RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 HFEQ30201 348 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 THOC7Q6I9Y2 204 aaKnown RBP3.95□□□□□ -1.78
RIF1-207ENST00000454583 TMED4Q7Z7H5 227 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 ZNF114Q8NC26 417 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 WFDC11Q8NEX6 87 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 BPIFCQ8NFQ6 507 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 OR5T2Q8NGG2 359 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 OR52L2PQ8NGH6 319 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 OR52E5Q8NH55 327 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 LRRC20Q8TCA0 184 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 PHF21AQ96BD5 680 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 LSM4Q9Y4Z0 139 aaKnown RBP3.95□□□□□ -1.78
RIF1-207ENST00000454583 RFNGQ9Y644 331 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 SOX21Q9Y651 276 aaPredicted RBP3.95□□□□□ -1.78
RIF1-207ENST00000454583 KRBOX1C9JBD0 128 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 E5RGE8 158 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 J3QR06 171 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 VDAC1P21796 283 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 DLX1P56177 255 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 MRPS15P82914 257 aaKnown RBP3.95□□□□□ -1.78
RIF1-207ENST00000454583 EWSR1Q01844 656 aaKnown RBP eCLIP3.95□□□□□ -1.78
RIF1-207ENST00000454583 ATXN7L3Q14CW9 347 aaPredicted RBP3.95□□□□□ -1.78
RIF1-207ENST00000454583 CHRFAM7AQ494W8 412 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 KRBOX4Q5JUW0 171 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 FAM74A1Q5RGS3 127 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 OR10V1Q8NGI7 309 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 MBD3L1Q8WWY6 194 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 NEIL1Q96FI4 390 aaPredicted RBP3.95□□□□□ -1.78
RIF1-207ENST00000454583 NABP2Q9BQ15 211 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 SH3BGRL3Q9H299 93 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 TMEM133Q9H2Q1 129 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 TAF9BQ9HBM6 251 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 SLC25A10Q9UBX3 287 aaPredicted RBP3.95□□□□□ -1.78
RIF1-207ENST00000454583 NSG2Q9Y328 171 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 SESN1Q9Y6P5 492 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 TMEM218A2RU14 115 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 TEX22C9J3V5 150 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 SIRPB1O00241 398 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 RLN1P04808 185 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 BAXQ07812 192 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 CXorf66Q5JRM2 361 aaPredicted RBP3.94□□□□□ -1.78
RIF1-207ENST00000454583 DPPA3Q6W0C5 159 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 FOXRED2Q8IWF2 684 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 TPRX1Q8N7U7 411 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 PCNPQ8WW12 178 aaKnown RBP3.94□□□□□ -1.78
RIF1-207ENST00000454583 C17orf77Q96MU5 243 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 SEC11CQ9BY50 192 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 ARL6Q9H0F7 186 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 RAB1BQ9H0U4 201 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 TMEM14BQ9NUH8 114 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 WSB1Q9Y6I7 421 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 ABCA12Q86UK0 2595 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.94□□□□□ -1.78
RIF1-207ENST00000454583 CD5LO43866 347 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 IGKV1D-33P01593 117 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 IGKV1-33P01594 117 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 SRPXP78539 464 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 GUCA2BQ16661 112 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 SP6Q3SY56 376 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 TMEM17Q86X19 198 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 OR8H3Q8N146 312 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 OR4C12Q96R67 309 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 PCNX1Q96RV3 2341 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 TRAV39A0A0B4J263 110 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 ST8SIA5O15466 376 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 RPL12P30050 165 aaKnown RBP3.94□□□□□ -1.78
RIF1-207ENST00000454583 NHLH2Q02577 135 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 LILRB2Q8N423 598 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 TMEM252Q8N6L7 170 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 GPHA2Q96T91 129 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 SSBP3Q9BWW4 388 aaPredicted RBP3.94□□□□□ -1.78
RIF1-207ENST00000454583 UBTD1Q9HAC8 227 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 TIMM9Q9Y5J7 89 aa3.94□□□□□ -1.78
RIF1-207ENST00000454583 COL7A1Q02388 2944 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 RBMXL2O75526 392 aaKnown RBP3.93□□□□□ -1.78
RIF1-207ENST00000454583 GZMHP20718 246 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 UBE2E1P51965 193 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 MFAP2P55001 183 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 GNB2P62879 340 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 VHLLQ6RSH7 139 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 VMO1Q7Z5L0 202 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 SGPP2Q8IWX5 399 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 LGI3Q8N145 548 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 GPER1Q99527 375 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 PSMG3Q9BT73 122 aaPredicted RBP3.93□□□□□ -1.78
RIF1-207ENST00000454583 MS4A7Q9GZW8 240 aaPredicted RBP3.93□□□□□ -1.78
RIF1-207ENST00000454583 UFSP2Q9NUQ7 469 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 OR14J1Q9UGF5 321 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 FXYD6-FXYD2A0A087WZ82 144 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 A6NDX4 124 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 C15orf62A8K5M9 175 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 COLCA2A8K830 154 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 SEC14L6B5MCN3 397 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 CLDN34H7C241 214 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 ATG12O94817 140 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 NXPH2O95156 264 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 CRYZL1O95825 349 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 PJVKQ0ZLH3 352 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 IAH1Q2TAA2 248 aaPredicted RBP3.93□□□□□ -1.78
RIF1-207ENST00000454583 LRRC75BQ2VPJ9 315 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms