RNA–Protein interactions for RNA: ENST00000451349.1

SSXP4-201, Transcript of SSX family pseudogene 4, humanhuman

BASIC

Gene SSXP4, Length 245 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP4-201ENST00000451349 RAB5CP51148 216 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 NANOS2P60321 138 aaKnown RBP2.57□□□□□ -2
SSXP4-201ENST00000451349 RPL23P62829 140 aaKnown RBP2.57□□□□□ -2
SSXP4-201ENST00000451349 SLC38A11Q08AI6 406 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 ORMDL2Q53FV1 153 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 ZNF773Q6PK81 442 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 Q6ZS49 121 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 GTF2H5Q6ZYL4 71 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 TMUB2Q71RG4 321 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 SLC22A24Q8N4F4 322 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 CSNK1G2-AS1Q8NCQ2 148 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 PPTC7Q8NI37 304 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 RTN4IP1Q8WWV3 396 aaPredicted RBP2.57□□□□□ -2
SSXP4-201ENST00000451349 KCNS1Q96KK3 526 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 F2RL3Q96RI0 385 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 MGLLQ99685 303 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 SLC25A21Q9BQT8 299 aaPredicted RBP2.57□□□□□ -2
SSXP4-201ENST00000451349 GTSF1LQ9H1H1 148 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 MED28Q9H204 178 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 RERGLQ9H628 205 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 FBXL12Q9NXK8 326 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 METTL1Q9UBP6 276 aaKnown RBP2.57□□□□□ -2
SSXP4-201ENST00000451349 CYSLTR1Q9Y271 337 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 AMMECR1Q9Y4X0 333 aaPredicted RBP2.57□□□□□ -2
SSXP4-201ENST00000451349 V9GYS6 101 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 TDRD15B5MCY1 1934 aaKnown RBP2.57□□□□□ -2
SSXP4-201ENST00000451349 ANKRD36BQ8N2N9 1353 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 TECPR2O15040 1411 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 FMN1Q68DA7 1419 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 ABCC10Q5T3U5 1492 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 ARHGEF11O15085 1522 aa2.57□□□□□ -2
SSXP4-201ENST00000451349 DNMT1P26358 1616 aaKnown RBP2.57□□□□□ -2
SSXP4-201ENST00000451349 IGKV1-27A0A075B6S5 117 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 TRAV9-1A0A075B6T8 112 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 LOC102724200A0A096LPH7 203 aaPredicted RBP2.56□□□□□ -2
SSXP4-201ENST00000451349 TRAV19A0A0A6YYK7 116 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 LINC00862A6NCI5 91 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 EPOPA6NHQ4 379 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 ZNF705GA8MUZ8 300 aaPredicted RBP2.56□□□□□ -2
SSXP4-201ENST00000451349 MPTX1A8MV57 137 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 A8MWP6 167 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 C9JQL5 133 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 M0R381 172 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 PEX7O00628 323 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 SNAPC5O75971 98 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 IGHV3-48P01763 117 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 PAEPP09466 180 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 AKAIN1P0CW23 69 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 HIST1H1DP16402 221 aaKnown RBP2.56□□□□□ -2
SSXP4-201ENST00000451349 CSRP1P21291 193 aaKnown RBP2.56□□□□□ -2
SSXP4-201ENST00000451349 IMPA1P29218 277 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 CASP1P29466 404 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 OPRM1P35372 400 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 POLR2IP36954 125 aaKnown RBP2.56□□□□□ -2
SSXP4-201ENST00000451349 OPRK1P41145 380 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 CA7P43166 264 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 RPS11P62280 158 aaKnown RBP eCLIP2.56□□□□□ -2
SSXP4-201ENST00000451349 FKBP1AP62942 108 aaKnown RBP2.56□□□□□ -2
SSXP4-201ENST00000451349 CRADDP78560 199 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 HOXC5Q00444 222 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 RTL8BQ17RB0 113 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 PRR30Q53SZ7 412 aaPredicted RBP2.56□□□□□ -2
SSXP4-201ENST00000451349 PABPC1L2AQ5JQF8 200 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 NHLRC3Q5JS37 347 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 BCL2L15Q5TBC7 163 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 FAM53AQ6NSI3 398 aaPredicted RBP2.56□□□□□ -2
SSXP4-201ENST00000451349 GLIPR1L1Q6UWM5 242 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 LRP11Q86VZ4 500 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 PRR15Q8IV56 129 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 MKXQ8IYA7 352 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 C1orf174Q8IYL3 243 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 TMEM61Q8N0U2 210 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 C9orf62Q8N4C0 152 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 C11orf42Q8N5U0 333 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 DRAM1Q8N682 238 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 ZNF709Q8N972 641 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.56□□□□□ -2
SSXP4-201ENST00000451349 OR4S1Q8NGB4 309 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 OR51A4Q8NGJ6 313 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 OR10D4PQ8NGN7 298 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 PP6455Q8WZ26 134 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 BORCS8Q96FH0 119 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 PRAC1Q96KF2 57 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 CCL13Q99616 98 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 NRTNQ99748 197 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 ZNF436Q9C0F3 470 aaPredicted RBP2.56□□□□□ -2
SSXP4-201ENST00000451349 LINC00597Q9H2U6 94 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 ZNF556Q9HAH1 456 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 CCL28Q9NRJ3 127 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 ZNF580Q9UK33 172 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 PCTPQ9UKL6 214 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 KLK13Q9UKR3 277 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 BOKQ9UMX3 212 aaPredicted RBP2.56□□□□□ -2
SSXP4-201ENST00000451349 FLVCR1Q9Y5Y0 555 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 TMEM2Q9UHN6 1383 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 BCL9LQ86UU0 1499 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 HECW2Q9P2P5 1572 aa2.56□□□□□ -2
SSXP4-201ENST00000451349 IGLV4-3A0A075B6K6 122 aa2.55□□□□□ -2
SSXP4-201ENST00000451349 IGHV3OR16-10A0A075B7F0 116 aa2.55□□□□□ -2
SSXP4-201ENST00000451349 CCL15-CCL14A0A0B4J2E2 113 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms