RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 ZNF430Q9H8G1 570 aaPredicted RBP13.61□□□□□ -0.23
DDX56-207ENST00000448192 TNCP24821 2201 aa13.61□□□□□ -0.23
DDX56-207ENST00000448192 A0A0A6YYH2 397 aa13.6□□□□□ -0.23
DDX56-207ENST00000448192 A6NJ64 397 aa13.6□□□□□ -0.23
DDX56-207ENST00000448192 NHLRC4P0CG21 123 aaPredicted RBP13.6□□□□□ -0.23
DDX56-207ENST00000448192 ZP3P21754 424 aa13.6□□□□□ -0.23
DDX56-207ENST00000448192 AADACP22760 399 aa13.6□□□□□ -0.23
DDX56-207ENST00000448192 TGFBR1P36897 503 aa13.6□□□□□ -0.23
DDX56-207ENST00000448192 CDK10Q15131 360 aa13.6□□□□□ -0.23
DDX56-207ENST00000448192 TIMM50Q3ZCQ8 353 aa13.6□□□□□ -0.23
DDX56-207ENST00000448192 OR6Q1Q8NGQ2 317 aa13.6□□□□□ -0.23
DDX56-207ENST00000448192 HSD17B10Q99714 261 aaKnown RBP13.6□□□□□ -0.23
DDX56-207ENST00000448192 ASCL2Q99929 193 aa13.6□□□□□ -0.23
DDX56-207ENST00000448192 ELOVL1Q9BW60 279 aa13.6□□□□□ -0.23
DDX56-207ENST00000448192 AUNIPQ9H7T9 357 aa13.6□□□□□ -0.23
DDX56-207ENST00000448192 TAS2R8Q9NYW2 309 aa13.6□□□□□ -0.23
DDX56-207ENST00000448192 SMAD5-AS1Q9Y6J3 95 aa13.6□□□□□ -0.23
DDX56-207ENST00000448192 CREBL2O60519 120 aaPredicted RBP13.59□□□□□ -0.23
DDX56-207ENST00000448192 OR9G9P0C7N8 305 aa13.59□□□□□ -0.23
DDX56-207ENST00000448192 FCGR2CP31995 323 aa13.59□□□□□ -0.23
DDX56-207ENST00000448192 OVCH2Q7RTZ1 564 aa13.59□□□□□ -0.23
DDX56-207ENST00000448192 HOGA1Q86XE5 327 aa13.59□□□□□ -0.23
DDX56-207ENST00000448192 MMD2Q8IY49 270 aa13.59□□□□□ -0.23
DDX56-207ENST00000448192 VKORC1L1Q8N0U8 176 aa13.59□□□□□ -0.23
DDX56-207ENST00000448192 ADAD2Q8NCV1 583 aaKnown RBP13.59□□□□□ -0.23
DDX56-207ENST00000448192 OR4S2Q8NH73 311 aa13.59□□□□□ -0.23
DDX56-207ENST00000448192 SECTM1Q8WVN6 248 aa13.59□□□□□ -0.23
DDX56-207ENST00000448192 GPHA2Q96T91 129 aa13.59□□□□□ -0.23
DDX56-207ENST00000448192 RSRP1Q9BUV0 290 aa13.59□□□□□ -0.23
DDX56-207ENST00000448192 VCX3AQ9NNX9 186 aa13.59□□□□□ -0.23
DDX56-207ENST00000448192 AIREO43918 545 aa13.58□□□□□ -0.24
DDX56-207ENST00000448192 BRI3O95415 125 aa13.58□□□□□ -0.24
DDX56-207ENST00000448192 GP9P14770 177 aa13.58□□□□□ -0.24
DDX56-207ENST00000448192 LSM3P62310 102 aaKnown RBP13.58□□□□□ -0.24
DDX56-207ENST00000448192 C10orf55Q5SWW7 151 aa13.58□□□□□ -0.24
DDX56-207ENST00000448192 HAPLN4Q86UW8 402 aa13.58□□□□□ -0.24
DDX56-207ENST00000448192 MFSD4AQ8N468 514 aa13.58□□□□□ -0.24
DDX56-207ENST00000448192 TSPAN14Q8NG11 270 aa13.58□□□□□ -0.24
DDX56-207ENST00000448192 USMG5Q96IX5 58 aa13.58□□□□□ -0.24
DDX56-207ENST00000448192 SPIN2AQ99865 258 aa13.58□□□□□ -0.24
DDX56-207ENST00000448192 SPIN2BQ9BPZ2 258 aa13.58□□□□□ -0.24
DDX56-207ENST00000448192 CCL28Q9NRJ3 127 aa13.58□□□□□ -0.24
DDX56-207ENST00000448192 PEF1Q9UBV8 284 aaKnown RBP13.58□□□□□ -0.24
DDX56-207ENST00000448192 A0A087WXM4 84 aa13.57□□□□□ -0.24
DDX56-207ENST00000448192 MEIS3P1A6NDR6 274 aa13.57□□□□□ -0.24
DDX56-207ENST00000448192 TNFSF12O43508 249 aa13.57□□□□□ -0.24
DDX56-207ENST00000448192 TMEM127O75204 238 aa13.57□□□□□ -0.24
DDX56-207ENST00000448192 RBMXL2O75526 392 aaKnown RBP13.57□□□□□ -0.24
DDX56-207ENST00000448192 PRH1P02810 166 aa13.57□□□□□ -0.24
DDX56-207ENST00000448192 RPS19P39019 145 aaKnown RBP13.57□□□□□ -0.24
DDX56-207ENST00000448192 EIF4EBP1Q13541 118 aaPredicted RBP13.57□□□□□ -0.24
DDX56-207ENST00000448192 DYRK1AQ13627 763 aa13.57□□□□□ -0.24
DDX56-207ENST00000448192 ZNF343Q6P1L6 599 aa13.57□□□□□ -0.24
DDX56-207ENST00000448192 ZNF66Q6ZN08 573 aa13.57□□□□□ -0.24
DDX56-207ENST00000448192 ANKRD13BQ86YJ7 626 aa13.57□□□□□ -0.24
DDX56-207ENST00000448192 CROCCP3Q8IVE0 287 aa13.57□□□□□ -0.24
DDX56-207ENST00000448192 OR13F1Q8NGS4 319 aa13.57□□□□□ -0.24
DDX56-207ENST00000448192 S100A16Q96FQ6 103 aaKnown RBP13.57□□□□□ -0.24
DDX56-207ENST00000448192 WWC2-AS2Q96NR7 200 aa13.57□□□□□ -0.24
DDX56-207ENST00000448192 U3KQK5 164 aa13.57□□□□□ -0.24
DDX56-207ENST00000448192 HUWE1Q7Z6Z7 4374 aaKnown RBP13.56□□□□□ -0.24
DDX56-207ENST00000448192 OR2A4O95047 310 aa13.56□□□□□ -0.24
DDX56-207ENST00000448192 TNFAIP8O95379 198 aa13.56□□□□□ -0.24
DDX56-207ENST00000448192 TRBV12-3P01733 135 aa13.56□□□□□ -0.24
DDX56-207ENST00000448192 CBX5P45973 191 aa13.56□□□□□ -0.24
DDX56-207ENST00000448192 SYNJ2BPP57105 145 aa13.56□□□□□ -0.24
DDX56-207ENST00000448192 FXYD4P59646 89 aa13.56□□□□□ -0.24
DDX56-207ENST00000448192 RHOGP84095 191 aa13.56□□□□□ -0.24
DDX56-207ENST00000448192 VSTM2AQ8TAG5 236 aa13.56□□□□□ -0.24
DDX56-207ENST00000448192 YIPF6Q96EC8 236 aa13.56□□□□□ -0.24
DDX56-207ENST00000448192 OR2A7Q96R45 310 aa13.56□□□□□ -0.24
DDX56-207ENST00000448192 XRCC3O43542 346 aa13.55□□□□□ -0.24
DDX56-207ENST00000448192 KBTBD11O94819 623 aa13.55□□□□□ -0.24
DDX56-207ENST00000448192 PPYP01298 95 aa13.55□□□□□ -0.24
DDX56-207ENST00000448192 BRWD1-AS2P59051 145 aa13.55□□□□□ -0.24
DDX56-207ENST00000448192 KLF5Q13887 457 aaPredicted RBP13.55□□□□□ -0.24
DDX56-207ENST00000448192 UBE2NLQ5JXB2 153 aa13.55□□□□□ -0.24
DDX56-207ENST00000448192 SSX9Q7RTT3 188 aa13.55□□□□□ -0.24
DDX56-207ENST00000448192 SAMD12Q8N8I0 201 aa13.55□□□□□ -0.24
DDX56-207ENST00000448192 SNAPC3Q92966 411 aa13.55□□□□□ -0.24
DDX56-207ENST00000448192 SLC5A7Q9GZV3 580 aa13.55□□□□□ -0.24
DDX56-207ENST00000448192 AKIP1Q9NQ31 210 aa13.55□□□□□ -0.24
DDX56-207ENST00000448192 IFT46Q9NQC8 304 aa13.55□□□□□ -0.24
DDX56-207ENST00000448192 ADAM30Q9UKF2 790 aa13.55□□□□□ -0.24
DDX56-207ENST00000448192 HMX3A6NHT5 357 aa13.54□□□□□ -0.24
DDX56-207ENST00000448192 FAM223BA6NKX1 122 aa13.54□□□□□ -0.24
DDX56-207ENST00000448192 TRIM64CA6NLI5 447 aa13.54□□□□□ -0.24
DDX56-207ENST00000448192 HRASP01112 189 aa13.54□□□□□ -0.24
DDX56-207ENST00000448192 IGLV1-51P01701 117 aa13.54□□□□□ -0.24
DDX56-207ENST00000448192 KIR2DS2P43631 304 aa13.54□□□□□ -0.24
DDX56-207ENST00000448192 ZNF45Q02386 682 aa13.54□□□□□ -0.24
DDX56-207ENST00000448192 ATP5G2Q06055 141 aa13.54□□□□□ -0.24
DDX56-207ENST00000448192 TATDN3Q17R31 274 aa13.54□□□□□ -0.24
DDX56-207ENST00000448192 RPEL1Q2QD12 228 aa13.54□□□□□ -0.24
DDX56-207ENST00000448192 FAM223AQ8IWN6 122 aa13.54□□□□□ -0.24
DDX56-207ENST00000448192 SPAG16Q8N0X2 631 aa13.54□□□□□ -0.24
DDX56-207ENST00000448192 PUSL1Q8N0Z8 303 aaKnown RBP13.54□□□□□ -0.24
DDX56-207ENST00000448192 TTC9CQ8N5M4 171 aa13.54□□□□□ -0.24
DDX56-207ENST00000448192 OR5AP2Q8NGF4 316 aa13.54□□□□□ -0.24
DDX56-207ENST00000448192 OR9G4Q8NGQ1 327 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms