RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 CCL28Q9NRJ3 127 aa18.09■□□□□ 0.49
CBX3-204ENST00000456948 ZMAT5Q9UDW3 170 aaKnown RBP18.09■□□□□ 0.49
CBX3-204ENST00000456948 ANAPC10Q9UM13 185 aa18.09■□□□□ 0.49
CBX3-204ENST00000456948 FBXO7Q9Y3I1 522 aa18.09■□□□□ 0.49
CBX3-204ENST00000456948 SRRM4A7MD48 611 aaKnown RBP18.08■□□□□ 0.48
CBX3-204ENST00000456948 PMP2P02689 132 aa18.08■□□□□ 0.48
CBX3-204ENST00000456948 S100GP29377 79 aa18.08■□□□□ 0.48
CBX3-204ENST00000456948 RCVRNP35243 200 aa18.08■□□□□ 0.48
CBX3-204ENST00000456948 RFX2P48378 723 aa18.08■□□□□ 0.48
CBX3-204ENST00000456948 TSPAN5P62079 268 aa18.08■□□□□ 0.48
CBX3-204ENST00000456948 OR2B11Q5JQS5 317 aa18.08■□□□□ 0.48
CBX3-204ENST00000456948 MMD2Q8IY49 270 aa18.08■□□□□ 0.48
CBX3-204ENST00000456948 MYOZ3Q8TDC0 251 aa18.08■□□□□ 0.48
CBX3-204ENST00000456948 P2RX4Q99571 388 aa18.08■□□□□ 0.48
CBX3-204ENST00000456948 KLK15Q9H2R5 256 aa18.08■□□□□ 0.48
CBX3-204ENST00000456948 TPSG1Q9NRR2 321 aa18.08■□□□□ 0.48
CBX3-204ENST00000456948 ZNF355PQ9NSJ1 428 aa18.08■□□□□ 0.48
CBX3-204ENST00000456948 SCOCQ9UIL1 159 aa18.08■□□□□ 0.48
CBX3-204ENST00000456948 RGS5O15539 181 aa18.07■□□□□ 0.48
CBX3-204ENST00000456948 EGR2P11161 476 aaPredicted RBP18.07■□□□□ 0.48
CBX3-204ENST00000456948 RPL30P62888 115 aaKnown RBP18.07■□□□□ 0.48
CBX3-204ENST00000456948 PRSS8Q16651 343 aa18.07■□□□□ 0.48
CBX3-204ENST00000456948 C19orf54Q5BKX5 351 aa18.07■□□□□ 0.48
CBX3-204ENST00000456948 ETV3LQ6ZN32 361 aa18.07■□□□□ 0.48
CBX3-204ENST00000456948 TMEM17Q86X19 198 aa18.07■□□□□ 0.48
CBX3-204ENST00000456948 CMTM1Q8IZ96 169 aa18.07■□□□□ 0.48
CBX3-204ENST00000456948 CD300LFQ8TDQ1 290 aa18.07■□□□□ 0.48
CBX3-204ENST00000456948 RAX2Q96IS3 184 aa18.07■□□□□ 0.48
CBX3-204ENST00000456948 ZNF2Q9BSG1 426 aaPredicted RBP18.07■□□□□ 0.48
CBX3-204ENST00000456948 EXTL2Q9UBQ6 330 aa18.07■□□□□ 0.48
CBX3-204ENST00000456948 H3BUA1 57 aa18.06■□□□□ 0.48
CBX3-204ENST00000456948 MPPED1O15442 326 aa18.06■□□□□ 0.48
CBX3-204ENST00000456948 HLA-DMAP28067 261 aa18.06■□□□□ 0.48
CBX3-204ENST00000456948 RUNX1Q01196 453 aa18.06■□□□□ 0.48
CBX3-204ENST00000456948 PJVKQ0ZLH3 352 aa18.06■□□□□ 0.48
CBX3-204ENST00000456948 TNXAQ16473 311 aa18.06■□□□□ 0.48
CBX3-204ENST00000456948 LPCAT3Q6P1A2 487 aa18.06■□□□□ 0.48
CBX3-204ENST00000456948 ARPC1BO15143 372 aaKnown RBP18.05■□□□□ 0.48
CBX3-204ENST00000456948 TNFSF12O43508 249 aa18.05■□□□□ 0.48
CBX3-204ENST00000456948 OR8U8P0C7N1 319 aa18.05■□□□□ 0.48
CBX3-204ENST00000456948 HRH1P35367 487 aa18.05■□□□□ 0.48
CBX3-204ENST00000456948 TPPP2P59282 170 aa18.05■□□□□ 0.48
CBX3-204ENST00000456948 SPAG16Q8N0X2 631 aa18.05■□□□□ 0.48
CBX3-204ENST00000456948 OR11H1Q8NG94 326 aa18.05■□□□□ 0.48
CBX3-204ENST00000456948 OR1N2Q8NGR9 330 aa18.05■□□□□ 0.48
CBX3-204ENST00000456948 SPIN2AQ99865 258 aa18.05■□□□□ 0.48
CBX3-204ENST00000456948 SPIN2BQ9BPZ2 258 aa18.05■□□□□ 0.48
CBX3-204ENST00000456948 A0A0G2JLM5 398 aa18.04■□□□□ 0.48
CBX3-204ENST00000456948 RBFOX2O43251 390 aaKnown RBP eCLIP18.04■□□□□ 0.48
CBX3-204ENST00000456948 OR2A4O95047 310 aa18.04■□□□□ 0.48
CBX3-204ENST00000456948 SAA1P0DJI8 122 aaPredicted RBP18.04■□□□□ 0.48
CBX3-204ENST00000456948 EIF4EBP1Q13541 118 aaPredicted RBP18.04■□□□□ 0.48
CBX3-204ENST00000456948 DEFB136Q30KP8 78 aa18.04■□□□□ 0.48
CBX3-204ENST00000456948 AADACL3Q5VUY0 350 aa18.04■□□□□ 0.48
CBX3-204ENST00000456948 IDO2Q6ZQW0 420 aa18.04■□□□□ 0.48
CBX3-204ENST00000456948 LYSMD2Q8IV50 215 aa18.04■□□□□ 0.48
CBX3-204ENST00000456948 MOB3AQ96BX8 217 aa18.04■□□□□ 0.48
CBX3-204ENST00000456948 OR2A7Q96R45 310 aa18.04■□□□□ 0.48
CBX3-204ENST00000456948 RABL2AQ9UBK7 228 aaPredicted RBP18.04■□□□□ 0.48
CBX3-204ENST00000456948 RABL2BQ9UNT1 228 aa18.04■□□□□ 0.48
CBX3-204ENST00000456948 MSGN1A6NI15 193 aa18.03■□□□□ 0.48
CBX3-204ENST00000456948 SOX15O60248 233 aa18.03■□□□□ 0.48
CBX3-204ENST00000456948 TRGV3P03979 118 aa18.03■□□□□ 0.48
CBX3-204ENST00000456948 IFNA6P05013 189 aa18.03■□□□□ 0.48
CBX3-204ENST00000456948 ZNF616Q08AN1 781 aa18.03■□□□□ 0.48
CBX3-204ENST00000456948 KIAA0141Q14154 515 aaPredicted RBP18.03■□□□□ 0.48
CBX3-204ENST00000456948 SPCS2Q15005 226 aa18.03■□□□□ 0.48
CBX3-204ENST00000456948 OR5T1Q8NG75 326 aa18.03■□□□□ 0.48
CBX3-204ENST00000456948 FCAMRQ8WWV6 532 aa18.03■□□□□ 0.48
CBX3-204ENST00000456948 RHOVQ96L33 236 aa18.03■□□□□ 0.48
CBX3-204ENST00000456948 MS4A10Q96PG2 267 aa18.03■□□□□ 0.48
CBX3-204ENST00000456948 DUX3Q96PT4 197 aa18.03■□□□□ 0.48
CBX3-204ENST00000456948 GNB4Q9HAV0 340 aa18.03■□□□□ 0.48
CBX3-204ENST00000456948 C13orf42A0A1B0GVH6 325 aa18.02■□□□□ 0.48
CBX3-204ENST00000456948 HPRT1P00492 218 aa18.02■□□□□ 0.48
CBX3-204ENST00000456948 MAS1LP35410 378 aa18.02■□□□□ 0.48
CBX3-204ENST00000456948 FOXB2Q5VYV0 432 aa18.02■□□□□ 0.48
CBX3-204ENST00000456948 ZNF818PQ6ZRF7 136 aa18.02■□□□□ 0.48
CBX3-204ENST00000456948 SRSF12Q8WXF0 261 aaKnown RBP18.02■□□□□ 0.48
CBX3-204ENST00000456948 OR5B12Q96R08 314 aa18.02■□□□□ 0.48
CBX3-204ENST00000456948 ZNF430Q9H8G1 570 aaPredicted RBP18.02■□□□□ 0.48
CBX3-204ENST00000456948 CCDC59Q9P031 241 aaKnown RBP18.02■□□□□ 0.48
CBX3-204ENST00000456948 I3L521 148 aa18.01■□□□□ 0.47
CBX3-204ENST00000456948 GNRHRP30968 328 aa18.01■□□□□ 0.47
CBX3-204ENST00000456948 TAS2R31P59538 309 aa18.01■□□□□ 0.47
CBX3-204ENST00000456948 MRPS10P82664 201 aaKnown RBP18.01■□□□□ 0.47
CBX3-204ENST00000456948 SLC25A42Q86VD7 318 aa18.01■□□□□ 0.47
CBX3-204ENST00000456948 OR4A5Q8NH83 315 aa18.01■□□□□ 0.47
CBX3-204ENST00000456948 COA4Q9NYJ1 87 aa18.01■□□□□ 0.47
CBX3-204ENST00000456948 TNCP24821 2201 aa18■□□□□ 0.47
CBX3-204ENST00000456948 GPR31O00270 319 aa18■□□□□ 0.47
CBX3-204ENST00000456948 KBTBD11O94819 623 aa18■□□□□ 0.47
CBX3-204ENST00000456948 BRI3O95415 125 aa18■□□□□ 0.47
CBX3-204ENST00000456948 LGALS1P09382 135 aaKnown RBP18■□□□□ 0.47
CBX3-204ENST00000456948 NQO2P16083 231 aa18■□□□□ 0.47
CBX3-204ENST00000456948 TBPP20226 339 aa18■□□□□ 0.47
CBX3-204ENST00000456948 OR51H1Q8NH63 302 aa18■□□□□ 0.47
CBX3-204ENST00000456948 CASTOR1Q8WTX7 329 aa18■□□□□ 0.47
CBX3-204ENST00000456948 PLEKHA2Q9HB19 425 aa18■□□□□ 0.47
CBX3-204ENST00000456948 SSBP2P81877 361 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms