RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 IGKV3-20P01619 116 aa11.96□□□□□ -0.5
RAPGEF3-205ENST00000449771 VSIG10L2P0DP72 767 aa11.96□□□□□ -0.5
RAPGEF3-205ENST00000449771 CNTRLQ7Z7A1 2325 aa11.96□□□□□ -0.5
RAPGEF3-205ENST00000449771 TMEM252Q8N6L7 170 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 PGLYRP4Q96LB8 373 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 TRIP12Q14669 1992 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 CELA3AP09093 270 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 GPHA2Q96T91 129 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 ZNF703Q9H7S9 590 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 KCNE5Q9UJ90 142 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 COL11A2P13942 1736 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 MARCH11A6NNE9 402 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 IGHV3-23P01764 117 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 IGHMP01871 453 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 TRGV3P03979 118 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 TIMM23BQ5SRD1 257 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 C12orf54Q6X4T0 127 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 RFPL3SP0C7P2 107 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 PEAR1Q5VY43 1037 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 SGMS2Q8NHU3 365 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 SCARF2Q96GP6 870 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 TMEM106BQ9NUM4 274 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 ZNF883P0CG24 379 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 TMEM30BQ3MIR4 351 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 OR5P3Q8WZ94 311 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 FAM168AQ92567 244 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 GALNT14Q96FL9 552 aa11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 RGPD3A6NKT7 1758 aaPredicted RBP11.95□□□□□ -0.5
RAPGEF3-205ENST00000449771 A0A0B4J293 547 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 ZG16O60844 167 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 IFI6P09912 130 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 CTAG1AP78358 180 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 YAE1D1Q9NRH1 226 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 NPBWR2P48146 333 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 AQP3Q92482 292 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 WFDC6Q9BQY6 131 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 ATAD5Q96QE3 1844 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 TNS1Q9HBL0 1735 aaKnown RBP11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 F5P12259 2224 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 TMEM262E9PQX1 116 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 H7C2G1 150 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 RNASE1P07998 156 aaKnown RBP11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 ZNF56Q15929 161 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 DLX6P56179 175 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 BSPH1Q075Z2 132 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 FAM74A4Q5TZK3 123 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 GPR82Q96P67 336 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 CDC42EP3Q9UKI2 254 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 COL5A3P25940 1745 aaPredicted RBP11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 TDRD15B5MCY1 1934 aaKnown RBP11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 H3BTX0 84 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 RAB9AP51151 201 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 RPS20P60866 119 aaKnown RBP11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 C2orf83Q53S99 150 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 CYB561D1Q8N8Q1 229 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 FAM57AQ8TBR7 257 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 G6PC2Q9NQR9 355 aa11.94□□□□□ -0.5
RAPGEF3-205ENST00000449771 IGKV1D-42A0A075B6H8 117 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 NEU4Q8WWR8 484 aaPredicted RBP11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 ZNRF1Q8ND25 227 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 OR11H4Q8NGC9 324 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 GPR132Q9UNW8 380 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 IGHV3-35A0A0C4DH35 117 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 TNFRSF9Q07011 255 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 PQLC2Q6ZP29 291 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 TAF15Q92804 592 aaKnown RBP eCLIP11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 TMEM45BQ96B21 275 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 RAXQ9Y2V3 346 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 ANKRD31Q8N7Z5 1873 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 CRYBA2P53672 197 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 IGLV3-21P80748 117 aaPredicted RBP11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 HIST1H1AQ02539 215 aaPredicted RBP11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 LINC00470Q9BZP3 86 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 TUBD1Q9UJT1 453 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 MIA3Q5JRA6 1907 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 GDF9O60383 454 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 ZIC3O60481 467 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 TRGC1P0CF51 173 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 TMEM177Q53S58 311 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 LURAP1LQ8IV03 231 aa11.93□□□□□ -0.5
RAPGEF3-205ENST00000449771 ZNF146Q15072 292 aa11.92□□□□□ -0.5
RAPGEF3-205ENST00000449771 Q96M66 194 aa11.92□□□□□ -0.5
RAPGEF3-205ENST00000449771 SMDT1Q9H4I9 107 aa11.92□□□□□ -0.5
RAPGEF3-205ENST00000449771 NPFFO15130 113 aa11.92□□□□□ -0.5
RAPGEF3-205ENST00000449771 C1orf100Q5SVJ3 147 aa11.92□□□□□ -0.5
RAPGEF3-205ENST00000449771 MAP1LC3AQ9H492 121 aa11.92□□□□□ -0.5
RAPGEF3-205ENST00000449771 SCN4AP35499 1836 aa11.92□□□□□ -0.5
RAPGEF3-205ENST00000449771 TRBV5-7A0A0A0MS05 114 aa11.92□□□□□ -0.5
RAPGEF3-205ENST00000449771 ARL14EPLP0DKL9 152 aa11.92□□□□□ -0.5
RAPGEF3-205ENST00000449771 C10orf128Q5T292 105 aa11.92□□□□□ -0.5
RAPGEF3-205ENST00000449771 ZNF818PQ6ZRF7 136 aa11.92□□□□□ -0.5
RAPGEF3-205ENST00000449771 CTHRC1Q96CG8 243 aa11.92□□□□□ -0.5
RAPGEF3-205ENST00000449771 CACNA1CQ13936 2221 aa11.91□□□□□ -0.5
RAPGEF3-205ENST00000449771 IGHV3-66A0A0C4DH42 116 aa11.91□□□□□ -0.5
RAPGEF3-205ENST00000449771 A0A1W2PRX2 142 aa11.91□□□□□ -0.5
RAPGEF3-205ENST00000449771 IGHV3-48P01763 117 aa11.91□□□□□ -0.5
RAPGEF3-205ENST00000449771 HLA-DQB1P01920 261 aa11.91□□□□□ -0.5
RAPGEF3-205ENST00000449771 C8orf88P0DMB2 117 aa11.91□□□□□ -0.5
RAPGEF3-205ENST00000449771 GLRXP35754 106 aa11.91□□□□□ -0.5
RAPGEF3-205ENST00000449771 P2RY4P51582 365 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms