RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 H3BUA1 57 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 PPYP01298 95 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 IGLV2-14P01704 120 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 APELAP0DMC3 54 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 SLURP1P55000 103 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 CDK10Q15131 360 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 OVCH2Q7RTZ1 564 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 DCUN1D4Q92564 292 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 SNAPC3Q92966 411 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 SLC5A7Q9GZV3 580 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 CCL28Q9NRJ3 127 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 COMMD3Q9UBI1 195 aa12.56□□□□□ -0.4
CPSF6-203ENST00000456847 DNAH3Q8TD57 4116 aa12.55□□□□□ -0.4
CPSF6-203ENST00000456847 OVOL1O14753 267 aa12.55□□□□□ -0.4
CPSF6-203ENST00000456847 TNFSF12O43508 249 aa12.55□□□□□ -0.4
CPSF6-203ENST00000456847 RAMP3O60896 148 aa12.55□□□□□ -0.4
CPSF6-203ENST00000456847 HERV-K104P61576 105 aa12.55□□□□□ -0.4
CPSF6-203ENST00000456847 ZNF66Q6ZN08 573 aa12.55□□□□□ -0.4
CPSF6-203ENST00000456847 OR5AP2Q8NGF4 316 aa12.55□□□□□ -0.4
CPSF6-203ENST00000456847 SRSF12Q8WXF0 261 aaKnown RBP12.55□□□□□ -0.4
CPSF6-203ENST00000456847 SMIM18P0DKX4 95 aa12.54□□□□□ -0.4
CPSF6-203ENST00000456847 ECI1P42126 302 aa12.54□□□□□ -0.4
CPSF6-203ENST00000456847 MMD2Q8IY49 270 aa12.54□□□□□ -0.4
CPSF6-203ENST00000456847 MFSD4AQ8N468 514 aa12.54□□□□□ -0.4
CPSF6-203ENST00000456847 GPHA2Q96T91 129 aa12.54□□□□□ -0.4
CPSF6-203ENST00000456847 ZNF430Q9H8G1 570 aaPredicted RBP12.54□□□□□ -0.4
CPSF6-203ENST00000456847 EHFQ9NZC4 300 aa12.54□□□□□ -0.4
CPSF6-203ENST00000456847 MSGN1A6NI15 193 aa12.54□□□□□ -0.4
CPSF6-203ENST00000456847 HSPB1P04792 205 aaKnown RBP12.54□□□□□ -0.4
CPSF6-203ENST00000456847 EIF4EP06730 217 aaKnown RBP12.54□□□□□ -0.4
CPSF6-203ENST00000456847 KIR2DS2P43631 304 aa12.54□□□□□ -0.4
CPSF6-203ENST00000456847 TMEM17Q86X19 198 aa12.54□□□□□ -0.4
CPSF6-203ENST00000456847 RHOVQ96L33 236 aa12.54□□□□□ -0.4
CPSF6-203ENST00000456847 A0A0G2JLM5 398 aa12.53□□□□□ -0.4
CPSF6-203ENST00000456847 PRSS3P35030 304 aa12.53□□□□□ -0.4
CPSF6-203ENST00000456847 DEFA5Q01523 94 aa12.53□□□□□ -0.4
CPSF6-203ENST00000456847 CATR1Q13166 79 aa12.53□□□□□ -0.4
CPSF6-203ENST00000456847 EIF4EBP1Q13541 118 aaPredicted RBP12.53□□□□□ -0.4
CPSF6-203ENST00000456847 DCTN2Q13561 401 aaKnown RBP12.53□□□□□ -0.4
CPSF6-203ENST00000456847 MSMO1Q15800 293 aa12.53□□□□□ -0.4
CPSF6-203ENST00000456847 MRGPRG-AS1Q2M3A8 158 aa12.53□□□□□ -0.4
CPSF6-203ENST00000456847 VKORC1L1Q8N0U8 176 aa12.53□□□□□ -0.4
CPSF6-203ENST00000456847 ZBTB34Q8NCN2 500 aa12.53□□□□□ -0.4
CPSF6-203ENST00000456847 VSTM2AQ8TAG5 236 aa12.53□□□□□ -0.4
CPSF6-203ENST00000456847 DLX4Q92988 240 aaPredicted RBP12.53□□□□□ -0.4
CPSF6-203ENST00000456847 SMIM31A0A1B0GVY4 71 aa12.52□□□□□ -0.4
CPSF6-203ENST00000456847 SAP30O75446 220 aa12.52□□□□□ -0.4
CPSF6-203ENST00000456847 OR5H2Q8NGV7 314 aa12.52□□□□□ -0.4
CPSF6-203ENST00000456847 PRR25Q96S07 402 aa12.52□□□□□ -0.4
CPSF6-203ENST00000456847 TINAGL1Q9GZM7 467 aaPredicted RBP12.52□□□□□ -0.4
CPSF6-203ENST00000456847 OR2A4O95047 310 aa12.52□□□□□ -0.41
CPSF6-203ENST00000456847 LY86O95711 162 aa12.52□□□□□ -0.41
CPSF6-203ENST00000456847 PMP2P02689 132 aa12.52□□□□□ -0.41
CPSF6-203ENST00000456847 OR9G9P0C7N8 305 aa12.52□□□□□ -0.41
CPSF6-203ENST00000456847 RORCP51449 518 aa12.52□□□□□ -0.41
CPSF6-203ENST00000456847 INSL3P51460 131 aa12.52□□□□□ -0.41
CPSF6-203ENST00000456847 TAS2R46P59540 309 aa12.52□□□□□ -0.41
CPSF6-203ENST00000456847 C10orf55Q5SWW7 151 aa12.52□□□□□ -0.41
CPSF6-203ENST00000456847 SSX9Q7RTT3 188 aa12.52□□□□□ -0.41
CPSF6-203ENST00000456847 GIMAP1Q8WWP7 306 aa12.52□□□□□ -0.41
CPSF6-203ENST00000456847 OR2A7Q96R45 310 aa12.52□□□□□ -0.41
CPSF6-203ENST00000456847 SPIN2AQ99865 258 aa12.52□□□□□ -0.41
CPSF6-203ENST00000456847 SPIN2BQ9BPZ2 258 aa12.52□□□□□ -0.41
CPSF6-203ENST00000456847 MRPS26Q9BYN8 205 aaKnown RBP12.52□□□□□ -0.41
CPSF6-203ENST00000456847 SCOCQ9UIL1 159 aa12.52□□□□□ -0.41
CPSF6-203ENST00000456847 ANKRD34BA5PLL1 514 aa12.51□□□□□ -0.41
CPSF6-203ENST00000456847 KBTBD11O94819 623 aa12.51□□□□□ -0.41
CPSF6-203ENST00000456847 HRASP01112 189 aa12.51□□□□□ -0.41
CPSF6-203ENST00000456847 APOA1P02647 267 aa12.51□□□□□ -0.41
CPSF6-203ENST00000456847 GPR107Q5VW38 600 aa12.51□□□□□ -0.41
CPSF6-203ENST00000456847 MZT2AQ6P582 158 aa12.51□□□□□ -0.41
CPSF6-203ENST00000456847 ANKRD13BQ86YJ7 626 aa12.51□□□□□ -0.41
CPSF6-203ENST00000456847 SPAG16Q8N0X2 631 aa12.51□□□□□ -0.41
CPSF6-203ENST00000456847 NAA50Q9GZZ1 169 aaKnown RBP12.51□□□□□ -0.41
CPSF6-203ENST00000456847 FAM25AB3EWG3 89 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 FAM25CB3EWG5 89 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 FAM25GB3EWG6 89 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 SULT1C2O00338 296 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 HPGDSO60760 199 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 GABARAPO95166 117 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 AADACL3Q5VUY0 350 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 ZNF818PQ6ZRF7 136 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 ZNF429Q86V71 674 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 SNX29P2Q8IUI4 249 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 ADAD2Q8NCV1 583 aaKnown RBP12.5□□□□□ -0.41
CPSF6-203ENST00000456847 OR51H1Q8NH63 302 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 BORCS5Q969J3 196 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 CMTM3Q96MX0 182 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 ZNF2Q9BSG1 426 aaPredicted RBP12.5□□□□□ -0.41
CPSF6-203ENST00000456847 RANGRFQ9HD47 186 aaPredicted RBP12.5□□□□□ -0.41
CPSF6-203ENST00000456847 ANAPC10Q9UM13 185 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 TNCP24821 2201 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 RFX2P48378 723 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 CD69Q07108 199 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 TMEM167AQ8TBQ9 72 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 AP3S1Q92572 193 aa12.5□□□□□ -0.41
CPSF6-203ENST00000456847 ZNF256Q9Y2P7 627 aaPredicted RBP12.5□□□□□ -0.41
CPSF6-203ENST00000456847 DPPA5A6NC42 116 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 ZP3P21754 424 aa12.49□□□□□ -0.41
CPSF6-203ENST00000456847 RPL27AP46776 148 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms