RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 DYNLRB2Q8TF09 96 aa12.62□□□□□ -0.39
TVP23A-202ENST00000456096 SRD5A3Q9H8P0 318 aa12.62□□□□□ -0.39
TVP23A-202ENST00000456096 IGKV1D-8A0A087WSZ0 117 aa12.61□□□□□ -0.39
TVP23A-202ENST00000456096 OR11H12B2RN74 326 aa12.61□□□□□ -0.39
TVP23A-202ENST00000456096 PPP5D1E7EU14 171 aa12.61□□□□□ -0.39
TVP23A-202ENST00000456096 MFNGO00587 321 aa12.61□□□□□ -0.39
TVP23A-202ENST00000456096 OR2J3O76001 311 aa12.61□□□□□ -0.39
TVP23A-202ENST00000456096 HLA-AP01891 365 aaKnown RBP12.61□□□□□ -0.39
TVP23A-202ENST00000456096 FOLR2P14207 255 aa12.61□□□□□ -0.39
TVP23A-202ENST00000456096 PSMA1P25786 263 aaKnown RBP12.61□□□□□ -0.39
TVP23A-202ENST00000456096 PSMD7P51665 324 aa12.61□□□□□ -0.39
TVP23A-202ENST00000456096 GUCA2BQ16661 112 aa12.61□□□□□ -0.39
TVP23A-202ENST00000456096 C10orf55Q5SWW7 151 aa12.61□□□□□ -0.39
TVP23A-202ENST00000456096 H1FOOQ8IZA3 346 aaPredicted RBP12.61□□□□□ -0.39
TVP23A-202ENST00000456096 TTC9CQ8N5M4 171 aa12.61□□□□□ -0.39
TVP23A-202ENST00000456096 KCTD12Q96CX2 325 aaKnown RBP12.61□□□□□ -0.39
TVP23A-202ENST00000456096 SPIN2AQ99865 258 aa12.61□□□□□ -0.39
TVP23A-202ENST00000456096 SPIN2BQ9BPZ2 258 aa12.61□□□□□ -0.39
TVP23A-202ENST00000456096 DUSP21Q9H596 190 aa12.61□□□□□ -0.39
TVP23A-202ENST00000456096 DMRT1Q9Y5R6 373 aa12.61□□□□□ -0.39
TVP23A-202ENST00000456096 C2orf70A6NJV1 201 aa12.6□□□□□ -0.39
TVP23A-202ENST00000456096 J3QRK9 145 aa12.6□□□□□ -0.39
TVP23A-202ENST00000456096 RAB27BO00194 218 aa12.6□□□□□ -0.39
TVP23A-202ENST00000456096 ACTL6BO94805 426 aa12.6□□□□□ -0.39
TVP23A-202ENST00000456096 OR2C1O95371 312 aa12.6□□□□□ -0.39
TVP23A-202ENST00000456096 SAA1P0DJI8 122 aaPredicted RBP12.6□□□□□ -0.39
TVP23A-202ENST00000456096 HIST1H1DP16402 221 aaKnown RBP12.6□□□□□ -0.39
TVP23A-202ENST00000456096 GADD45AP24522 165 aa12.6□□□□□ -0.39
TVP23A-202ENST00000456096 RANBP1P43487 201 aa12.6□□□□□ -0.39
TVP23A-202ENST00000456096 KIR2DS2P43631 304 aa12.6□□□□□ -0.39
TVP23A-202ENST00000456096 MLLT11Q13015 90 aaPredicted RBP12.6□□□□□ -0.39
TVP23A-202ENST00000456096 CDK10Q15131 360 aa12.6□□□□□ -0.39
TVP23A-202ENST00000456096 C15orf32Q32M92 178 aa12.6□□□□□ -0.39
TVP23A-202ENST00000456096 MMD2Q8IY49 270 aa12.6□□□□□ -0.39
TVP23A-202ENST00000456096 WDR89Q96FK6 387 aaPredicted RBP12.6□□□□□ -0.39
TVP23A-202ENST00000456096 DCUN1D5Q9BTE7 237 aa12.6□□□□□ -0.39
TVP23A-202ENST00000456096 VCXQ9H320 206 aa12.6□□□□□ -0.39
TVP23A-202ENST00000456096 TPRKBQ9Y3C4 175 aa12.6□□□□□ -0.39
TVP23A-202ENST00000456096 SELENOKQ9Y6D0 94 aa12.6□□□□□ -0.39
TVP23A-202ENST00000456096 FRAS1Q86XX4 4008 aa12.59□□□□□ -0.39
TVP23A-202ENST00000456096 HMX3A6NHT5 357 aa12.59□□□□□ -0.39
TVP23A-202ENST00000456096 RGS10O43665 173 aa12.59□□□□□ -0.39
TVP23A-202ENST00000456096 FCGR3BO75015 233 aa12.59□□□□□ -0.39
TVP23A-202ENST00000456096 TALDO1P37837 337 aa12.59□□□□□ -0.39
TVP23A-202ENST00000456096 OR10A3P58181 314 aa12.59□□□□□ -0.39
TVP23A-202ENST00000456096 ARFRP1Q13795 201 aa12.59□□□□□ -0.39
TVP23A-202ENST00000456096 C19orf35Q6ZS72 473 aa12.59□□□□□ -0.39
TVP23A-202ENST00000456096 ACOT13Q9NPJ3 140 aa12.59□□□□□ -0.39
TVP23A-202ENST00000456096 ZC4H2Q9NQZ6 224 aa12.59□□□□□ -0.39
TVP23A-202ENST00000456096 CREBL2O60519 120 aaPredicted RBP12.58□□□□□ -0.4
TVP23A-202ENST00000456096 GGCTO75223 188 aaKnown RBP12.58□□□□□ -0.4
TVP23A-202ENST00000456096 Q6ZS49 121 aa12.58□□□□□ -0.4
TVP23A-202ENST00000456096 VKORC1L1Q8N0U8 176 aa12.58□□□□□ -0.4
TVP23A-202ENST00000456096 CACNG8Q8WXS5 425 aa12.58□□□□□ -0.4
TVP23A-202ENST00000456096 MGLLQ99685 303 aa12.58□□□□□ -0.4
TVP23A-202ENST00000456096 CCDC90BQ9GZT6 254 aa12.58□□□□□ -0.4
TVP23A-202ENST00000456096 TECRQ9NZ01 308 aaKnown RBP12.58□□□□□ -0.4
TVP23A-202ENST00000456096 ELF5Q9UKW6 265 aaPredicted RBP12.58□□□□□ -0.4
TVP23A-202ENST00000456096 RAB6AP20340 208 aa12.57□□□□□ -0.4
TVP23A-202ENST00000456096 CBLN1P23435 193 aa12.57□□□□□ -0.4
TVP23A-202ENST00000456096 MAP2K4P45985 399 aa12.57□□□□□ -0.4
TVP23A-202ENST00000456096 RPL30P62888 115 aaKnown RBP12.57□□□□□ -0.4
TVP23A-202ENST00000456096 OR2B11Q5JQS5 317 aa12.57□□□□□ -0.4
TVP23A-202ENST00000456096 FAM209BQ5JX69 171 aa12.57□□□□□ -0.4
TVP23A-202ENST00000456096 SLC25A42Q86VD7 318 aa12.57□□□□□ -0.4
TVP23A-202ENST00000456096 ZNF645Q8N7E2 425 aa12.57□□□□□ -0.4
TVP23A-202ENST00000456096 CENPOQ9BU64 300 aa12.57□□□□□ -0.4
TVP23A-202ENST00000456096 OR51E2Q9H255 320 aa12.57□□□□□ -0.4
TVP23A-202ENST00000456096 FBXL7Q9UJT9 491 aa12.57□□□□□ -0.4
TVP23A-202ENST00000456096 ZNF257Q9Y2Q1 563 aa12.57□□□□□ -0.4
TVP23A-202ENST00000456096 IFITM5A6NNB3 132 aa12.56□□□□□ -0.4
TVP23A-202ENST00000456096 TEX22C9J3V5 150 aa12.56□□□□□ -0.4
TVP23A-202ENST00000456096 E7EUB6 86 aa12.56□□□□□ -0.4
TVP23A-202ENST00000456096 LGALS9O00182 355 aa12.56□□□□□ -0.4
TVP23A-202ENST00000456096 PDCD5O14737 125 aa12.56□□□□□ -0.4
TVP23A-202ENST00000456096 IGHV3-23P01764 117 aa12.56□□□□□ -0.4
TVP23A-202ENST00000456096 IL6RP08887 468 aaPredicted RBP12.56□□□□□ -0.4
TVP23A-202ENST00000456096 KCTD9Q7L273 389 aa12.56□□□□□ -0.4
TVP23A-202ENST00000456096 GPHB5Q86YW7 130 aa12.56□□□□□ -0.4
TVP23A-202ENST00000456096 RBMX2Q9Y388 322 aaKnown RBP12.56□□□□□ -0.4
TVP23A-202ENST00000456096 PRELID3BQ9Y3B1 194 aa12.56□□□□□ -0.4
TVP23A-202ENST00000456096 S4R3C0 116 aa12.56□□□□□ -0.4
TVP23A-202ENST00000456096 TRAV1-2A0A0B4J238 106 aa12.55□□□□□ -0.4
TVP23A-202ENST00000456096 DPPA5A6NC42 116 aa12.55□□□□□ -0.4
TVP23A-202ENST00000456096 METTL21EPA6NDL7 271 aa12.55□□□□□ -0.4
TVP23A-202ENST00000456096 ERICH4A6NGS2 130 aa12.55□□□□□ -0.4
TVP23A-202ENST00000456096 NDUFB8O95169 186 aa12.55□□□□□ -0.4
TVP23A-202ENST00000456096 IGLV2-14P01704 120 aa12.55□□□□□ -0.4
TVP23A-202ENST00000456096 HLA-DQB1P01920 261 aa12.55□□□□□ -0.4
TVP23A-202ENST00000456096 NFYAP23511 347 aaPredicted RBP12.55□□□□□ -0.4
TVP23A-202ENST00000456096 AQP4P55087 323 aa12.55□□□□□ -0.4
TVP23A-202ENST00000456096 CLEC19AQ6UXS0 136 aa12.55□□□□□ -0.4
TVP23A-202ENST00000456096 SLC16A13Q7RTY0 426 aa12.55□□□□□ -0.4
TVP23A-202ENST00000456096 PRSS48Q7RTY5 328 aa12.55□□□□□ -0.4
TVP23A-202ENST00000456096 TMEM61Q8N0U2 210 aa12.55□□□□□ -0.4
TVP23A-202ENST00000456096 FANCD2OSQ96PS1 177 aa12.55□□□□□ -0.4
TVP23A-202ENST00000456096 FYTTD1Q96QD9 318 aaKnown RBP12.55□□□□□ -0.4
TVP23A-202ENST00000456096 ST6GALNAC5Q9BVH7 336 aa12.55□□□□□ -0.4
TVP23A-202ENST00000456096 MRPS7Q9Y2R9 242 aaKnown RBP12.55□□□□□ -0.4
TVP23A-202ENST00000456096 OR2W1Q9Y3N9 320 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms