RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 DEFA1P59665 94 aa9.44□□□□□ -0.9
LINC00339-205ENST00000452322 DEFA3P59666 94 aa9.44□□□□□ -0.9
LINC00339-205ENST00000452322 UBE2KP61086 200 aa9.44□□□□□ -0.9
LINC00339-205ENST00000452322 VMA21Q3ZAQ7 101 aa9.44□□□□□ -0.9
LINC00339-205ENST00000452322 ZNF585BQ52M93 769 aa9.44□□□□□ -0.9
LINC00339-205ENST00000452322 TMED4Q7Z7H5 227 aa9.44□□□□□ -0.9
LINC00339-205ENST00000452322 SGPP2Q8IWX5 399 aa9.44□□□□□ -0.9
LINC00339-205ENST00000452322 ADAD2Q8NCV1 583 aaKnown RBP9.44□□□□□ -0.9
LINC00339-205ENST00000452322 OR4F5Q8NH21 305 aa9.44□□□□□ -0.9
LINC00339-205ENST00000452322 TMEM230Q96A57 120 aa9.44□□□□□ -0.9
LINC00339-205ENST00000452322 TP53RKQ96S44 253 aa9.44□□□□□ -0.9
LINC00339-205ENST00000452322 AIFM2Q9BRQ8 373 aa9.44□□□□□ -0.9
LINC00339-205ENST00000452322 FBXL15Q9H469 300 aa9.44□□□□□ -0.9
LINC00339-205ENST00000452322 C16orf95Q9H693 158 aa9.44□□□□□ -0.9
LINC00339-205ENST00000452322 METTL1Q9UBP6 276 aaKnown RBP9.44□□□□□ -0.9
LINC00339-205ENST00000452322 SH2D7A6NKC9 451 aaPredicted RBP9.43□□□□□ -0.9
LINC00339-205ENST00000452322 SERPINE2P07093 398 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 CRYGBP07316 175 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 SAA1P0DJI8 122 aaPredicted RBP9.43□□□□□ -0.9
LINC00339-205ENST00000452322 RPA2P15927 270 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 NQO2P16083 231 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 UCP1P25874 307 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 LPAR6P43657 344 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 PLGLAQ15195 96 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 POU2AF1Q16633 256 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 LIN54Q6MZP7 749 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 PPP1R27Q86WC6 154 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 CENPSQ8N2Z9 138 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 TEX45Q8NA69 505 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 OR2T6Q8NHC8 308 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 VSTM2AQ8TAG5 236 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 TAF15Q92804 592 aaKnown RBP eCLIP9.43□□□□□ -0.9
LINC00339-205ENST00000452322 GALNT14Q96FL9 552 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 RHOVQ96L33 236 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 C19orf24Q9BVV8 132 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 PALMDQ9NP74 551 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 SIGLEC9Q9Y336 463 aa9.43□□□□□ -0.9
LINC00339-205ENST00000452322 A0A1B0GUS0 222 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 FAM240BA0A1B0GVZ2 78 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 TMEM89A2RUT3 159 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 KCNAB3O43448 404 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 IGHG2P01859 326 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 TCRBP04435 133 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 OR5AC1P0C628 307 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 AKR1C4P17516 323 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 UBE2MP61081 183 aaKnown RBP9.42□□□□□ -0.9
LINC00339-205ENST00000452322 DHODHQ02127 395 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 FOXL1Q12952 345 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 TMEM128Q5BJH2 165 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 C9orf152Q5JTZ5 239 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 Q6ZS46 218 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 SLC25A42Q86VD7 318 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 VKORC1L1Q8N0U8 176 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 PUSL1Q8N0Z8 303 aaKnown RBP9.42□□□□□ -0.9
LINC00339-205ENST00000452322 LINC01006Q8NI28 216 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 R3HDM4Q96D70 268 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 TMEM222Q9H0R3 208 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 C20orf85Q9H1P6 137 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 BEX1Q9HBH7 125 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 TPSG1Q9NRR2 321 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 BET1LQ9NYM9 111 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 KCNIP3Q9Y2W7 256 aa9.42□□□□□ -0.9
LINC00339-205ENST00000452322 IGHV7-81A0A0B4J1V7 117 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 CLPSL1A2RUU4 121 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 MARCH11A6NNE9 402 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 ARPC1BO15143 372 aaKnown RBP9.41□□□□□ -0.9
LINC00339-205ENST00000452322 CREBL2O60519 120 aaPredicted RBP9.41□□□□□ -0.9
LINC00339-205ENST00000452322 KBTBD11O94819 623 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 OR2A4O95047 310 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 ANXA3P12429 323 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 ERVK-16P61578 105 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 SUPT4H1P63272 117 aaKnown RBP9.41□□□□□ -0.9
LINC00339-205ENST00000452322 TRIM16LQ309B1 348 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 KRTAP21-3Q3LHN1 58 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 SP6Q3SY56 376 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 ARSJQ5FYB0 599 aaPredicted RBP9.41□□□□□ -0.9
LINC00339-205ENST00000452322 OR4A47Q6IF82 309 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 SSX9Q7RTT3 188 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 SLC35E3Q7Z769 313 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 CADM3Q8N126 398 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 DMBX1Q8NFW5 382 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 OR4A5Q8NH83 315 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 ENKURQ8TC29 256 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 GLYATL2Q8WU03 294 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 OR2A7Q96R45 310 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 HSPB9Q9BQS6 159 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 FLVCR2Q9UPI3 526 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 MMP24Q9Y5R2 645 aa9.41□□□□□ -0.9
LINC00339-205ENST00000452322 ATG12O94817 140 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 CDS2O95674 445 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 CA2P00918 260 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 IGKV1-39P01597 117 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 IGKV1D-39P04432 117 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 MDKP21741 143 aaPredicted RBP9.4□□□□□ -0.9
LINC00339-205ENST00000452322 VDAC2P45880 294 aaPredicted RBP9.4□□□□□ -0.9
LINC00339-205ENST00000452322 COMPP49747 757 aaPredicted RBP9.4□□□□□ -0.9
LINC00339-205ENST00000452322 PPP1R1AQ13522 171 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 TMEM187Q14656 261 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 PRSS8Q16651 343 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 MRGPRG-AS1Q2M3A8 158 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms