RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 AKIRIN2Q53H80 203 aa9.39□□□□□ -0.91
AC004540.1-204ENST00000449537 PAN3Q58A45 887 aaKnown RBP9.39□□□□□ -0.91
AC004540.1-204ENST00000449537 SLC25A48Q6ZT89 311 aaKnown RBP9.39□□□□□ -0.91
AC004540.1-204ENST00000449537 PPP1R27Q86WC6 154 aa9.39□□□□□ -0.91
AC004540.1-204ENST00000449537 RIMS4Q9H426 269 aaPredicted RBP9.39□□□□□ -0.91
AC004540.1-204ENST00000449537 ZNF355PQ9NSJ1 428 aa9.39□□□□□ -0.91
AC004540.1-204ENST00000449537 APLNQ9ULZ1 77 aa9.39□□□□□ -0.91
AC004540.1-204ENST00000449537 A0A1W2PP11 408 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 MCRIP1C9JLW8 97 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 ZNF137PP52743 207 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 MRPS10P82664 201 aaKnown RBP9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 RBMS2Q15434 407 aaKnown RBP9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 HACD4Q5VWC8 232 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 TRAT1Q6PIZ9 186 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 MOB1BQ7L9L4 216 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 ZNF554Q86TJ5 538 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 NPBQ8NG41 125 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 OR10R2Q8NGX6 335 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 SETD6Q8TBK2 473 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 RAB3CQ96E17 227 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 MFFQ9GZY8 342 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 ATG5Q9H1Y0 275 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 MIXL1Q9H2W2 232 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 BANF2Q9H503 90 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 RAB9BQ9NP90 201 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 SCRT2Q9NQ03 307 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 MBNL3Q9NUK0 354 aaKnown RBP9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 FBXL17Q9UF56 701 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 MGAT4AQ9UM21 535 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 V9GYH0 126 aa9.38□□□□□ -0.91
AC004540.1-204ENST00000449537 DNAH6Q9C0G6 4158 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 A0A0B4J203 849 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 FOXI3A8MTJ6 420 aaPredicted RBP9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 RAB27BO00194 218 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 OR2A4O95047 310 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 HIST1H1DP16402 221 aaKnown RBP9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 ELK1P19419 428 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 NANOS2P60321 138 aaKnown RBP9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 MRPS15P82914 257 aaKnown RBP9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 RBMY1FQ15415 496 aaKnown RBP9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 RPEL1Q2QD12 228 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 TRIM16LQ309B1 348 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 DEFB135Q30KP9 77 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 DEFB114Q30KQ6 69 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 TMEM30BQ3MIR4 351 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 TMEM69Q5SWH9 247 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 RSBN1Q5VWQ0 802 aaPredicted RBP9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 OR10K2Q6IF99 312 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 LFNGQ8NES3 379 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 OR5H6Q8NGV6 325 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 DYNLRB2Q8TF09 96 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 ARL11Q969Q4 196 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 DPCDQ9BVM2 203 aaPredicted RBP9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 SRRQ9GZT4 340 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 C12orf4Q9NQ89 552 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 PLEKHJ1Q9NW61 149 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 GFOD1Q9NXC2 390 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 PEF1Q9UBV8 284 aaKnown RBP9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 FBXL7Q9UJT9 491 aa9.37□□□□□ -0.91
AC004540.1-204ENST00000449537 DNAH17Q9UFH2 4485 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 IGHV3-43A0A0B4J1X8 118 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 TRAV24A0A0B4J272 114 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 IGLL5B9A064 214 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 MFNGO00587 321 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 UBE2CO00762 179 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 SHOXO15266 292 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 SLC31A2O15432 143 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 LANCL1O43813 399 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 PTTG1O95997 202 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 EIF4EP06730 217 aaKnown RBP9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 IGHV3-43DP0DP04 118 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 APOC4P55056 127 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 Q3ZCU0 254 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 TMEM177Q53S58 311 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 ATAD3CQ5T2N8 411 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 GAPTQ8N292 157 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 ZNF645Q8N7E2 425 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 SUMF2Q8NBJ7 301 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 C11orf45Q8TAV5 145 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 NEK7Q8TDX7 302 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 NICN1Q9BSH3 213 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 FAM103A1Q9BTL3 118 aaKnown RBP9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 KCNK15Q9H427 330 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 SCPEP1Q9HB40 452 aa9.36□□□□□ -0.91
AC004540.1-204ENST00000449537 A0A0A6YYD4 124 aa9.35□□□□□ -0.91
AC004540.1-204ENST00000449537 TRBV6-6A0A0A6YYG2 114 aa9.35□□□□□ -0.91
AC004540.1-204ENST00000449537 TMEM30CPA0ZSE6 113 aa9.35□□□□□ -0.91
AC004540.1-204ENST00000449537 M0R2N4 97 aa9.35□□□□□ -0.91
AC004540.1-204ENST00000449537 SULT1C2O00338 296 aa9.35□□□□□ -0.91
AC004540.1-204ENST00000449537 FCN1O00602 326 aa9.35□□□□□ -0.91
AC004540.1-204ENST00000449537 NDUFA3O95167 84 aa9.35□□□□□ -0.91
AC004540.1-204ENST00000449537 DIRAS3O95661 229 aa9.35□□□□□ -0.91
AC004540.1-204ENST00000449537 DTYMKP23919 212 aa9.35□□□□□ -0.91
AC004540.1-204ENST00000449537 KIR2DS2P43631 304 aa9.35□□□□□ -0.91
AC004540.1-204ENST00000449537 CBX5P45973 191 aa9.35□□□□□ -0.91
AC004540.1-204ENST00000449537 ZNF134P52741 427 aa9.35□□□□□ -0.91
AC004540.1-204ENST00000449537 AP3S2P59780 193 aa9.35□□□□□ -0.91
AC004540.1-204ENST00000449537 SIGIRRQ6IA17 410 aa9.35□□□□□ -0.91
AC004540.1-204ENST00000449537 MZT2BQ6NZ67 158 aa9.35□□□□□ -0.91
AC004540.1-204ENST00000449537 UBALD1Q8TB05 177 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms