RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TCTEX1D2Q8WW35 142 aa11.76□□□□□ -0.53
CHD3-205ENST00000449744 HSD17B10Q99714 261 aaKnown RBP11.76□□□□□ -0.53
CHD3-205ENST00000449744 SPATA2Q9UM82 520 aa11.76□□□□□ -0.53
CHD3-205ENST00000449744 SMAD5-AS1Q9Y6J3 95 aa11.76□□□□□ -0.53
CHD3-205ENST00000449744 A0A087WXM4 84 aa11.75□□□□□ -0.53
CHD3-205ENST00000449744 AIREO43918 545 aa11.75□□□□□ -0.53
CHD3-205ENST00000449744 BRI3O95415 125 aa11.75□□□□□ -0.53
CHD3-205ENST00000449744 OR9G9P0C7N8 305 aa11.75□□□□□ -0.53
CHD3-205ENST00000449744 FCGR2CP31995 323 aa11.75□□□□□ -0.53
CHD3-205ENST00000449744 RPL30P62888 115 aaKnown RBP11.75□□□□□ -0.53
CHD3-205ENST00000449744 MRGPRG-AS1Q2M3A8 158 aa11.75□□□□□ -0.53
CHD3-205ENST00000449744 OVCH2Q7RTZ1 564 aa11.75□□□□□ -0.53
CHD3-205ENST00000449744 HOGA1Q86XE5 327 aa11.75□□□□□ -0.53
CHD3-205ENST00000449744 MMD2Q8IY49 270 aa11.75□□□□□ -0.53
CHD3-205ENST00000449744 GVQW1Q8N7I0 195 aa11.75□□□□□ -0.53
CHD3-205ENST00000449744 OR4S2Q8NH73 311 aa11.75□□□□□ -0.53
CHD3-205ENST00000449744 USMG5Q96IX5 58 aa11.75□□□□□ -0.53
CHD3-205ENST00000449744 RSRP1Q9BUV0 290 aa11.75□□□□□ -0.53
CHD3-205ENST00000449744 AUNIPQ9H7T9 357 aa11.75□□□□□ -0.53
CHD3-205ENST00000449744 ZNF430Q9H8G1 570 aaPredicted RBP11.75□□□□□ -0.53
CHD3-205ENST00000449744 TAS2R8Q9NYW2 309 aa11.75□□□□□ -0.53
CHD3-205ENST00000449744 IGLV2-14P01704 120 aa11.74□□□□□ -0.53
CHD3-205ENST00000449744 SPNP16150 400 aa11.74□□□□□ -0.53
CHD3-205ENST00000449744 CBX5P45973 191 aa11.74□□□□□ -0.53
CHD3-205ENST00000449744 DEFA5Q01523 94 aa11.74□□□□□ -0.53
CHD3-205ENST00000449744 ZNF66Q6ZN08 573 aa11.74□□□□□ -0.53
CHD3-205ENST00000449744 MFSD4AQ8N468 514 aa11.74□□□□□ -0.53
CHD3-205ENST00000449744 TSPAN14Q8NG11 270 aa11.74□□□□□ -0.53
CHD3-205ENST00000449744 VSTM2AQ8TAG5 236 aa11.74□□□□□ -0.53
CHD3-205ENST00000449744 SECTM1Q8WVN6 248 aa11.74□□□□□ -0.53
CHD3-205ENST00000449744 S100A16Q96FQ6 103 aaKnown RBP11.74□□□□□ -0.53
CHD3-205ENST00000449744 SPIN2AQ99865 258 aa11.74□□□□□ -0.53
CHD3-205ENST00000449744 SPIN2BQ9BPZ2 258 aa11.74□□□□□ -0.53
CHD3-205ENST00000449744 PEF1Q9UBV8 284 aaKnown RBP11.74□□□□□ -0.53
CHD3-205ENST00000449744 OR2A4O95047 310 aa11.73□□□□□ -0.53
CHD3-205ENST00000449744 TNFAIP8O95379 198 aa11.73□□□□□ -0.53
CHD3-205ENST00000449744 FCER2P06734 321 aa11.73□□□□□ -0.53
CHD3-205ENST00000449744 GP9P14770 177 aa11.73□□□□□ -0.53
CHD3-205ENST00000449744 LSM3P62310 102 aaKnown RBP11.73□□□□□ -0.53
CHD3-205ENST00000449744 TATDN3Q17R31 274 aa11.73□□□□□ -0.53
CHD3-205ENST00000449744 ANKRD13BQ86YJ7 626 aa11.73□□□□□ -0.53
CHD3-205ENST00000449744 VKORC1L1Q8N0U8 176 aa11.73□□□□□ -0.53
CHD3-205ENST00000449744 ADAD2Q8NCV1 583 aaKnown RBP11.73□□□□□ -0.53
CHD3-205ENST00000449744 OR13F1Q8NGS4 319 aa11.73□□□□□ -0.53
CHD3-205ENST00000449744 WWC2-AS2Q96NR7 200 aa11.73□□□□□ -0.53
CHD3-205ENST00000449744 OR2A7Q96R45 310 aa11.73□□□□□ -0.53
CHD3-205ENST00000449744 ASCL2Q99929 193 aa11.73□□□□□ -0.53
CHD3-205ENST00000449744 IFT46Q9NQC8 304 aa11.73□□□□□ -0.53
CHD3-205ENST00000449744 CCL28Q9NRJ3 127 aa11.73□□□□□ -0.53
CHD3-205ENST00000449744 TNFSF12O43508 249 aa11.72□□□□□ -0.53
CHD3-205ENST00000449744 HRASP01112 189 aa11.72□□□□□ -0.53
CHD3-205ENST00000449744 PPYP01298 95 aa11.72□□□□□ -0.53
CHD3-205ENST00000449744 PTHLHP12272 177 aa11.72□□□□□ -0.53
CHD3-205ENST00000449744 TGFBR1P36897 503 aa11.72□□□□□ -0.53
CHD3-205ENST00000449744 KIR2DS2P43631 304 aa11.72□□□□□ -0.53
CHD3-205ENST00000449744 DYRK1AQ13627 763 aa11.72□□□□□ -0.53
CHD3-205ENST00000449744 C10orf55Q5SWW7 151 aa11.72□□□□□ -0.53
CHD3-205ENST00000449744 ZNF343Q6P1L6 599 aa11.72□□□□□ -0.53
CHD3-205ENST00000449744 SLC25A42Q86VD7 318 aa11.72□□□□□ -0.53
CHD3-205ENST00000449744 ZBTB34Q8NCN2 500 aa11.72□□□□□ -0.53
CHD3-205ENST00000449744 YIPF6Q96EC8 236 aa11.72□□□□□ -0.53
CHD3-205ENST00000449744 U3KQK5 164 aa11.72□□□□□ -0.53
CHD3-205ENST00000449744 NBEAL2Q6ZNJ1 2754 aa11.72□□□□□ -0.53
CHD3-205ENST00000449744 MEIS3P1A6NDR6 274 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 FAM223BA6NKX1 122 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 XRCC3O43542 346 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 KBTBD11O94819 623 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 RPS19P39019 145 aaKnown RBP11.71□□□□□ -0.53
CHD3-205ENST00000449744 FXYD4P59646 89 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 RHOGP84095 191 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 ATP5G2Q06055 141 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 CATR1Q13166 79 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 EIF4EBP1Q13541 118 aaPredicted RBP11.71□□□□□ -0.53
CHD3-205ENST00000449744 MSMO1Q15800 293 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 RPEL1Q2QD12 228 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 UBE2NLQ5JXB2 153 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 FAM223AQ8IWN6 122 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 OR5AP2Q8NGF4 316 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 OR9G4Q8NGQ1 327 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 SNAPC3Q92966 411 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 AIFM2Q9BRQ8 373 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 SLC5A7Q9GZV3 580 aa11.71□□□□□ -0.53
CHD3-205ENST00000449744 SORL1Q92673 2214 aa11.71□□□□□ -0.54
CHD3-205ENST00000449744 DPPA5A6NC42 116 aa11.7□□□□□ -0.54
CHD3-205ENST00000449744 PRH1P02810 166 aa11.7□□□□□ -0.54
CHD3-205ENST00000449744 MAS1LP35410 378 aa11.7□□□□□ -0.54
CHD3-205ENST00000449744 RPL27AP46776 148 aaKnown RBP11.7□□□□□ -0.54
CHD3-205ENST00000449744 SYNJ2BPP57105 145 aa11.7□□□□□ -0.54
CHD3-205ENST00000449744 KLF5Q13887 457 aaPredicted RBP11.7□□□□□ -0.54
CHD3-205ENST00000449744 TMEM69Q5SWH9 247 aa11.7□□□□□ -0.54
CHD3-205ENST00000449744 SSX9Q7RTT3 188 aa11.7□□□□□ -0.54
CHD3-205ENST00000449744 HAPLN4Q86UW8 402 aa11.7□□□□□ -0.54
CHD3-205ENST00000449744 SPAG16Q8N0X2 631 aa11.7□□□□□ -0.54
CHD3-205ENST00000449744 TTC9CQ8N5M4 171 aa11.7□□□□□ -0.54
CHD3-205ENST00000449744 SAMD12Q8N8I0 201 aa11.7□□□□□ -0.54
CHD3-205ENST00000449744 TMEM167AQ8TBQ9 72 aa11.7□□□□□ -0.54
CHD3-205ENST00000449744 GIMAP1Q8WWP7 306 aa11.7□□□□□ -0.54
CHD3-205ENST00000449744 FYTTD1Q96QD9 318 aaKnown RBP11.7□□□□□ -0.54
CHD3-205ENST00000449744 GPHA2Q96T91 129 aa11.7□□□□□ -0.54
CHD3-205ENST00000449744 AKIP1Q9NQ31 210 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms