1	P37837	337 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	RPS25	P62851	125 aa	Known RBP	12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	PLA2G7	Q13093	441 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	ANKRD55	Q3KP44	614 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	FAM106A	Q4KMX7	169 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	C10orf55	Q5SWW7	151 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	ZNF57	Q68EA5	555 aa	Predicted RBP	12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	OR52B4	Q8NGK2	314 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	OR10R2	Q8NGX6	335 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	ST6GALNAC5	Q9BVH7	336 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	PRELID3B	Q9Y3B1	194 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	DMRT1	Q9Y5R6	373 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	SELENOK	Q9Y6D0	94 aa		12.54	□□□□□ -0.4
MRPL55-222	ENST00000457264	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	12.53	□□□□□ -0.4
MRPL55-222	ENST00000457264	HMX3	A6NHT5	357 aa		12.53	□□□□□ -0.4
MRPL55-222	ENST00000457264	EBAG9	O00559	213 aa		12.53	□□□□□ -0.4
MRPL55-222	ENST00000457264	ARL3	P36405	182 aa		12.53	□□□□□ -0.4
MRPL55-222	ENST00000457264	ARFRP1	Q13795	201 aa		12.53	□□□□□ -0.4
MRPL55-222	ENST00000457264	HES5	Q5TA89	166 aa		12.53	□□□□□ -0.4
MRPL55-222	ENST00000457264	H1FOO	Q8IZA3	346 aa	Predicted RBP	12.53	□□□□□ -0.4
MRPL55-222	ENST00000457264	TMEM61	Q8N0U2	210 aa		12.53	□□□□□ -0.4
MRPL55-222	ENST00000457264	CACNG8	Q8WXS5	425 aa		12.53	□□□□□ -0.4
MRPL55-222	ENST00000457264	OVOL2	Q9BRP0	275 aa		12.53	□□□□□ -0.4
MRPL55-222	ENST00000457264	OR51E2	Q9H255	320 aa		12.53	□□□□□ -0.4
MRPL55-222	ENST00000457264		J3QRK9	145 aa		12.52	□□□□□ -0.41
MRPL55-222	ENST00000457264	IGHV3-23	P01764	117 aa		12.52	□□□□□ -0.41
MRPL55-222	ENST00000457264	PMS2P11	Q13670	270 aa		12.52	□□□□□ -0.41
MRPL55-222	ENST00000457264	IRF3	Q14653	427 aa		12.52	□□□□□ -0.41
MRPL55-222	ENST00000457264	RCN1	Q15293	331 aa		12.52	□□□□□ -0.41
MRPL55-222	ENST00000457264	CLEC19A	Q6UXS0	136 aa		12.52	□□□□□ -0.41
MRPL55-222	ENST00000457264	ZNF645	Q8N7E2	425 aa		12.52	□□□□□ -0.41
MRPL55-222	ENST00000457264	VCX	Q9H320	206 aa		12.52	□□□□□ -0.41
MRPL55-222	ENST00000457264	MRPS7	Q9Y2R9	242 aa	Known RBP	12.52	□□□□□ -0.41
MRPL55-222	ENST00000457264	NUPR2	A6NF83	97 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	NPIPB5	A8MRT5	1133 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	MFNG	O00587	321 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	SCAF4	O95104	1147 aa	Known RBP	12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	DHFR	P00374	187 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	HIST1H1D	P16402	221 aa	Known RBP	12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	CD36	P16671	472 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	FABP5	Q01469	135 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	OR2B11	Q5JQS5	317 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	OGFRL1	Q5TC84	451 aa	Predicted RBP	12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	OR4A47	Q6IF82	309 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264		Q6ZS49	121 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	KCTD9	Q7L273	389 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	VKORC1L1	Q8N0U8	176 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	UXS1	Q8NBZ7	420 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	VSTM2A	Q8TAG5	236 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	FYTTD1	Q96QD9	318 aa	Known RBP	12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	ACOT13	Q9NPJ3	140 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	SLC2A9	Q9NRM0	540 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	MLX	Q9UH92	298 aa		12.51	□□□□□ -0.41
MRPL55-222	ENST00000457264	PLEC	Q15149	4684 aa	Known RBP	12.5	□□□□□ -0.41
MRPL55-222	ENST00000457264	METTL21EP	A6NDL7	271 aa		12.5	□□□□□ -0.41
MRPL55-222	ENST00000457264	TEX22	C9J3V5	150 aa		12.5	□□□□□ -0.41
MRPL55-222	ENST00000457264	RAB27B	O00194	218 aa		12.5	□□□□□ -0.41
MRPL55-222	ENST00000457264	SLC22A5	O76082	557 aa		12.5	□□□□□ -0.41
MRPL55-222	ENST00000457264	NDUFB8	O95169	186 aa		12.5	□□□□□ -0.41
MRPL55-222	ENST00000457264	IL6R	P08887	468 aa	Predicted RBP	12.5	□□□□□ -0.41
MRPL55-222	ENST00000457264	RPL27A	P46776	148 aa	Known RBP	12.5	□□□□□ -0.41
MRPL55-222	ENST00000457264	C19orf35	Q6ZS72	473 aa		12.5	□□□□□ -0.41
MRPL55-222	ENST00000457264	EEF1AKMT3	Q96AZ1	226 aa		12.5	□□□□□ -0.41
MRPL55-222	ENST00000457264	CCDC140	Q96MF4	163 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms