RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 FAM103A1Q9BTL3 118 aaKnown RBP5.55□□□□□ -1.52
COMMD1-205ENST00000455659 TINAGL1Q9GZM7 467 aaPredicted RBP5.55□□□□□ -1.52
COMMD1-205ENST00000455659 NXF2Q9GZY0 626 aaKnown RBP5.55□□□□□ -1.52
COMMD1-205ENST00000455659 KLK11Q9UBX7 282 aa5.55□□□□□ -1.52
COMMD1-205ENST00000455659 MTFP1Q9UDX5 166 aa5.55□□□□□ -1.52
COMMD1-205ENST00000455659 FOXA2Q9Y261 457 aaPredicted RBP5.55□□□□□ -1.52
COMMD1-205ENST00000455659 WSB1Q9Y6I7 421 aa5.55□□□□□ -1.52
COMMD1-205ENST00000455659 GPR31O00270 319 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 CTDSPLO15194 276 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 RBFOX2O43251 390 aaKnown RBP eCLIP5.54□□□□□ -1.52
COMMD1-205ENST00000455659 RAMP3O60896 148 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 ACTL6BO94805 426 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 KBTBD11O94819 623 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 S1PR2O95136 353 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 CNIH1O95406 144 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 RAB3DO95716 219 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 IGHG4P01861 327 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 RPLP1P05386 114 aaKnown RBP5.54□□□□□ -1.52
COMMD1-205ENST00000455659 ELANEP08246 267 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 PGAM2P15259 253 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 CRIP2P52943 208 aaPredicted RBP5.54□□□□□ -1.52
COMMD1-205ENST00000455659 ERVK-16P61578 105 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 CX3CL1P78423 397 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 FXYD3Q14802 87 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 MEF2DQ14814 521 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 TNXAQ16473 311 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 SCGB2B2Q4G0G5 96 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 C10orf55Q5SWW7 151 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 FAAP20Q6NZ36 180 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 STEAP1BQ6NZ63 245 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 LCNL1Q6ZST4 164 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 C8orf86Q6ZUL3 223 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 SSX9Q7RTT3 188 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 LYSMD2Q8IV50 215 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 SLC38A6Q8IZM9 456 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 VKORC1L1Q8N0U8 176 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 SPAG16Q8N0X2 631 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 MFSD4AQ8N468 514 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 ARRDC1Q8N5I2 433 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 TCTEX1D1Q8N7M0 179 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 TMEM229BQ8NBD8 167 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 OR4D10Q8NGI6 311 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 OR4C16Q8NGL9 310 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 VSTM2AQ8TAG5 236 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 PHB2Q99623 299 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 SLC2A9Q9NRM0 540 aa5.54□□□□□ -1.52
COMMD1-205ENST00000455659 FABP12A6NFH5 140 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 SRRM4A7MD48 611 aaKnown RBP5.53□□□□□ -1.52
COMMD1-205ENST00000455659 FCN1O00602 326 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 ARPC1BO15143 372 aaKnown RBP5.53□□□□□ -1.52
COMMD1-205ENST00000455659 MPPED1O15442 326 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 HRASP01112 189 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 CD74P04233 296 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 CRYGBP07316 175 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 AKAIN1P0CW23 69 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 PSMB8P28062 276 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 GNRHRP30968 328 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 TNFSF8P32971 234 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 TAS2R31P59538 309 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 SSBP2P81877 361 aaPredicted RBP5.53□□□□□ -1.52
COMMD1-205ENST00000455659 PJVKQ0ZLH3 352 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 PRSS8Q16651 343 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 PYDC2Q56P42 97 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 C19orf54Q5BKX5 351 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 SPANXN2Q5MJ10 180 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 FOXB2Q5VYV0 432 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 TMEM65Q6PI78 240 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 UNQ5815/PRO19632Q6UWF5 114 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 DHRS11Q6UWP2 260 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 ZNF562Q6V9R5 426 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 C18orf65Q6ZTR6 163 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 LHFPL1Q86WI0 220 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 RNF152Q8N8N0 203 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 TEX45Q8NA69 505 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 LFNGQ8NES3 379 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 DMBX1Q8NFW5 382 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 CD300LFQ8TDQ1 290 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 CASTOR1Q8WTX7 329 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 SRSF12Q8WXF0 261 aaKnown RBP5.53□□□□□ -1.52
COMMD1-205ENST00000455659 TRIM63Q969Q1 353 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 RHOVQ96L33 236 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 ZNF430Q9H8G1 570 aaPredicted RBP5.53□□□□□ -1.52
COMMD1-205ENST00000455659 HRASLSQ9HDD0 168 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 COMMD9Q9P000 198 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 V9GYH0 126 aa5.53□□□□□ -1.52
COMMD1-205ENST00000455659 DPPA5A6NC42 116 aa5.52□□□□□ -1.53
COMMD1-205ENST00000455659 MARCH11A6NNE9 402 aa5.52□□□□□ -1.53
COMMD1-205ENST00000455659 DISC1C4P0D8 188 aa5.52□□□□□ -1.53
COMMD1-205ENST00000455659 GSTZ1O43708 216 aaPredicted RBP5.52□□□□□ -1.53
COMMD1-205ENST00000455659 SOX15O60248 233 aa5.52□□□□□ -1.53
COMMD1-205ENST00000455659 PGLYRP1O75594 196 aaPredicted RBP5.52□□□□□ -1.53
COMMD1-205ENST00000455659 OR2A4O95047 310 aa5.52□□□□□ -1.53
COMMD1-205ENST00000455659 HPRT1P00492 218 aa5.52□□□□□ -1.53
COMMD1-205ENST00000455659 IGLV1-40P01703 118 aa5.52□□□□□ -1.53
COMMD1-205ENST00000455659 APELAP0DMC3 54 aa5.52□□□□□ -1.53
COMMD1-205ENST00000455659 NQO2P16083 231 aa5.52□□□□□ -1.53
COMMD1-205ENST00000455659 PI3P19957 117 aa5.52□□□□□ -1.53
COMMD1-205ENST00000455659 F2RP25116 425 aa5.52□□□□□ -1.53
COMMD1-205ENST00000455659 CD40LGP29965 261 aa5.52□□□□□ -1.53
COMMD1-205ENST00000455659 PPIFP30405 207 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms