RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 RANBP3Q9H6Z4 567 aaPredicted RBP10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 RANGRFQ9HD47 186 aaPredicted RBP10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 GSKIPQ9P0R6 139 aa10.1□□□□□ -0.79
HLA-DPA1-244ENST00000453337 CSMD2Q7Z408 3487 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 IGHV3OR16-10A0A075B7F0 116 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 IGHV3-72A0A0B4J1Y9 119 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 MARCH11A6NNE9 402 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 SNAPC5O75971 98 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 VENTXO95231 258 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 MOSP00540 346 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 IGKV1-5P01602 117 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 IGKV1-16P04430 117 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 FBP1P09467 338 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 FAM106CPP0CH98 169 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 FGL1Q08830 312 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 SMCO1Q147U7 214 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 RUSC1-AS1Q66K80 236 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 BRD3OSQ6XYD6 125 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 SPNS3Q6ZMD2 512 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 DYNAPQ8N1N2 210 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 ZBTB8BQ8NAP8 495 aaPredicted RBP10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 OR2T10Q8NGZ9 312 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 VSTM2AQ8TAG5 236 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 CFHR4Q92496 578 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 HARBI1Q96MB7 349 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 ZFP57Q9NU63 452 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 COA4Q9NYJ1 87 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 CACFD1Q9UGQ2 172 aa10.09□□□□□ -0.79
HLA-DPA1-244ENST00000453337 FLNAP21333 2647 aaKnown RBP10.08□□□□□ -0.8
HLA-DPA1-244ENST00000453337 MPTX1A8MV57 137 aa10.08□□□□□ -0.8
HLA-DPA1-244ENST00000453337 P0C879 139 aa10.08□□□□□ -0.8
HLA-DPA1-244ENST00000453337 DYNLT3P51808 116 aa10.08□□□□□ -0.8
HLA-DPA1-244ENST00000453337 EBI3Q14213 229 aa10.08□□□□□ -0.8
HLA-DPA1-244ENST00000453337 VMA21Q3ZAQ7 101 aa10.08□□□□□ -0.8
HLA-DPA1-244ENST00000453337 SSX9Q7RTT3 188 aa10.08□□□□□ -0.8
HLA-DPA1-244ENST00000453337 TCTE3Q8IZS6 198 aa10.08□□□□□ -0.8
HLA-DPA1-244ENST00000453337 OR1S1Q8NH92 325 aa10.08□□□□□ -0.8
HLA-DPA1-244ENST00000453337 C17orf50Q8WW18 174 aa10.08□□□□□ -0.8
HLA-DPA1-244ENST00000453337 FLNBO75369 2602 aaKnown RBP10.08□□□□□ -0.8
HLA-DPA1-244ENST00000453337 A0A0U1RQK1 487 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 SRRM4A7MD48 611 aaKnown RBP10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 FSHBP01225 129 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 IGKV1D-33P01593 117 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 IGKV1-33P01594 117 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 RLN2P04090 185 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 FOSL1P15407 271 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 PSMB6P28072 239 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 UBE2KP61086 200 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 IL15RAQ13261 267 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 HES1Q14469 280 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 AANATQ16613 207 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 OR4A47Q6IF82 309 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 VKORC1L1Q8N0U8 176 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 TEX45Q8NA69 505 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 OR2T35Q8NGX2 323 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 OR4A16Q8NH70 328 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 OR4A5Q8NH83 315 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 EAF1Q96JC9 268 aaPredicted RBP10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 FYTTD1Q96QD9 318 aaKnown RBP10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 YAE1D1Q9NRH1 226 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 TMEM140Q9NV12 185 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 FKBP11Q9NYL4 201 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 BET1LQ9NYM9 111 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 CACNG5Q9UF02 275 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 TNCP24821 2201 aa10.07□□□□□ -0.8
HLA-DPA1-244ENST00000453337 ZANQ9Y493 2812 aa10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 A0A0G2JRQ6 117 aa10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 FAM90A26D6RGX4 464 aa10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 UPK2O00526 184 aa10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 ST8SIA3O43173 380 aa10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 PITX3O75364 302 aa10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 RBMXL2O75526 392 aaKnown RBP10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 SNRNP70P08621 437 aaKnown RBP10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 IL6RP08887 468 aaPredicted RBP10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 HNF1AP20823 631 aa10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 ID3Q02535 119 aa10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 Q6ZRM9 215 aa10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 C9orf139Q6ZV77 190 aa10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 PUSL1Q8N0Z8 303 aaKnown RBP10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 OR8H1Q8NGG4 311 aa10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 OR4D5Q8NGN0 318 aa10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 PPP1R1CQ8WVI7 109 aa10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 C1RLQ9NZP8 487 aa10.06□□□□□ -0.8
HLA-DPA1-244ENST00000453337 MED6O75586 246 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 SPDEFO95238 335 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 IGLV2-23P01705 113 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 FGF2P09038 288 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 OR9G9P0C7N8 305 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 PET100P0DJ07 73 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 SAA1P0DJI8 122 aaPredicted RBP10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 CD99P14209 185 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 PAX6P26367 422 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 NKX2-1P43699 371 aaPredicted RBP10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 RELBQ01201 579 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 KRTAP1-1Q07627 177 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 HNF4GQ14541 408 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 PSG5Q15238 335 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 IZUMO4Q1ZYL8 232 aa10.05□□□□□ -0.8
HLA-DPA1-244ENST00000453337 LRRC75BQ2VPJ9 315 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms