RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 MARCH1Q8TCQ1 289 aa11.14□□□□□ -0.63
SMPD4-215ENST00000457039 NOL4LQ96MY1 436 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-215ENST00000457039 OR51J1Q9H342 316 aa11.14□□□□□ -0.63
SMPD4-215ENST00000457039 FAM212BQ9NTI7 297 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-215ENST00000457039 AP4M1O00189 453 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 HPRT1P00492 218 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 CTSDP07339 412 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-215ENST00000457039 SAA1P0DJI8 122 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-215ENST00000457039 IL7P13232 177 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 FAUP35544 74 aaKnown RBP11.13□□□□□ -0.63
SMPD4-215ENST00000457039 CX3CL1P78423 397 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 POU2AF1Q16633 256 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 VMA21Q3ZAQ7 101 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 ZNF585BQ52M93 769 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 TRIQKQ629K1 86 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 SHISA2Q6UWI4 295 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 FOXRED2Q8IWF2 684 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 PUSL1Q8N0Z8 303 aaKnown RBP11.13□□□□□ -0.63
SMPD4-215ENST00000457039 STPG2Q8N412 459 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 TCTEX1D1Q8N7M0 179 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 ZFAND1Q8TCF1 268 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 CD300LFQ8TDQ1 290 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 S100ZQ8WXG8 99 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 RTBDNQ9BSG5 229 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-215ENST00000457039 C5orf66Q9H5L9 145 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 PLEKHA2Q9HB19 425 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 MCUBQ9NWR8 336 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 LINC00527Q9UJ94 153 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 SCP2D1Q9UJQ7 156 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 GPR132Q9UNW8 380 aa11.13□□□□□ -0.63
SMPD4-215ENST00000457039 MPPED1O15442 326 aa11.12□□□□□ -0.63
SMPD4-215ENST00000457039 CA2P00918 260 aa11.12□□□□□ -0.63
SMPD4-215ENST00000457039 S100GP29377 79 aa11.12□□□□□ -0.63
SMPD4-215ENST00000457039 CRIP2P52943 208 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-215ENST00000457039 PIGPP57054 158 aa11.12□□□□□ -0.63
SMPD4-215ENST00000457039 TAS2R31P59538 309 aa11.12□□□□□ -0.63
SMPD4-215ENST00000457039 CFHR3Q02985 330 aa11.12□□□□□ -0.63
SMPD4-215ENST00000457039 PJVKQ0ZLH3 352 aa11.12□□□□□ -0.63
SMPD4-215ENST00000457039 PLGLAQ15195 96 aa11.12□□□□□ -0.63
SMPD4-215ENST00000457039 ZNF57Q68EA5 555 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-215ENST00000457039 C10orf99Q6UWK7 81 aa11.12□□□□□ -0.63
SMPD4-215ENST00000457039 ZNF562Q6V9R5 426 aa11.12□□□□□ -0.63
SMPD4-215ENST00000457039 VKORC1L1Q8N0U8 176 aa11.12□□□□□ -0.63
SMPD4-215ENST00000457039 POC5Q8NA72 575 aa11.12□□□□□ -0.63
SMPD4-215ENST00000457039 CHPT1Q8WUD6 406 aa11.12□□□□□ -0.63
SMPD4-215ENST00000457039 CLCC1Q96S66 551 aa11.12□□□□□ -0.63
SMPD4-215ENST00000457039 FBXO7Q9Y3I1 522 aa11.12□□□□□ -0.63
SMPD4-215ENST00000457039 ARPC1BO15143 372 aaKnown RBP11.11□□□□□ -0.63
SMPD4-215ENST00000457039 ATP6V0E1O15342 81 aa11.11□□□□□ -0.63
SMPD4-215ENST00000457039 S1PR2O95136 353 aa11.11□□□□□ -0.63
SMPD4-215ENST00000457039 HRASP01112 189 aa11.11□□□□□ -0.63
SMPD4-215ENST00000457039 IL6RP08887 468 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-215ENST00000457039 EGR2P11161 476 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-215ENST00000457039 PRSS8Q16651 343 aa11.11□□□□□ -0.63
SMPD4-215ENST00000457039 CENPVQ7Z7K6 275 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-215ENST00000457039 TMEM167AQ8TBQ9 72 aa11.11□□□□□ -0.63
SMPD4-215ENST00000457039 RHOVQ96L33 236 aa11.11□□□□□ -0.63
SMPD4-215ENST00000457039 CCDC32Q9BV29 185 aa11.11□□□□□ -0.63
SMPD4-215ENST00000457039 COMMD9Q9P000 198 aa11.11□□□□□ -0.63
SMPD4-215ENST00000457039 VSIG4Q9Y279 399 aa11.11□□□□□ -0.63
SMPD4-215ENST00000457039 PLXNB1O43157 2135 aa11.11□□□□□ -0.63
SMPD4-215ENST00000457039 PSMB11A5LHX3 300 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 NAP1L6A6NFF2 107 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 KBTBD11O94819 623 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 OR2A4O95047 310 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 CD28P10747 220 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 NQO2P16083 231 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 CD40LGP29965 261 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 LPAR6P43657 344 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 C19orf54Q5BKX5 351 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 TCTEX1D4Q5JR98 221 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 ZNF329Q86UD4 541 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 CCDC71LQ8N9Z2 235 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 OR5AU1Q8NGC0 362 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 VSTM2AQ8TAG5 236 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 OR2A7Q96R45 310 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 ZNF430Q9H8G1 570 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-215ENST00000457039 PARP11Q9NR21 331 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 BET1LQ9NYM9 111 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 COPZ2Q9P299 210 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 C14orf166Q9Y224 244 aaKnown RBP11.1□□□□□ -0.63
SMPD4-215ENST00000457039 TRRAPQ9Y4A5 3859 aa11.1□□□□□ -0.63
SMPD4-215ENST00000457039 G3V318 75 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 H0Y980 276 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 PLA2G10O15496 165 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 FBXO24O75426 580 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 IGKV1-39P01597 117 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 IGKV1D-39P04432 117 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 PPIFP30405 207 aaKnown RBP11.09□□□□□ -0.63
SMPD4-215ENST00000457039 BTCP35070 178 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 INPP1P49441 399 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 CD83Q01151 205 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 FXYD3Q14802 87 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 HIST2H2BDQ6DRA6 164 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 OR4A47Q6IF82 309 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 MMD2Q8IY49 270 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 CADM3Q8N126 398 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 C11orf44Q8N8P7 122 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 SGMS2Q8NHU3 365 aa11.09□□□□□ -0.63
SMPD4-215ENST00000457039 ARPC1AQ92747 370 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms