RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 RPL27P61353 136 aaKnown RBP9.03□□□□□ -0.96
LINC00342-202ENST00000448494 C22orf39Q6P5X5 142 aa9.03□□□□□ -0.96
LINC00342-202ENST00000448494 RASL11AQ6T310 242 aa9.03□□□□□ -0.96
LINC00342-202ENST00000448494 TBC1D26Q86UD7 250 aa9.03□□□□□ -0.96
LINC00342-202ENST00000448494 OR2T6Q8NHC8 308 aa9.03□□□□□ -0.96
LINC00342-202ENST00000448494 OVCA2Q8WZ82 227 aa9.03□□□□□ -0.96
LINC00342-202ENST00000448494 TMEM54Q969K7 222 aa9.03□□□□□ -0.96
LINC00342-202ENST00000448494 VPREB3Q9UKI3 123 aa9.03□□□□□ -0.96
LINC00342-202ENST00000448494 CACNA1CQ13936 2221 aa9.03□□□□□ -0.96
LINC00342-202ENST00000448494 THBDP07204 575 aa9.02□□□□□ -0.96
LINC00342-202ENST00000448494 ATP5G3P48201 142 aa9.02□□□□□ -0.96
LINC00342-202ENST00000448494 ATP5G2Q06055 141 aa9.02□□□□□ -0.96
LINC00342-202ENST00000448494 KIR3DL3Q8N743 410 aa9.02□□□□□ -0.96
LINC00342-202ENST00000448494 NAA38Q9BRA0 125 aaKnown RBP9.02□□□□□ -0.96
LINC00342-202ENST00000448494 KLF16Q9BXK1 252 aaPredicted RBP9.02□□□□□ -0.96
LINC00342-202ENST00000448494 VCX2Q9H322 139 aa9.02□□□□□ -0.96
LINC00342-202ENST00000448494 PSENENQ9NZ42 101 aa9.02□□□□□ -0.96
LINC00342-202ENST00000448494 OR2W1Q9Y3N9 320 aa9.02□□□□□ -0.96
LINC00342-202ENST00000448494 UBE2L5PA0A1B0GUS4 154 aa9.02□□□□□ -0.97
LINC00342-202ENST00000448494 DLL1O00548 723 aa9.02□□□□□ -0.97
LINC00342-202ENST00000448494 SNAI2O43623 268 aa9.02□□□□□ -0.97
LINC00342-202ENST00000448494 DXOO77932 396 aaKnown RBP9.02□□□□□ -0.97
LINC00342-202ENST00000448494 CEACAM5P06731 702 aa9.02□□□□□ -0.97
LINC00342-202ENST00000448494 KIR2DL2P43627 348 aaPredicted RBP9.02□□□□□ -0.97
LINC00342-202ENST00000448494 GNG3P63215 75 aa9.02□□□□□ -0.97
LINC00342-202ENST00000448494 FAM53BQ14153 422 aa9.02□□□□□ -0.97
LINC00342-202ENST00000448494 GCSAMLQ5JQS6 135 aa9.02□□□□□ -0.97
LINC00342-202ENST00000448494 FAM120AOSQ5T036 256 aa9.02□□□□□ -0.97
LINC00342-202ENST00000448494 Q6ZS49 121 aa9.02□□□□□ -0.97
LINC00342-202ENST00000448494 WDR5BQ86VZ2 330 aa9.02□□□□□ -0.97
LINC00342-202ENST00000448494 OOSP2Q86WS3 158 aa9.02□□□□□ -0.97
LINC00342-202ENST00000448494 TUSC5Q8IXB3 177 aa9.02□□□□□ -0.97
LINC00342-202ENST00000448494 RAB42Q8N4Z0 105 aa9.02□□□□□ -0.97
LINC00342-202ENST00000448494 RERGQ96A58 199 aaPredicted RBP9.02□□□□□ -0.97
LINC00342-202ENST00000448494 SH2D2AQ9NP31 389 aa9.02□□□□□ -0.97
LINC00342-202ENST00000448494 TRAV25A0A0B4J276 109 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 ZNF840PA6NDX5 716 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 K7EN84 100 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 BNIP3LO60238 219 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 NXPH3O95157 252 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 FAM69BQ5VUD6 431 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 RNASEKQ6P5S7 137 aaKnown RBP9.01□□□□□ -0.97
LINC00342-202ENST00000448494 TMEM25Q86YD3 366 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 WIPF2Q8TF74 440 aaPredicted RBP9.01□□□□□ -0.97
LINC00342-202ENST00000448494 TMEM204Q9BSN7 226 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 CDIP1Q9H305 208 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 GCM1Q9NP62 436 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 KIAA1549LQ6ZVL6 1849 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 TNRC6AQ8NDV7 1962 aaKnown RBP9.01□□□□□ -0.97
LINC00342-202ENST00000448494 DOCK11Q5JSL3 2073 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 A0A087WX48 190 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 MANSC4A6NHS7 340 aaPredicted RBP9.01□□□□□ -0.97
LINC00342-202ENST00000448494 SYNGR2O43760 224 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 KLF7O75840 302 aaPredicted RBP9.01□□□□□ -0.97
LINC00342-202ENST00000448494 PPYP01298 95 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 ATP5IP56385 69 aaPredicted RBP9.01□□□□□ -0.97
LINC00342-202ENST00000448494 CA13Q8N1Q1 262 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 OR4X2Q8NGF9 303 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 ZNF502Q8TBZ5 544 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 SOCS4Q8WXH5 440 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 RDH5Q92781 318 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 B4GALT7Q9UBV7 327 aa9.01□□□□□ -0.97
LINC00342-202ENST00000448494 TCF20Q9UGU0 1960 aaKnown RBP9.01□□□□□ -0.97
LINC00342-202ENST00000448494 F5H5K5 113 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 DLX2Q07687 328 aaPredicted RBP9□□□□□ -0.97
LINC00342-202ENST00000448494 SLC38A11Q08AI6 406 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 WFDC2Q14508 124 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 OR8B8Q15620 311 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 KISS1Q15726 138 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 MLF2Q15773 248 aaPredicted RBP9□□□□□ -0.97
LINC00342-202ENST00000448494 CEACAM16Q2WEN9 425 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 CTXN3Q4LDR2 81 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 PARM1Q6UWI2 310 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 PRSS41Q7RTY9 318 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 ZNF547Q8IVP9 402 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 OR9G4Q8NGQ1 327 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 PTH2Q96A98 100 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 RAB37Q96AX2 223 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 TM2D2Q9BX73 214 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 COA3Q9Y2R0 106 aaPredicted RBP9□□□□□ -0.97
LINC00342-202ENST00000448494 TRPM6Q9BX84 2022 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 PCNX3Q9H6A9 2034 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 A0A1W2PRD5 423 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 A0A1W2PRF3 423 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 A0A1W2PRM7 423 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 GAGE12JA6NER3 117 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 M0QXV9 152 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 GAGE7O76087 117 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 IGHV3-7P01780 117 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 IGHMP01871 453 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 GAGE12FP0CL80 117 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 GAGE12GP0CL81 117 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 GAGE12IP0CL82 117 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 OR1D4P47884 311 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 GAGE4Q13068 117 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 Q6ZUT4 128 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 C1QL2Q7Z5L3 287 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 SPACA3Q8IXA5 215 aa9□□□□□ -0.97
LINC00342-202ENST00000448494 H1FXQ92522 213 aaKnown RBP9□□□□□ -0.97
LINC00342-202ENST00000448494 NAT6Q93015 286 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms