RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PLGLAQ15195 96 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 ATP6V1FQ16864 119 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 SSX8Q7RTT4 187 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 SCCPDHQ8NBX0 429 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 OCC1Q8TAD7 63 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 FAM122AQ96E09 287 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.5□□□□□ -0.734e-6■■□□□ 13.5
UBE3B-204ENST00000449510 VPS13AQ96RL7 3174 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 UBE2L3P68036 154 aaKnown RBP10.5□□□□□ -0.73
UBE3B-204ENST00000449510 NMSQ5H8A3 153 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 MUC15Q8N387 334 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 LILRA1O75019 489 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 CGAP01215 116 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 CCL1P22362 96 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 ZNF726P1Q15940 193 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 ZNF738Q8NE65 137 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 TAAR6Q96RI8 345 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 PCDH15Q96QU1 1955 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 PLXNA2O75051 1894 aa10.5□□□□□ -0.73
UBE3B-204ENST00000449510 NPIPB13A6NJU9 1138 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 MARCH11A6NNE9 402 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 NPIPB4C9JG80 1138 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 MT-CO3P00414 261 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 CDKN1AP38936 164 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 DUSP3P51452 185 aaPredicted RBP10.49□□□□□ -0.73
UBE3B-204ENST00000449510 OR4A47Q6IF82 309 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 DCAF16Q9NXF7 216 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 POLR3KQ9Y2Y1 108 aaPredicted RBP10.49□□□□□ -0.73
UBE3B-204ENST00000449510 DPRXA6NFQ7 191 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 B4E171 279 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 TOX3O15405 576 aaPredicted RBP10.49□□□□□ -0.73
UBE3B-204ENST00000449510 APCSP02743 223 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 TSPAN7P41732 249 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 RSPO1Q2MKA7 263 aaPredicted RBP10.49□□□□□ -0.73
UBE3B-204ENST00000449510 MDP1Q86V88 176 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 LRTM2Q8N967 370 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 SLC25A40Q8TBP6 338 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 RNF2Q99496 336 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 COMMD5Q9GZQ3 224 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 SIT1Q9Y3P8 196 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 IGKV1D-33P01593 117 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 IGKV1-33P01594 117 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 IGKV1-5P01602 117 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 REG1BP48304 166 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 GNB1P62873 340 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 RELBQ01201 579 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 LHFPL4Q7Z7J7 247 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 GBGT1Q8N5D6 347 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 ZIC4Q8N9L1 334 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 NFAM1Q8NET5 270 aaPredicted RBP10.49□□□□□ -0.73
UBE3B-204ENST00000449510 OR2Y1Q8NGV0 311 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 SIGLEC12Q96PQ1 595 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 SH2D2AQ9NP31 389 aa10.49□□□□□ -0.73
UBE3B-204ENST00000449510 COL6A6A6NMZ7 2263 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 OR5B21A6NL26 309 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 LRRC30A6NM36 301 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 J3QT63 122 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 CFPP27918 469 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 PAFAH1B2P68402 229 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 RPL24P83731 157 aaKnown RBP10.48□□□□□ -0.73
UBE3B-204ENST00000449510 LEMD1Q68G75 181 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 LRRC29Q8WV35 223 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 MIEN1Q9BRT3 115 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 MCRIP2Q9BUT9 160 aaKnown RBP10.48□□□□□ -0.73
UBE3B-204ENST00000449510 UQCR10Q9UDW1 63 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 COX7A2P2O60397 106 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 PAX9P55771 341 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 OR1C1Q15619 314 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 C10orf128Q5T292 105 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 PLPPR1Q8TBJ4 325 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 NABP1Q96AH0 204 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 PSMG3Q9BT73 122 aaPredicted RBP10.48□□□□□ -0.73
UBE3B-204ENST00000449510 SSBP4Q9BWG4 385 aaPredicted RBP10.48□□□□□ -0.73
UBE3B-204ENST00000449510 STRADBQ9C0K7 418 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 USP34Q70CQ2 3546 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 IGKV1-6A0A0C4DH72 117 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 CXorf1O96002 111 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 PFN1P07737 140 aaKnown RBP10.48□□□□□ -0.73
UBE3B-204ENST00000449510 SRFP11831 508 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 CCL11P51671 97 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 ZNF441Q8N8Z8 693 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 SLC35E1Q96K37 410 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 SF3B5Q9BWJ5 86 aaKnown RBP10.48□□□□□ -0.73
UBE3B-204ENST00000449510 NRN1Q9NPD7 142 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 ZNF355PQ9NSJ1 428 aa10.48□□□□□ -0.73
UBE3B-204ENST00000449510 CELSR3Q9NYQ7 3312 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 NUPR1O60356 82 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 CD99P14209 185 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 TDGF1P3P51864 188 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 TAS2R45P59539 299 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 LYPD6Q86Y78 171 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 LAMTOR5O43504 91 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 SLC25A5P05141 298 aaKnown RBP10.47□□□□□ -0.73
UBE3B-204ENST00000449510 OPRK1P41145 380 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 CENPWQ5EE01 88 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 OR8G5Q8NG78 346 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 RAB37Q96AX2 223 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 FLYWCH2Q96CP2 140 aaKnown RBP10.47□□□□□ -0.73
UBE3B-204ENST00000449510 SSUH2Q9Y2M2 353 aa10.47□□□□□ -0.73
UBE3B-204ENST00000449510 MPC1Q9Y5U8 109 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms