RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 ANKRD13BQ86YJ7 626 aa13.16□□□□□ -0.3
TNFRSF4-202ENST00000453580 ZBTB34Q8NCN2 500 aa13.16□□□□□ -0.3
TNFRSF4-202ENST00000453580 SRSF12Q8WXF0 261 aaKnown RBP13.16□□□□□ -0.3
TNFRSF4-202ENST00000453580 ACOT12Q8WYK0 555 aa13.16□□□□□ -0.3
TNFRSF4-202ENST00000453580 TRAV18A0A075B6X5 111 aa13.15□□□□□ -0.3
TNFRSF4-202ENST00000453580 FAM223BA6NKX1 122 aa13.15□□□□□ -0.3
TNFRSF4-202ENST00000453580 LINC00473A8K010 186 aa13.15□□□□□ -0.3
TNFRSF4-202ENST00000453580 TUSC2O75896 110 aa13.15□□□□□ -0.3
TNFRSF4-202ENST00000453580 HRASP01112 189 aa13.15□□□□□ -0.3
TNFRSF4-202ENST00000453580 MAS1LP35410 378 aa13.15□□□□□ -0.3
TNFRSF4-202ENST00000453580 FAM223AQ8IWN6 122 aa13.15□□□□□ -0.3
TNFRSF4-202ENST00000453580 BEST4Q8NFU0 473 aa13.15□□□□□ -0.3
TNFRSF4-202ENST00000453580 C5orf30Q96GV9 206 aa13.15□□□□□ -0.3
TNFRSF4-202ENST00000453580 PEF1Q9UBV8 284 aaKnown RBP13.15□□□□□ -0.3
TNFRSF4-202ENST00000453580 ELF5Q9UKW6 265 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF4-202ENST00000453580 SPATA2Q9UM82 520 aa13.15□□□□□ -0.3
TNFRSF4-202ENST00000453580 GP9P14770 177 aa13.14□□□□□ -0.31
TNFRSF4-202ENST00000453580 SSBP2P81877 361 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF4-202ENST00000453580 ZNF343Q6P1L6 599 aa13.14□□□□□ -0.31
TNFRSF4-202ENST00000453580 TCTEX1D2Q8WW35 142 aa13.14□□□□□ -0.31
TNFRSF4-202ENST00000453580 SNAPC3Q92966 411 aa13.14□□□□□ -0.31
TNFRSF4-202ENST00000453580 S100A16Q96FQ6 103 aaKnown RBP13.14□□□□□ -0.31
TNFRSF4-202ENST00000453580 DNAH3Q8TD57 4116 aa13.13□□□□□ -0.31
TNFRSF4-202ENST00000453580 H0Y980 276 aa13.13□□□□□ -0.31
TNFRSF4-202ENST00000453580 J3QRK9 145 aa13.13□□□□□ -0.31
TNFRSF4-202ENST00000453580 DHFRP00374 187 aa13.13□□□□□ -0.31
TNFRSF4-202ENST00000453580 SAA1P0DJI8 122 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF4-202ENST00000453580 SPNP16150 400 aa13.13□□□□□ -0.31
TNFRSF4-202ENST00000453580 CATR1Q13166 79 aa13.13□□□□□ -0.31
TNFRSF4-202ENST00000453580 RPEL1Q2QD12 228 aa13.13□□□□□ -0.31
TNFRSF4-202ENST00000453580 HOGA1Q86XE5 327 aa13.13□□□□□ -0.31
TNFRSF4-202ENST00000453580 ADAD2Q8NCV1 583 aaKnown RBP13.13□□□□□ -0.31
TNFRSF4-202ENST00000453580 ZNF430Q9H8G1 570 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF4-202ENST00000453580 PEMTQ9UBM1 199 aa13.13□□□□□ -0.31
TNFRSF4-202ENST00000453580 TNCP24821 2201 aa13.12□□□□□ -0.31
TNFRSF4-202ENST00000453580 A0A087WXM4 84 aa13.12□□□□□ -0.31
TNFRSF4-202ENST00000453580 ANKRD34BA5PLL1 514 aa13.12□□□□□ -0.31
TNFRSF4-202ENST00000453580 AIREO43918 545 aa13.12□□□□□ -0.31
TNFRSF4-202ENST00000453580 SSX5O60225 188 aa13.12□□□□□ -0.31
TNFRSF4-202ENST00000453580 OR2A4O95047 310 aa13.12□□□□□ -0.31
TNFRSF4-202ENST00000453580 KLF5Q13887 457 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF4-202ENST00000453580 IDO2Q6ZQW0 420 aa13.12□□□□□ -0.31
TNFRSF4-202ENST00000453580 MFSD4AQ8N468 514 aa13.12□□□□□ -0.31
TNFRSF4-202ENST00000453580 TTC9CQ8N5M4 171 aa13.12□□□□□ -0.31
TNFRSF4-202ENST00000453580 OR9G4Q8NGQ1 327 aa13.12□□□□□ -0.31
TNFRSF4-202ENST00000453580 OR2A7Q96R45 310 aa13.12□□□□□ -0.31
TNFRSF4-202ENST00000453580 RSRP1Q9BUV0 290 aa13.12□□□□□ -0.31
TNFRSF4-202ENST00000453580 DPPA5A6NC42 116 aa13.11□□□□□ -0.31
TNFRSF4-202ENST00000453580 KBTBD11O94819 623 aa13.11□□□□□ -0.31
TNFRSF4-202ENST00000453580 TNFAIP8O95379 198 aa13.11□□□□□ -0.31
TNFRSF4-202ENST00000453580 IGLV1-51P01701 117 aa13.11□□□□□ -0.31
TNFRSF4-202ENST00000453580 CLEC2LP0C7M8 214 aa13.11□□□□□ -0.31
TNFRSF4-202ENST00000453580 FCGR2CP31995 323 aa13.11□□□□□ -0.31
TNFRSF4-202ENST00000453580 ATP5G2Q06055 141 aa13.11□□□□□ -0.31
TNFRSF4-202ENST00000453580 NECAP1Q8NC96 275 aa13.11□□□□□ -0.31
TNFRSF4-202ENST00000453580 OR5H6Q8NGV6 325 aa13.11□□□□□ -0.31
TNFRSF4-202ENST00000453580 OR4A5Q8NH83 315 aa13.11□□□□□ -0.31
TNFRSF4-202ENST00000453580 CD300LFQ8TDQ1 290 aa13.11□□□□□ -0.31
TNFRSF4-202ENST00000453580 SLC25A38Q96DW6 304 aa13.11□□□□□ -0.31
TNFRSF4-202ENST00000453580 AUNIPQ9H7T9 357 aa13.11□□□□□ -0.31
TNFRSF4-202ENST00000453580 ZNF257Q9Y2Q1 563 aa13.11□□□□□ -0.31
TNFRSF4-202ENST00000453580 IGKV1D-13A0A0B4J2D9 117 aa13.1□□□□□ -0.31
TNFRSF4-202ENST00000453580 RBFOX2O43251 390 aaKnown RBP eCLIP13.1□□□□□ -0.31
TNFRSF4-202ENST00000453580 XRCC3O43542 346 aa13.1□□□□□ -0.31
TNFRSF4-202ENST00000453580 IGKV1-13P0DP09 117 aa13.1□□□□□ -0.31
TNFRSF4-202ENST00000453580 RHOGP84095 191 aa13.1□□□□□ -0.31
TNFRSF4-202ENST00000453580 MRGPRG-AS1Q2M3A8 158 aa13.1□□□□□ -0.31
TNFRSF4-202ENST00000453580 UBE2NLQ5JXB2 153 aa13.1□□□□□ -0.31
TNFRSF4-202ENST00000453580 OR5AP2Q8NGF4 316 aa13.1□□□□□ -0.31
TNFRSF4-202ENST00000453580 OR13F1Q8NGS4 319 aa13.1□□□□□ -0.31
TNFRSF4-202ENST00000453580 TMEM167AQ8TBQ9 72 aa13.1□□□□□ -0.31
TNFRSF4-202ENST00000453580 SECTM1Q8WVN6 248 aa13.1□□□□□ -0.31
TNFRSF4-202ENST00000453580 ZMAT4Q9H898 229 aa13.1□□□□□ -0.31
TNFRSF4-202ENST00000453580 IFT46Q9NQC8 304 aa13.1□□□□□ -0.31
TNFRSF4-202ENST00000453580 TAS2R8Q9NYW2 309 aa13.1□□□□□ -0.31
TNFRSF4-202ENST00000453580 SIGLEC8Q9NYZ4 499 aa13.1□□□□□ -0.31
TNFRSF4-202ENST00000453580 TRBV9A0A0B4J1U6 114 aa13.09□□□□□ -0.31
TNFRSF4-202ENST00000453580 PPYP01298 95 aa13.09□□□□□ -0.31
TNFRSF4-202ENST00000453580 IGLV2-14P01704 120 aa13.09□□□□□ -0.31
TNFRSF4-202ENST00000453580 RPL27AP46776 148 aaKnown RBP13.09□□□□□ -0.31
TNFRSF4-202ENST00000453580 RPL30P62888 115 aaKnown RBP13.09□□□□□ -0.31
TNFRSF4-202ENST00000453580 DYRK1AQ13627 763 aa13.09□□□□□ -0.31
TNFRSF4-202ENST00000453580 OR2B11Q5JQS5 317 aa13.09□□□□□ -0.31
TNFRSF4-202ENST00000453580 LCN12Q6JVE5 192 aa13.09□□□□□ -0.31
TNFRSF4-202ENST00000453580 SGPP2Q8IWX5 399 aa13.09□□□□□ -0.31
TNFRSF4-202ENST00000453580 TSPAN14Q8NG11 270 aa13.09□□□□□ -0.31
TNFRSF4-202ENST00000453580 GIMAP1Q8WWP7 306 aa13.09□□□□□ -0.31
TNFRSF4-202ENST00000453580 KCTD12Q96CX2 325 aaKnown RBP13.09□□□□□ -0.31
TNFRSF4-202ENST00000453580 RNF167Q9H6Y7 350 aa13.09□□□□□ -0.31
TNFRSF4-202ENST00000453580 NPIPB5A8MRT5 1133 aa13.08□□□□□ -0.32
TNFRSF4-202ENST00000453580 FGF2P09038 288 aa13.08□□□□□ -0.32
TNFRSF4-202ENST00000453580 APELAP0DMC3 54 aa13.08□□□□□ -0.32
TNFRSF4-202ENST00000453580 HIST1H1BP16401 226 aaKnown RBP13.08□□□□□ -0.32
TNFRSF4-202ENST00000453580 SYNJ2BPP57105 145 aa13.08□□□□□ -0.32
TNFRSF4-202ENST00000453580 HERV-K104P61576 105 aa13.08□□□□□ -0.32
TNFRSF4-202ENST00000453580 RPL8P62917 257 aaKnown RBP13.08□□□□□ -0.32
TNFRSF4-202ENST00000453580 EIF4EBP1Q13541 118 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF4-202ENST00000453580 EXOSC2Q13868 293 aaKnown RBP13.08□□□□□ -0.32
TNFRSF4-202ENST00000453580 PUSL1Q8N0Z8 303 aaKnown RBP13.08□□□□□ -0.32
TNFRSF4-202ENST00000453580 OR2K2Q8NGT1 345 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms