RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 ARRDC1Q8N5I2 433 aa15.63■□□□□ 0.09
COL9A3-202ENST00000452372 ZFP57Q9NU63 452 aa15.63■□□□□ 0.09
COL9A3-202ENST00000452372 FBXO7Q9Y3I1 522 aa15.63■□□□□ 0.09
COL9A3-202ENST00000452372 NUBP2Q9Y5Y2 271 aa15.63■□□□□ 0.09
COL9A3-202ENST00000452372 TRAV41A0A0B4J266 112 aa15.62■□□□□ 0.09
COL9A3-202ENST00000452372 GSTZ1O43708 216 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-202ENST00000452372 CD74P04233 296 aa15.62■□□□□ 0.09
COL9A3-202ENST00000452372 ELANEP08246 267 aa15.62■□□□□ 0.09
COL9A3-202ENST00000452372 EGR2P11161 476 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-202ENST00000452372 S100A5P33763 92 aa15.62■□□□□ 0.09
COL9A3-202ENST00000452372 UCP3P55916 312 aa15.62■□□□□ 0.09
COL9A3-202ENST00000452372 TMEM267Q0VDI3 215 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-202ENST00000452372 PJVKQ0ZLH3 352 aa15.62■□□□□ 0.09
COL9A3-202ENST00000452372 FOXE3Q13461 319 aa15.62■□□□□ 0.09
COL9A3-202ENST00000452372 AADACL3Q5VUY0 350 aa15.62■□□□□ 0.09
COL9A3-202ENST00000452372 CMTM1Q8IZ96 169 aa15.62■□□□□ 0.09
COL9A3-202ENST00000452372 RNF152Q8N8N0 203 aa15.62■□□□□ 0.09
COL9A3-202ENST00000452372 A0A1W2PRX2 142 aa15.61■□□□□ 0.09
COL9A3-202ENST00000452372 GPR31O00270 319 aa15.61■□□□□ 0.09
COL9A3-202ENST00000452372 RBFOX2O43251 390 aaKnown RBP eCLIP15.61■□□□□ 0.096e-13■■■■□ 23.9
COL9A3-202ENST00000452372 FXYD3Q14802 87 aa15.61■□□□□ 0.09
COL9A3-202ENST00000452372 MRGPRG-AS1Q2M3A8 158 aa15.61■□□□□ 0.09
COL9A3-202ENST00000452372 C19orf54Q5BKX5 351 aa15.61■□□□□ 0.09
COL9A3-202ENST00000452372 STEAP1BQ6NZ63 245 aa15.61■□□□□ 0.09
COL9A3-202ENST00000452372 SPAG16Q8N0X2 631 aa15.61■□□□□ 0.09
COL9A3-202ENST00000452372 MINDY2Q8NBR6 621 aa15.61■□□□□ 0.09
COL9A3-202ENST00000452372 OR4F17Q8NGA8 305 aa15.61■□□□□ 0.09
COL9A3-202ENST00000452372 R3HDM4Q96D70 268 aa15.61■□□□□ 0.09
COL9A3-202ENST00000452372 OR4F4Q96R69 305 aa15.61■□□□□ 0.09
COL9A3-202ENST00000452372 RSRP1Q9BUV0 290 aa15.61■□□□□ 0.09
COL9A3-202ENST00000452372 ARPC1BO15143 372 aaKnown RBP15.6■□□□□ 0.09
COL9A3-202ENST00000452372 RAMP3O60896 148 aa15.6■□□□□ 0.09
COL9A3-202ENST00000452372 PGLYRP1O75594 196 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-202ENST00000452372 CNIH1O95406 144 aa15.6■□□□□ 0.09
COL9A3-202ENST00000452372 RAB3DO95716 219 aa15.6■□□□□ 0.09
COL9A3-202ENST00000452372 SAA1P0DJI8 122 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-202ENST00000452372 PSMB8P28062 276 aa15.6■□□□□ 0.09
COL9A3-202ENST00000452372 RPL23AP62750 156 aaKnown RBP15.6■□□□□ 0.09
COL9A3-202ENST00000452372 SSBP2P81877 361 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-202ENST00000452372 PRSS8Q16651 343 aa15.6■□□□□ 0.09
COL9A3-202ENST00000452372 AKIRIN2Q53H80 203 aa15.6■□□□□ 0.09
COL9A3-202ENST00000452372 CXorf66Q5JRM2 361 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-202ENST00000452372 KHDC1LQ5JSQ8 128 aa15.6■□□□□ 0.09
COL9A3-202ENST00000452372 LHFPL1Q86WI0 220 aa15.6■□□□□ 0.09
COL9A3-202ENST00000452372 TCTEX1D1Q8N7M0 179 aa15.6■□□□□ 0.09
COL9A3-202ENST00000452372 OR4D10Q8NGI6 311 aa15.6■□□□□ 0.09
COL9A3-202ENST00000452372 OR51H1Q8NH63 302 aa15.6■□□□□ 0.09
COL9A3-202ENST00000452372 CD300LFQ8TDQ1 290 aa15.6■□□□□ 0.09
COL9A3-202ENST00000452372 ABHD5Q8WTS1 349 aa15.6■□□□□ 0.09
COL9A3-202ENST00000452372 ARPC1AQ92747 370 aa15.6■□□□□ 0.09
COL9A3-202ENST00000452372 FAM103A1Q9BTL3 118 aaKnown RBP15.6■□□□□ 0.09
COL9A3-202ENST00000452372 G3V4G9 280 aa15.59■□□□□ 0.09
COL9A3-202ENST00000452372 HRASP01112 189 aa15.59■□□□□ 0.09
COL9A3-202ENST00000452372 IGLV1-40P01703 118 aa15.59■□□□□ 0.09
COL9A3-202ENST00000452372 RPLP1P05386 114 aaKnown RBP15.59■□□□□ 0.09
COL9A3-202ENST00000452372 GNB1P62873 340 aa15.59■□□□□ 0.09
COL9A3-202ENST00000452372 ECSCRQ19T08 205 aa15.59■□□□□ 0.09
COL9A3-202ENST00000452372 BEAN1Q3B7T3 259 aa15.59■□□□□ 0.09
COL9A3-202ENST00000452372 FOXB2Q5VYV0 432 aa15.59■□□□□ 0.09
COL9A3-202ENST00000452372 IDO2Q6ZQW0 420 aa15.59■□□□□ 0.09
COL9A3-202ENST00000452372 CCDC190Q86UF4 302 aa15.59■□□□□ 0.09
COL9A3-202ENST00000452372 SLC38A6Q8IZM9 456 aa15.59■□□□□ 0.09
COL9A3-202ENST00000452372 POC5Q8NA72 575 aa15.59■□□□□ 0.09
COL9A3-202ENST00000452372 HPRT1P00492 218 aa15.58■□□□□ 0.08
COL9A3-202ENST00000452372 RLN1P04808 185 aa15.58■□□□□ 0.08
COL9A3-202ENST00000452372 PTBP1P26599 531 aaKnown RBP eCLIP15.58■□□□□ 0.08
COL9A3-202ENST00000452372 MEF2DQ14814 521 aa15.58■□□□□ 0.08
COL9A3-202ENST00000452372 KPRPQ5T749 579 aaPredicted RBP15.58■□□□□ 0.08
COL9A3-202ENST00000452372 LCNL1Q6ZST4 164 aa15.58■□□□□ 0.08
COL9A3-202ENST00000452372 VKORC1L1Q8N0U8 176 aa15.58■□□□□ 0.08
COL9A3-202ENST00000452372 LFNGQ8NES3 379 aa15.58■□□□□ 0.08
COL9A3-202ENST00000452372 TERB2Q8NHR7 220 aa15.58■□□□□ 0.08
COL9A3-202ENST00000452372 VSTM2AQ8TAG5 236 aa15.58■□□□□ 0.08
COL9A3-202ENST00000452372 RHOVQ96L33 236 aa15.58■□□□□ 0.08
COL9A3-202ENST00000452372 AIFM2Q9BRQ8 373 aa15.58■□□□□ 0.08
COL9A3-202ENST00000452372 ZNF430Q9H8G1 570 aaPredicted RBP15.58■□□□□ 0.08
COL9A3-202ENST00000452372 V9GYH0 126 aa15.58■□□□□ 0.08
COL9A3-202ENST00000452372 CREBL2O60519 120 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-202ENST00000452372 OR2A4O95047 310 aa15.57■□□□□ 0.08
COL9A3-202ENST00000452372 ZNF735P0CB33 412 aa15.57■□□□□ 0.08
COL9A3-202ENST00000452372 AKAIN1P0CW23 69 aa15.57■□□□□ 0.08
COL9A3-202ENST00000452372 F2RP25116 425 aa15.57■□□□□ 0.08
COL9A3-202ENST00000452372 S100GP29377 79 aa15.57■□□□□ 0.08
COL9A3-202ENST00000452372 SLC6A1P30531 599 aa15.57■□□□□ 0.08
COL9A3-202ENST00000452372 CDX1P47902 265 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-202ENST00000452372 SAMD5Q5TGI4 173 aa15.57■□□□□ 0.08
COL9A3-202ENST00000452372 UNQ5815/PRO19632Q6UWF5 114 aa15.57■□□□□ 0.08
COL9A3-202ENST00000452372 MMD2Q8IY49 270 aa15.57■□□□□ 0.08
COL9A3-202ENST00000452372 PUSL1Q8N0Z8 303 aaKnown RBP15.57■□□□□ 0.08
COL9A3-202ENST00000452372 GRPEL2Q8TAA5 225 aa15.57■□□□□ 0.08
COL9A3-202ENST00000452372 OR2A7Q96R45 310 aa15.57■□□□□ 0.08
COL9A3-202ENST00000452372 FOXA2Q9Y261 457 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-202ENST00000452372 A0A1W2PN81 502 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 ANKRD20A5PA0PJZ0 165 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 SOX15O60248 233 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 PF4V1P10720 104 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 NQO2P16083 231 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 CHRNA7P36544 502 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 TAS2R31P59538 309 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 TNXAQ16473 311 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms