RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 Q8WTZ3 238 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 C15orf40Q8WUR7 153 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 BLNKQ8WV28 456 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 ITLN1Q8WWA0 313 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 PSMF1Q92530 271 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 DCUN1D4Q92564 292 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 RAB8BQ92930 207 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 NAT6Q93015 286 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 FGGYQ96C11 551 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 LRRC58Q96CX6 371 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 BTF3L4Q96K17 158 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 DNAJC30Q96LL9 226 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 KCTD7Q96MP8 289 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 OXGR1Q96P68 337 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 TSPAN32Q96QS1 320 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 OR4K3Q96R72 315 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 IMMP2LQ96T52 175 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 MCHR1Q99705 422 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 NRTNQ99748 197 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 MICU1Q9BPX6 476 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 DERL1Q9BUN8 251 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 VAMP8Q9BV40 100 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 C19orf24Q9BVV8 132 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 SCRT1Q9BWW7 348 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 OR51I2Q9H344 312 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 MFSD1Q9H3U5 465 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 PARP11Q9NR21 331 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 NDUFB11Q9NX14 153 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 DNAJC27Q9NZQ0 273 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 DHRS4-AS1Q9P1J3 65 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 SPRR3Q9UBC9 169 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 NAT8BQ9UHF3 227 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 SHPKQ9UHJ6 478 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 LSM2Q9Y333 95 aaKnown RBP1.56□□□□□ -2.16
LINC02540-201ENST00000455554 WSB1Q9Y6I7 421 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 PARP4Q9UKK3 1724 aaKnown RBP1.56□□□□□ -2.16
LINC02540-201ENST00000455554 RAI1Q7Z5J4 1906 aaPredicted RBP1.56□□□□□ -2.16
LINC02540-201ENST00000455554 PXDNLA1KZ92 1463 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 CCDC88CQ9P219 2028 aa1.56□□□□□ -2.16
LINC02540-201ENST00000455554 ADGRB1O14514 1584 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 MED1Q15648 1581 aaPredicted RBP1.55□□□□□ -2.16
LINC02540-201ENST00000455554 RIMBP3Q9UFD9 1639 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 TOPAZ1Q8N9V7 1692 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 RGPD8O14715 1765 aaPredicted RBP1.55□□□□□ -2.16
LINC02540-201ENST00000455554 RGPD5Q99666 1765 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 TRBV24-1A0A075B6N3 115 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 TRAV9-2A0A087WT02 112 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 A0A087WUU8 490 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 IGHV2-26A0A0B4J1V2 119 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 A0A0G2JLM5 398 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 KIR2DS1A0A191URI9 304 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 A0A1B0GW64 132 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 A0A1B0GWB2 263 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 TRDV1A0A1B0GX56 115 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 PSMB11A5LHX3 300 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 MAP1LC3B2A6NCE7 125 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF860A6NHJ4 632 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 SLC22A20A6NK97 555 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 FAM166BA8MTA8 275 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 FABP5P3A8MUU1 101 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF727A8MUV8 499 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 UMAD1C9J7I0 102 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 F5H5K5 113 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 H0Y9J4 135 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 J3QLI3 93 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 J3QR89 54 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 K7EPK0 472 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 DCTN6O00399 190 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 HMGB3O15347 200 aaKnown RBP1.55□□□□□ -2.16
LINC02540-201ENST00000455554 PHF1O43189 567 aaPredicted RBP1.55□□□□□ -2.16
LINC02540-201ENST00000455554 ERI3O43414 337 aaKnown RBP1.55□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF207O43670 478 aaKnown RBP1.55□□□□□ -2.16
LINC02540-201ENST00000455554 TRAF3IP2O43734 574 aaPredicted RBP1.55□□□□□ -2.16
LINC02540-201ENST00000455554 CD5LO43866 347 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 MPZL2O60487 215 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 HYPMO75409 117 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 EEDO75530 441 aaKnown RBP1.55□□□□□ -2.16
LINC02540-201ENST00000455554 REM1O75628 298 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 TRAPPC6AO75865 159 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 PROSCO94903 275 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 MPZL1O95297 269 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 RENP00797 406 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 HLA-HP01893 362 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 LGALS2P05162 132 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 CSN2P05814 226 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 RHOCP08134 193 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 RBMY1CP0DJD4 496 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 IGLC2P0DOY2 106 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 IGLC3P0DOY3 106 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 ERGP11308 486 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 CTSEP14091 401 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 ZNF43P17038 809 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 ALOX5APP20292 161 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 PMCHP20382 165 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 CSRP1P21291 193 aaKnown RBP1.55□□□□□ -2.16
LINC02540-201ENST00000455554 IGHV1-2P23083 117 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 PRTN3P24158 256 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 NPY1RP25929 384 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 ATP6V0CP27449 155 aa1.55□□□□□ -2.16
LINC02540-201ENST00000455554 TSPOP30536 169 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms